RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 RPS20P60866 119 aaKnown RBP4.09□□□□□ -1.75
CAPN3-217ENST00000567817 LYZP61626 148 aa4.09□□□□□ -1.75
CAPN3-217ENST00000567817 NUTF2P61970 127 aaKnown RBP4.09□□□□□ -1.75
CAPN3-217ENST00000567817 GAGE1Q13065 139 aa4.09□□□□□ -1.75
CAPN3-217ENST00000567817 GAGE4Q13068 117 aa4.09□□□□□ -1.75
CAPN3-217ENST00000567817 RIGQ13278 110 aa4.09□□□□□ -1.75
CAPN3-217ENST00000567817 EBI3Q14213 229 aa4.09□□□□□ -1.75
CAPN3-217ENST00000567817 FXYD3Q14802 87 aa4.09□□□□□ -1.75
CAPN3-217ENST00000567817 SAPCD1Q5SSQ6 148 aa4.09□□□□□ -1.75
CAPN3-217ENST00000567817 MRPL54Q6P161 138 aaKnown RBP4.09□□□□□ -1.75
CAPN3-217ENST00000567817 ZNF562Q6V9R5 426 aa4.09□□□□□ -1.75
CAPN3-217ENST00000567817 Q86TA4 180 aa4.09□□□□□ -1.75
CAPN3-217ENST00000567817 GATD1Q8NB37 220 aa4.09□□□□□ -1.75
CAPN3-217ENST00000567817 MAPK1IP1LQ8NDC0 245 aa4.09□□□□□ -1.75
CAPN3-217ENST00000567817 C18orf32Q8TCD1 76 aa4.09□□□□□ -1.75
CAPN3-217ENST00000567817 BLNKQ8WV28 456 aa4.09□□□□□ -1.75
CAPN3-217ENST00000567817 RNF125Q96EQ8 232 aa4.09□□□□□ -1.75
CAPN3-217ENST00000567817 ATP6V0BQ99437 205 aa4.09□□□□□ -1.75
CAPN3-217ENST00000567817 NDFIP1Q9BT67 221 aa4.09□□□□□ -1.75
CAPN3-217ENST00000567817 NRN1Q9NPD7 142 aa4.09□□□□□ -1.75
CAPN3-217ENST00000567817 ONECUT1Q9UBC0 465 aa4.09□□□□□ -1.75
CAPN3-217ENST00000567817 TENM1Q9UKZ4 2725 aa4.09□□□□□ -1.75
CAPN3-217ENST00000567817 TRBV19A0A075B6N1 114 aa4.08□□□□□ -1.76
CAPN3-217ENST00000567817 IGHV3-72A0A0B4J1Y9 119 aa4.08□□□□□ -1.76
CAPN3-217ENST00000567817 TMEM89A2RUT3 159 aa4.08□□□□□ -1.76
CAPN3-217ENST00000567817 K7EIM0 57 aa4.08□□□□□ -1.76
CAPN3-217ENST00000567817 CHEK1O14757 476 aa4.08□□□□□ -1.76
CAPN3-217ENST00000567817 CRXO43186 299 aaPredicted RBP4.08□□□□□ -1.76
CAPN3-217ENST00000567817 GNG7O60262 68 aa4.08□□□□□ -1.76
CAPN3-217ENST00000567817 NUPR1O60356 82 aa4.08□□□□□ -1.76
CAPN3-217ENST00000567817 FAM106CPP0CH98 169 aa4.08□□□□□ -1.76
CAPN3-217ENST00000567817 IGLC2P0DOY2 106 aa4.08□□□□□ -1.76
CAPN3-217ENST00000567817 IGHV4-30-4P0DP06 118 aa4.08□□□□□ -1.76
CAPN3-217ENST00000567817 COL8A2P25067 703 aa4.08□□□□□ -1.76
CAPN3-217ENST00000567817 KRTDAPP60985 99 aa4.08□□□□□ -1.76
CAPN3-217ENST00000567817 C5orf64Q2M2E5 130 aa4.08□□□□□ -1.76
CAPN3-217ENST00000567817 KLK9Q2XQG4 91 aa4.08□□□□□ -1.76
CAPN3-217ENST00000567817 PSMG4Q5JS54 123 aa4.08□□□□□ -1.76
CAPN3-217ENST00000567817 FAM120AOSQ5T036 256 aa4.08□□□□□ -1.76
CAPN3-217ENST00000567817 PRR27Q6MZM9 219 aa4.08□□□□□ -1.76
CAPN3-217ENST00000567817 CLEC2AQ6UVW9 174 aa4.08□□□□□ -1.76
CAPN3-217ENST00000567817 C16orf54Q6UWD8 224 aa4.08□□□□□ -1.76
CAPN3-217ENST00000567817 Q6ZTC4 211 aa4.08□□□□□ -1.76
CAPN3-217ENST00000567817 COX8CQ7Z4L0 72 aa4.08□□□□□ -1.76
CAPN3-217ENST00000567817 TTC9CQ8N5M4 171 aa4.08□□□□□ -1.76
CAPN3-217ENST00000567817 VN1R17PQ8TDU5 208 aa4.08□□□□□ -1.76
CAPN3-217ENST00000567817 ARPC1AQ92747 370 aa4.08□□□□□ -1.76
CAPN3-217ENST00000567817 ALKBH7Q9BT30 221 aaPredicted RBP4.08□□□□□ -1.76
CAPN3-217ENST00000567817 FBXL15Q9H469 300 aa4.08□□□□□ -1.76
CAPN3-217ENST00000567817 CLEC5AQ9NY25 188 aa4.08□□□□□ -1.76
CAPN3-217ENST00000567817 C21orf62Q9NYP8 219 aa4.08□□□□□ -1.76
CAPN3-217ENST00000567817 MRPL36Q9P0J6 103 aaKnown RBP4.08□□□□□ -1.76
CAPN3-217ENST00000567817 HSPB8Q9UJY1 196 aa4.08□□□□□ -1.76
CAPN3-217ENST00000567817 KLK9Q9UKQ9 250 aa4.08□□□□□ -1.76
CAPN3-217ENST00000567817 ROS1P08922 2347 aa4.07□□□□□ -1.76
CAPN3-217ENST00000567817 IGLV11-55A0A075B6I3 123 aa4.07□□□□□ -1.76
CAPN3-217ENST00000567817 A0A096LNT2 108 aa4.07□□□□□ -1.76
CAPN3-217ENST00000567817 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.07□□□□□ -1.76
CAPN3-217ENST00000567817 TRAV34A0A0B4J273 112 aa4.07□□□□□ -1.76
CAPN3-217ENST00000567817 A0A1B0GUT8 65 aa4.07□□□□□ -1.76
CAPN3-217ENST00000567817 WI2-2373I1.2A0A1W2PRP0 233 aa4.07□□□□□ -1.76
CAPN3-217ENST00000567817 HSBP1L1C9JCN9 74 aa4.07□□□□□ -1.76
CAPN3-217ENST00000567817 M0R2Z0 102 aa4.07□□□□□ -1.76
CAPN3-217ENST00000567817 SPINK4O60575 86 aa4.07□□□□□ -1.76
CAPN3-217ENST00000567817 CA1P00915 261 aaPredicted RBP4.07□□□□□ -1.76
CAPN3-217ENST00000567817 IGKV1-17P01599 117 aa4.07□□□□□ -1.76
CAPN3-217ENST00000567817 HLA-DRB1P01911 266 aa4.07□□□□□ -1.76
CAPN3-217ENST00000567817 BMI1P35226 326 aa4.07□□□□□ -1.76
CAPN3-217ENST00000567817 GNG5P63218 68 aa4.07□□□□□ -1.76
CAPN3-217ENST00000567817 SLAQ13239 276 aa4.07□□□□□ -1.76
CAPN3-217ENST00000567817 PSG3Q16557 428 aa4.07□□□□□ -1.76
CAPN3-217ENST00000567817 COL5A1-AS1Q5SY13 56 aa4.07□□□□□ -1.76
CAPN3-217ENST00000567817 C11orf71Q6IPW1 123 aa4.07□□□□□ -1.76
CAPN3-217ENST00000567817 SIGLEC15Q6ZMC9 328 aa4.07□□□□□ -1.76
CAPN3-217ENST00000567817 ZNF705AQ6ZN79 300 aaPredicted RBP4.07□□□□□ -1.76
CAPN3-217ENST00000567817 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.07□□□□□ -1.76
CAPN3-217ENST00000567817 ZNF491Q8N8L2 437 aa4.07□□□□□ -1.76
CAPN3-217ENST00000567817 LINC00479Q96M42 142 aa4.07□□□□□ -1.76
CAPN3-217ENST00000567817 LPAR2Q9HBW0 351 aa4.07□□□□□ -1.76
CAPN3-217ENST00000567817 HEATR1Q9H583 2144 aaKnown RBP4.06□□□□□ -1.76
CAPN3-217ENST00000567817 TANC2Q9HCD6 1990 aa4.06□□□□□ -1.76
CAPN3-217ENST00000567817 TRAV9-2A0A087WT02 112 aa4.06□□□□□ -1.76
CAPN3-217ENST00000567817 LOC102724200A0A096LPH7 203 aaPredicted RBP4.06□□□□□ -1.76
CAPN3-217ENST00000567817 A0A1B0GV90 55 aa4.06□□□□□ -1.76
CAPN3-217ENST00000567817 IGHV4-39P01824 125 aa4.06□□□□□ -1.76
CAPN3-217ENST00000567817 IL4P05112 153 aa4.06□□□□□ -1.76
CAPN3-217ENST00000567817 LINC00614P0C842 121 aa4.06□□□□□ -1.76
CAPN3-217ENST00000567817 C3orf79P0CE67 100 aa4.06□□□□□ -1.76
CAPN3-217ENST00000567817 IGHV4-31P0DP07 118 aa4.06□□□□□ -1.76
CAPN3-217ENST00000567817 CNTFRP26992 372 aa4.06□□□□□ -1.76
CAPN3-217ENST00000567817 CTRLP40313 264 aa4.06□□□□□ -1.76
CAPN3-217ENST00000567817 CAMPP49913 170 aa4.06□□□□□ -1.76
CAPN3-217ENST00000567817 SLC35B1P78383 322 aa4.06□□□□□ -1.76
CAPN3-217ENST00000567817 HES1Q14469 280 aa4.06□□□□□ -1.76
CAPN3-217ENST00000567817 SPATA45Q537H7 98 aa4.06□□□□□ -1.76
CAPN3-217ENST00000567817 Q56UQ5 140 aa4.06□□□□□ -1.76
CAPN3-217ENST00000567817 SERTAD4-AS1Q5TG53 156 aa4.06□□□□□ -1.76
CAPN3-217ENST00000567817 RNASEKQ6P5S7 137 aaKnown RBP4.06□□□□□ -1.76
CAPN3-217ENST00000567817 PET117Q6UWS5 81 aa4.06□□□□□ -1.76
CAPN3-217ENST00000567817 ZNF493Q6ZR52 646 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms