RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 VAMP3Q15836 100 aa12.9□□□□□ -0.34
CMTM3-213ENST00000566756 BOD1L2Q8IYS8 172 aa12.9□□□□□ -0.34
CMTM3-213ENST00000566756 OR9G4Q8NGQ1 327 aa12.9□□□□□ -0.34
CMTM3-213ENST00000566756 OR4C5Q8NGB2 326 aa12.9□□□□□ -0.34
CMTM3-213ENST00000566756 USP9YO00507 2555 aaPredicted RBP12.9□□□□□ -0.34
CMTM3-213ENST00000566756 ECSCRQ19T08 205 aa12.89□□□□□ -0.35
CMTM3-213ENST00000566756 CCDC140Q96MF4 163 aa12.89□□□□□ -0.35
CMTM3-213ENST00000566756 U3KQE9 123 aa12.89□□□□□ -0.35
CMTM3-213ENST00000566756 CENPVL3A0A0U1RRI6 287 aa12.89□□□□□ -0.35
CMTM3-213ENST00000566756 SAA4P35542 130 aa12.89□□□□□ -0.35
CMTM3-213ENST00000566756 CACNG7P62955 275 aa12.89□□□□□ -0.35
CMTM3-213ENST00000566756 ANKRD39Q53RE8 183 aa12.89□□□□□ -0.35
CMTM3-213ENST00000566756 TMEM97Q5BJF2 176 aa12.89□□□□□ -0.35
CMTM3-213ENST00000566756 IGFL4Q6B9Z1 124 aa12.89□□□□□ -0.35
CMTM3-213ENST00000566756 ANKRD17O75179 2603 aaKnown RBP12.88□□□□□ -0.35
CMTM3-213ENST00000566756 NPFFO15130 113 aa12.88□□□□□ -0.35
CMTM3-213ENST00000566756 FCER1GP30273 86 aa12.88□□□□□ -0.35
CMTM3-213ENST00000566756 METTL26Q96S19 204 aa12.88□□□□□ -0.35
CMTM3-213ENST00000566756 PEF1Q9UBV8 284 aaKnown RBP12.88□□□□□ -0.35
CMTM3-213ENST00000566756 CRYBG3Q68DQ2 2970 aa12.87□□□□□ -0.35
CMTM3-213ENST00000566756 PRSS47A8MTI9 375 aa12.87□□□□□ -0.35
CMTM3-213ENST00000566756 PRAC2D3DTV9 90 aa12.87□□□□□ -0.35
CMTM3-213ENST00000566756 SMAD7O15105 426 aaKnown RBP12.87□□□□□ -0.35
CMTM3-213ENST00000566756 MSMBP08118 114 aa12.87□□□□□ -0.35
CMTM3-213ENST00000566756 PLA2G2AP14555 144 aa12.87□□□□□ -0.35
CMTM3-213ENST00000566756 ERCC8Q13216 396 aa12.87□□□□□ -0.35
CMTM3-213ENST00000566756 PRSS57Q6UWY2 283 aa12.87□□□□□ -0.35
CMTM3-213ENST00000566756 BEX4Q9NWD9 120 aaPredicted RBP12.87□□□□□ -0.35
CMTM3-213ENST00000566756 ASH1LQ9NR48 2969 aaKnown RBP12.87□□□□□ -0.35
CMTM3-213ENST00000566756 B4DSR2 109 aa12.87□□□□□ -0.35
CMTM3-213ENST00000566756 SMKR1H3BMG3 65 aa12.87□□□□□ -0.35
CMTM3-213ENST00000566756 CRIP2P52943 208 aaPredicted RBP12.87□□□□□ -0.35
CMTM3-213ENST00000566756 C9orf47Q6ZRZ4 202 aa12.87□□□□□ -0.35
CMTM3-213ENST00000566756 LRRC75A-AS1Q8N1F1 130 aa12.87□□□□□ -0.35
CMTM3-213ENST00000566756 OR4X2Q8NGF9 303 aa12.87□□□□□ -0.35
CMTM3-213ENST00000566756 J3QKU1 62 aa12.86□□□□□ -0.35
CMTM3-213ENST00000566756 TNFRSF6BO95407 300 aa12.86□□□□□ -0.35
CMTM3-213ENST00000566756 GATA3P23771 443 aa12.86□□□□□ -0.35
CMTM3-213ENST00000566756 TMEM78Q5T7P6 136 aa12.86□□□□□ -0.35
CMTM3-213ENST00000566756 CLEC19AQ6UXS0 136 aa12.86□□□□□ -0.35
CMTM3-213ENST00000566756 IL17RELQ6ZVW7 336 aa12.86□□□□□ -0.35
CMTM3-213ENST00000566756 AGPAT4-IT1Q9H0P7 198 aa12.86□□□□□ -0.35
CMTM3-213ENST00000566756 MSRB1Q9NZV6 116 aa12.86□□□□□ -0.35
CMTM3-213ENST00000566756 LENEPQ9Y5L5 61 aa12.86□□□□□ -0.35
CMTM3-213ENST00000566756 PTPN13Q12923 2485 aa12.86□□□□□ -0.35
CMTM3-213ENST00000566756 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.85□□□□□ -0.354e-6■■□□□ 13.3
CMTM3-213ENST00000566756 IGHV4-4A0A075B6R2 117 aa12.85□□□□□ -0.35
CMTM3-213ENST00000566756 TRAV8-2A0A0B4J237 113 aa12.85□□□□□ -0.35
CMTM3-213ENST00000566756 HSD52Q0P140 79 aa12.85□□□□□ -0.35
CMTM3-213ENST00000566756 SMIM15Q7Z3B0 74 aa12.85□□□□□ -0.35
CMTM3-213ENST00000566756 C5orf56Q8N8D9 126 aa12.85□□□□□ -0.35
CMTM3-213ENST00000566756 ZMAT4Q9H898 229 aa12.85□□□□□ -0.35
CMTM3-213ENST00000566756 A0A096LNT2 108 aa12.85□□□□□ -0.35
CMTM3-213ENST00000566756 IGHV1-69DA0A0B4J2H0 117 aa12.85□□□□□ -0.35
CMTM3-213ENST00000566756 IGKV3D-20A0A0C4DH25 116 aa12.85□□□□□ -0.35
CMTM3-213ENST00000566756 IGHV3-35A0A0C4DH35 117 aa12.85□□□□□ -0.35
CMTM3-213ENST00000566756 FAM223BA6NKX1 122 aa12.85□□□□□ -0.35
CMTM3-213ENST00000566756 IGHV1-69P01742 117 aa12.85□□□□□ -0.35
CMTM3-213ENST00000566756 FAM223AQ8IWN6 122 aa12.85□□□□□ -0.35
CMTM3-213ENST00000566756 Q8N8P6 123 aa12.85□□□□□ -0.35
CMTM3-213ENST00000566756 IGHV3OR16-8A0A075B7F1 116 aa12.84□□□□□ -0.35
CMTM3-213ENST00000566756 A6NDN8 102 aa12.84□□□□□ -0.35
CMTM3-213ENST00000566756 KRTAP10-9P60411 292 aa12.84□□□□□ -0.35
CMTM3-213ENST00000566756 C19orf54Q5BKX5 351 aa12.84□□□□□ -0.35
CMTM3-213ENST00000566756 RNF182Q8N6D2 247 aa12.84□□□□□ -0.35
CMTM3-213ENST00000566756 SMPXQ9UHP9 88 aa12.84□□□□□ -0.35
CMTM3-213ENST00000566756 ATP5G2Q06055 141 aa12.83□□□□□ -0.35
CMTM3-213ENST00000566756 C8orf86Q6ZUL3 223 aa12.83□□□□□ -0.35
CMTM3-213ENST00000566756 RNASE8Q8TDE3 154 aaKnown RBP12.83□□□□□ -0.35
CMTM3-213ENST00000566756 C7orf71A4D174 169 aa12.83□□□□□ -0.36
CMTM3-213ENST00000566756 G3V318 75 aa12.83□□□□□ -0.36
CMTM3-213ENST00000566756 H3BRM9 83 aa12.83□□□□□ -0.36
CMTM3-213ENST00000566756 SNAI2O43623 268 aa12.83□□□□□ -0.36
CMTM3-213ENST00000566756 DEFB113Q30KQ7 82 aa12.83□□□□□ -0.36
CMTM3-213ENST00000566756 FBN2P35556 2912 aa12.82□□□□□ -0.36
CMTM3-213ENST00000566756 IGLV2-18A0A075B6J9 118 aa12.82□□□□□ -0.36
CMTM3-213ENST00000566756 CBY3A6NI87 242 aa12.82□□□□□ -0.36
CMTM3-213ENST00000566756 ATP5LO75964 103 aa12.82□□□□□ -0.36
CMTM3-213ENST00000566756 LEPP41159 167 aa12.82□□□□□ -0.36
CMTM3-213ENST00000566756 RBX1P62877 108 aa12.82□□□□□ -0.36
CMTM3-213ENST00000566756 MEGF9Q9H1U4 602 aa12.82□□□□□ -0.36
CMTM3-213ENST00000566756 MOB4Q9Y3A3 225 aa12.82□□□□□ -0.36
CMTM3-213ENST00000566756 IGHV7-4-1A0A0J9YVY3 117 aa12.81□□□□□ -0.36
CMTM3-213ENST00000566756 BRI3O95415 125 aa12.81□□□□□ -0.36
CMTM3-213ENST00000566756 CDKN1BP46527 198 aa12.81□□□□□ -0.36
CMTM3-213ENST00000566756 ODF1Q14990 250 aa12.81□□□□□ -0.36
CMTM3-213ENST00000566756 AMMECR1LQ6DCA0 310 aa12.81□□□□□ -0.36
CMTM3-213ENST00000566756 ADAMTSL5Q6ZMM2 481 aa12.81□□□□□ -0.36
CMTM3-213ENST00000566756 C9orf139Q6ZV77 190 aa12.81□□□□□ -0.36
CMTM3-213ENST00000566756 C11orf21Q9P2W6 132 aa12.81□□□□□ -0.36
CMTM3-213ENST00000566756 DOPEY2Q9Y3R5 2298 aa12.81□□□□□ -0.36
CMTM3-213ENST00000566756 TRAV40A0A0B4J280 105 aa12.81□□□□□ -0.36
CMTM3-213ENST00000566756 HLA-DRB4P13762 266 aa12.81□□□□□ -0.36
CMTM3-213ENST00000566756 FXYD7P58549 80 aa12.81□□□□□ -0.36
CMTM3-213ENST00000566756 KIR3DS1Q14943 382 aa12.81□□□□□ -0.36
CMTM3-213ENST00000566756 LINC01356Q8N9X3 169 aa12.81□□□□□ -0.36
CMTM3-213ENST00000566756 OR2K2Q8NGT1 345 aa12.81□□□□□ -0.36
CMTM3-213ENST00000566756 HLA-DRB4X5D2U9 266 aa12.81□□□□□ -0.36
CMTM3-213ENST00000566756 TRAV41A0A0B4J266 112 aa12.8□□□□□ -0.36
CMTM3-213ENST00000566756 EVI2AP22794 236 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 171.2 ms