RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 NXT2Q9NPJ8 142 aaKnown RBP10.98□□□□□ -0.65
CDH1-209ENST00000566510 HIVEP3Q5T1R4 2406 aa10.98□□□□□ -0.65
CDH1-209ENST00000566510 IGKV3D-20A0A0C4DH25 116 aa10.98□□□□□ -0.65
CDH1-209ENST00000566510 C9orf118A6NHY6 69 aa10.98□□□□□ -0.65
CDH1-209ENST00000566510 FCER1GP30273 86 aa10.98□□□□□ -0.65
CDH1-209ENST00000566510 SAA4P35542 130 aa10.98□□□□□ -0.65
CDH1-209ENST00000566510 FOXC2Q99958 501 aa10.98□□□□□ -0.65
CDH1-209ENST00000566510 A0A0G2JLM5 398 aa10.97□□□□□ -0.65
CDH1-209ENST00000566510 H3BRM9 83 aa10.97□□□□□ -0.65
CDH1-209ENST00000566510 RAB9AP51151 201 aa10.97□□□□□ -0.65
CDH1-209ENST00000566510 LINC01559Q495D7 138 aa10.97□□□□□ -0.65
CDH1-209ENST00000566510 ADAMTSL5Q6ZMM2 481 aa10.97□□□□□ -0.65
CDH1-209ENST00000566510 Q6ZQT7 251 aa10.97□□□□□ -0.65
CDH1-209ENST00000566510 GTF2H5Q6ZYL4 71 aa10.97□□□□□ -0.65
CDH1-209ENST00000566510 OR4X2Q8NGF9 303 aa10.97□□□□□ -0.65
CDH1-209ENST00000566510 CCDC140Q96MF4 163 aa10.97□□□□□ -0.65
CDH1-209ENST00000566510 SIRPDQ9H106 197 aa10.97□□□□□ -0.65
CDH1-209ENST00000566510 C11orf21Q9P2W6 132 aa10.97□□□□□ -0.65
CDH1-209ENST00000566510 SMIM15Q7Z3B0 74 aa10.97□□□□□ -0.65
CDH1-209ENST00000566510 JMJD8Q96S16 334 aa10.97□□□□□ -0.65
CDH1-209ENST00000566510 SLC50A1Q9BRV3 221 aa10.97□□□□□ -0.65
CDH1-209ENST00000566510 CNFNQ9BYD5 112 aa10.97□□□□□ -0.65
CDH1-209ENST00000566510 LINC00527Q9UJ94 153 aa10.97□□□□□ -0.65
CDH1-209ENST00000566510 IGKV2D-26A0A0A0MRZ7 120 aa10.96□□□□□ -0.65
CDH1-209ENST00000566510 GCSHP23434 173 aa10.96□□□□□ -0.65
CDH1-209ENST00000566510 SRSF2Q01130 221 aaKnown RBP10.96□□□□□ -0.65
CDH1-209ENST00000566510 METTL26Q96S19 204 aa10.96□□□□□ -0.65
CDH1-209ENST00000566510 UBTD1Q9HAC8 227 aa10.96□□□□□ -0.65
CDH1-209ENST00000566510 CLPSL1A2RUU4 121 aa10.96□□□□□ -0.66
CDH1-209ENST00000566510 ODF1Q14990 250 aa10.96□□□□□ -0.66
CDH1-209ENST00000566510 SPANXN1Q5VSR9 72 aa10.96□□□□□ -0.66
CDH1-209ENST00000566510 GTSCR1Q86UQ5 136 aa10.96□□□□□ -0.66
CDH1-209ENST00000566510 SIVA1O15304 175 aa10.95□□□□□ -0.66
CDH1-209ENST00000566510 TMEM219Q86XT9 240 aa10.95□□□□□ -0.66
CDH1-209ENST00000566510 EEF1AKMT3Q96AZ1 226 aa10.95□□□□□ -0.66
CDH1-209ENST00000566510 TMEM160Q9NX00 188 aa10.95□□□□□ -0.66
CDH1-209ENST00000566510 VPS13CQ709C8 3753 aa10.95□□□□□ -0.66
CDH1-209ENST00000566510 A0A1W2PPR1 153 aa10.95□□□□□ -0.66
CDH1-209ENST00000566510 IGKCP01834 107 aa10.95□□□□□ -0.66
CDH1-209ENST00000566510 UBE2E1P51965 193 aa10.95□□□□□ -0.66
CDH1-209ENST00000566510 C8orf86Q6ZUL3 223 aa10.95□□□□□ -0.66
CDH1-209ENST00000566510 OR2K2Q8NGT1 345 aa10.95□□□□□ -0.66
CDH1-209ENST00000566510 RAXQ9Y2V3 346 aa10.95□□□□□ -0.66
CDH1-209ENST00000566510 IGHV3OR16-10A0A075B7F0 116 aa10.94□□□□□ -0.66
CDH1-209ENST00000566510 RBAKDNA6NC62 111 aa10.94□□□□□ -0.66
CDH1-209ENST00000566510 K7ERU9 68 aa10.94□□□□□ -0.66
CDH1-209ENST00000566510 KLRB1Q12918 225 aa10.94□□□□□ -0.66
CDH1-209ENST00000566510 TMEM8BA6NDV4 472 aa10.94□□□□□ -0.66
CDH1-209ENST00000566510 SMIM17P0DL12 118 aa10.94□□□□□ -0.66
CDH1-209ENST00000566510 C16orf92Q96LL3 132 aa10.94□□□□□ -0.66
CDH1-209ENST00000566510 TRAV8-2A0A0B4J237 113 aa10.93□□□□□ -0.66
CDH1-209ENST00000566510 SAP30O75446 220 aa10.93□□□□□ -0.66
CDH1-209ENST00000566510 ZC2HC1BQ5TFG8 222 aa10.93□□□□□ -0.66
CDH1-209ENST00000566510 Q8N8P6 123 aa10.93□□□□□ -0.66
CDH1-209ENST00000566510 HHLA3Q9XRX5 114 aa10.93□□□□□ -0.66
CDH1-209ENST00000566510 SPTBN4Q9H254 2564 aa10.93□□□□□ -0.66
CDH1-209ENST00000566510 NCOR2Q9Y618 2525 aa10.93□□□□□ -0.66
CDH1-209ENST00000566510 TRAV40A0A0B4J280 105 aa10.93□□□□□ -0.66
CDH1-209ENST00000566510 MYOZ3Q8TDC0 251 aa10.93□□□□□ -0.66
CDH1-209ENST00000566510 COL12A1Q99715 3063 aa10.93□□□□□ -0.66
CDH1-209ENST00000566510 H3BVH4 76 aa10.92□□□□□ -0.66
CDH1-209ENST00000566510 SPRY2O43597 315 aa10.92□□□□□ -0.66
CDH1-209ENST00000566510 DPM2O94777 84 aa10.92□□□□□ -0.66
CDH1-209ENST00000566510 ATP5G2Q06055 141 aa10.92□□□□□ -0.66
CDH1-209ENST00000566510 AJUBAQ96IF1 538 aa10.92□□□□□ -0.66
CDH1-209ENST00000566510 PSMG3-AS1Q96PY0 264 aa10.92□□□□□ -0.66
CDH1-209ENST00000566510 BPESC1Q9GZL8 116 aa10.92□□□□□ -0.66
CDH1-209ENST00000566510 CHD8Q9HCK8 2581 aa10.92□□□□□ -0.66
CDH1-209ENST00000566510 TRBV7-1A0A0A6YYK4 115 aa10.92□□□□□ -0.66
CDH1-209ENST00000566510 SMIM13P0DJ93 91 aa10.92□□□□□ -0.66
CDH1-209ENST00000566510 LAGE3Q14657 143 aa10.92□□□□□ -0.66
CDH1-209ENST00000566510 MEGF9Q9H1U4 602 aa10.92□□□□□ -0.66
CDH1-209ENST00000566510 SPCS1Q9Y6A9 102 aa10.92□□□□□ -0.66
CDH1-209ENST00000566510 IGHV7-4-1A0A0J9YVY3 117 aa10.91□□□□□ -0.66
CDH1-209ENST00000566510 CENPVL3A0A0U1RRI6 287 aa10.91□□□□□ -0.66
CDH1-209ENST00000566510 K7EMI3 77 aa10.91□□□□□ -0.66
CDH1-209ENST00000566510 K7EP34 96 aa10.91□□□□□ -0.66
CDH1-209ENST00000566510 COTL1Q14019 142 aa10.91□□□□□ -0.66
CDH1-209ENST00000566510 UFSP1Q6NVU6 142 aa10.91□□□□□ -0.66
CDH1-209ENST00000566510 CHAC1Q9BUX1 264 aa10.91□□□□□ -0.66
CDH1-209ENST00000566510 MRPL35Q9NZE8 188 aaKnown RBP10.91□□□□□ -0.66
CDH1-209ENST00000566510 A0A1W2PPM0 123 aa10.91□□□□□ -0.66
CDH1-209ENST00000566510 ATP5LO75964 103 aa10.91□□□□□ -0.66
CDH1-209ENST00000566510 IGF1P05019 195 aa10.91□□□□□ -0.66
CDH1-209ENST00000566510 FXYD2P54710 66 aa10.91□□□□□ -0.66
CDH1-209ENST00000566510 NPFFR1Q9GZQ6 430 aa10.91□□□□□ -0.66
CDH1-209ENST00000566510 KLK15Q9H2R5 256 aa10.91□□□□□ -0.66
CDH1-209ENST00000566510 AGRNO00468 2067 aa10.9□□□□□ -0.66
CDH1-209ENST00000566510 LINC01546A6NGU7 62 aa10.9□□□□□ -0.66
CDH1-209ENST00000566510 K7ERJ3 54 aa10.9□□□□□ -0.66
CDH1-209ENST00000566510 NPFFO15130 113 aa10.9□□□□□ -0.66
CDH1-209ENST00000566510 EFNA4P52798 201 aa10.9□□□□□ -0.66
CDH1-209ENST00000566510 RPL11P62913 178 aaKnown RBP10.9□□□□□ -0.66
CDH1-209ENST00000566510 ZMAT4Q9H898 229 aa10.9□□□□□ -0.66
CDH1-209ENST00000566510 HIF1ANQ9NWT6 349 aa10.9□□□□□ -0.66
CDH1-209ENST00000566510 IGLV2-18A0A075B6J9 118 aa10.9□□□□□ -0.67
CDH1-209ENST00000566510 M0R381 172 aa10.9□□□□□ -0.67
CDH1-209ENST00000566510 IGKV3-7A0A075B6H7 116 aa10.89□□□□□ -0.67
CDH1-209ENST00000566510 TRBV25-1A0A075B6N4 114 aa10.89□□□□□ -0.67
CDH1-209ENST00000566510 FABP2P12104 132 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms