RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 RBAKDNA6NC62 111 aa4.43□□□□□ -1.7
TCF4-228ENST00000565393 EIF3GO75821 320 aaKnown RBP eCLIP4.43□□□□□ -1.7
TCF4-228ENST00000565393 UBE2L3P68036 154 aaKnown RBP4.43□□□□□ -1.7
TCF4-228ENST00000565393 ZNF415Q09FC8 603 aa4.43□□□□□ -1.7
TCF4-228ENST00000565393 MRPL23Q16540 153 aaKnown RBP4.43□□□□□ -1.7
TCF4-228ENST00000565393 ACOT6Q3I5F7 207 aaPredicted RBP4.43□□□□□ -1.7
TCF4-228ENST00000565393 KHDC3LQ587J8 217 aa4.43□□□□□ -1.7
TCF4-228ENST00000565393 PRR9Q5T870 116 aa4.43□□□□□ -1.7
TCF4-228ENST00000565393 SPATA12Q7Z6I5 190 aa4.43□□□□□ -1.7
TCF4-228ENST00000565393 ST6GAL2Q96JF0 529 aa4.43□□□□□ -1.7
TCF4-228ENST00000565393 C18orf15Q96N68 181 aa4.43□□□□□ -1.7
TCF4-228ENST00000565393 C8orf49Q96NF6 230 aa4.43□□□□□ -1.7
TCF4-228ENST00000565393 UPK3BQ9BT76 320 aa4.43□□□□□ -1.7
TCF4-228ENST00000565393 PTTG2Q9NZH5 202 aa4.43□□□□□ -1.7
TCF4-228ENST00000565393 PRO0255Q9UI72 69 aa4.43□□□□□ -1.7
TCF4-228ENST00000565393 NAGKQ9UJ70 344 aa4.43□□□□□ -1.7
TCF4-228ENST00000565393 MRPS16Q9Y3D3 137 aaKnown RBP4.43□□□□□ -1.7
TCF4-228ENST00000565393 HSPB11Q9Y547 144 aa4.43□□□□□ -1.7
TCF4-228ENST00000565393 TRAV9-2A0A087WT02 112 aa4.42□□□□□ -1.7
TCF4-228ENST00000565393 TRBV7-9A0A0J9YWB2 115 aa4.42□□□□□ -1.7
TCF4-228ENST00000565393 A0A1W2PPQ1 181 aa4.42□□□□□ -1.7
TCF4-228ENST00000565393 DIRC3C9JPN6 131 aa4.42□□□□□ -1.7
TCF4-228ENST00000565393 SIVA1O15304 175 aa4.42□□□□□ -1.7
TCF4-228ENST00000565393 HMGB3O15347 200 aaKnown RBP4.42□□□□□ -1.7
TCF4-228ENST00000565393 GNRH2O43555 120 aa4.42□□□□□ -1.7
TCF4-228ENST00000565393 CRYBA4P53673 196 aa4.42□□□□□ -1.7
TCF4-228ENST00000565393 FHL2Q14192 279 aa4.42□□□□□ -1.7
TCF4-228ENST00000565393 ZNF266Q14584 549 aa4.42□□□□□ -1.7
TCF4-228ENST00000565393 TMEM183BQ1AE95 376 aa4.42□□□□□ -1.7
TCF4-228ENST00000565393 LYPD5Q6UWN5 251 aa4.42□□□□□ -1.7
TCF4-228ENST00000565393 NEGR1Q7Z3B1 354 aa4.42□□□□□ -1.7
TCF4-228ENST00000565393 TMEM183AQ8IXX5 376 aa4.42□□□□□ -1.7
TCF4-228ENST00000565393 OR10G4Q8NGN3 311 aa4.42□□□□□ -1.7
TCF4-228ENST00000565393 OR10G9Q8NGN4 311 aa4.42□□□□□ -1.7
TCF4-228ENST00000565393 OR10G7Q8NGN6 311 aa4.42□□□□□ -1.7
TCF4-228ENST00000565393 SPXQ9BT56 116 aa4.42□□□□□ -1.7
TCF4-228ENST00000565393 WFDC1Q9HC57 220 aa4.42□□□□□ -1.7
TCF4-228ENST00000565393 TRGV11A0A075B6L2 103 aa4.41□□□□□ -1.7
TCF4-228ENST00000565393 A0A1B0GVG6 124 aa4.41□□□□□ -1.7
TCF4-228ENST00000565393 EREGO14944 169 aa4.41□□□□□ -1.7
TCF4-228ENST00000565393 NXPH4O95158 308 aa4.41□□□□□ -1.7
TCF4-228ENST00000565393 SFTA3P0C7M3 94 aa4.41□□□□□ -1.7
TCF4-228ENST00000565393 GOLT1AQ6ZVE7 132 aa4.41□□□□□ -1.7
TCF4-228ENST00000565393 MAPKAPK5-AS1Q8N8E1 139 aa4.41□□□□□ -1.7
TCF4-228ENST00000565393 OR4C5Q8NGB2 326 aa4.41□□□□□ -1.7
TCF4-228ENST00000565393 PCNPQ8WW12 178 aaKnown RBP4.41□□□□□ -1.7
TCF4-228ENST00000565393 ZNF479Q96JC4 524 aa4.41□□□□□ -1.7
TCF4-228ENST00000565393 SGK494Q96LW2 274 aa4.41□□□□□ -1.7
TCF4-228ENST00000565393 LYSTQ99698 3801 aa4.41□□□□□ -1.7
TCF4-228ENST00000565393 KRTAP1-5Q9BYS1 174 aa4.41□□□□□ -1.7
TCF4-228ENST00000565393 TREM1Q9NP99 234 aa4.41□□□□□ -1.7
TCF4-228ENST00000565393 OTORQ9NRC9 128 aa4.41□□□□□ -1.7
TCF4-228ENST00000565393 LENEPQ9Y5L5 61 aa4.41□□□□□ -1.7
TCF4-228ENST00000565393 TNFRSF18Q9Y5U5 241 aa4.41□□□□□ -1.7
TCF4-228ENST00000565393 TRAV21A0A0B4J279 112 aa4.4□□□□□ -1.71
TCF4-228ENST00000565393 F6UZH7 168 aa4.4□□□□□ -1.71
TCF4-228ENST00000565393 ORM1P02763 201 aa4.4□□□□□ -1.71
TCF4-228ENST00000565393 GYPEP15421 78 aa4.4□□□□□ -1.71
TCF4-228ENST00000565393 BTF3P20290 206 aaKnown RBP4.4□□□□□ -1.71
TCF4-228ENST00000565393 SRIP30626 198 aa4.4□□□□□ -1.71
TCF4-228ENST00000565393 LINC00315P59091 139 aa4.4□□□□□ -1.71
TCF4-228ENST00000565393 RAB2AP61019 212 aa4.4□□□□□ -1.71
TCF4-228ENST00000565393 GNG5P63218 68 aa4.4□□□□□ -1.71
TCF4-228ENST00000565393 Q6AWC8 147 aa4.4□□□□□ -1.71
TCF4-228ENST00000565393 PQLC2Q6ZP29 291 aa4.4□□□□□ -1.71
TCF4-228ENST00000565393 HSD17B11Q8NBQ5 300 aa4.4□□□□□ -1.71
TCF4-228ENST00000565393 RASL10AQ92737 203 aa4.4□□□□□ -1.71
TCF4-228ENST00000565393 NDFIP1Q9BT67 221 aa4.4□□□□□ -1.71
TCF4-228ENST00000565393 MED28Q9H204 178 aa4.4□□□□□ -1.71
TCF4-228ENST00000565393 SDF2L1Q9HCN8 221 aa4.4□□□□□ -1.71
TCF4-228ENST00000565393 TRAV8-1A0A0A6YYK1 113 aa4.39□□□□□ -1.71
TCF4-228ENST00000565393 IGHV3-16A0A0C4DH30 117 aa4.39□□□□□ -1.71
TCF4-228ENST00000565393 C9JCJ5 164 aa4.39□□□□□ -1.71
TCF4-228ENST00000565393 K7EQD1 137 aa4.39□□□□□ -1.71
TCF4-228ENST00000565393 K7EQM0 130 aa4.39□□□□□ -1.71
TCF4-228ENST00000565393 M0R2P5 195 aa4.39□□□□□ -1.71
TCF4-228ENST00000565393 CDK2AP2O75956 126 aa4.39□□□□□ -1.71
TCF4-228ENST00000565393 EVI2AP22794 236 aa4.39□□□□□ -1.71
TCF4-228ENST00000565393 KRTAP10-2P60368 255 aa4.39□□□□□ -1.71
TCF4-228ENST00000565393 SUMO1P63165 101 aaKnown RBP4.39□□□□□ -1.71
TCF4-228ENST00000565393 NFE4Q86UQ8 179 aa4.39□□□□□ -1.71
TCF4-228ENST00000565393 NHLRC2Q8NBF2 726 aa4.39□□□□□ -1.71
TCF4-228ENST00000565393 TMED6Q8WW62 240 aa4.39□□□□□ -1.71
TCF4-228ENST00000565393 ASB13Q8WXK3 278 aa4.39□□□□□ -1.71
TCF4-228ENST00000565393 KCNS1Q96KK3 526 aa4.39□□□□□ -1.71
TCF4-228ENST00000565393 TXNDC17Q9BRA2 123 aa4.39□□□□□ -1.71
TCF4-228ENST00000565393 KRTAP4-5Q9BYR2 181 aa4.39□□□□□ -1.71
TCF4-228ENST00000565393 PGPEP1Q9NXJ5 209 aa4.39□□□□□ -1.71
TCF4-228ENST00000565393 ALG5Q9Y673 324 aa4.39□□□□□ -1.71
TCF4-228ENST00000565393 LY96Q9Y6Y9 160 aa4.39□□□□□ -1.71
TCF4-228ENST00000565393 SACSQ9NZJ4 4579 aa4.39□□□□□ -1.71
TCF4-228ENST00000565393 IGHV3-73A0A0B4J1V6 119 aa4.38□□□□□ -1.71
TCF4-228ENST00000565393 TRAV4A0A0B4J268 109 aa4.38□□□□□ -1.71
TCF4-228ENST00000565393 TAAR5O14804 337 aa4.38□□□□□ -1.71
TCF4-228ENST00000565393 MBP02144 154 aa4.38□□□□□ -1.71
TCF4-228ENST00000565393 ARL14EPLP0DKL9 152 aa4.38□□□□□ -1.71
TCF4-228ENST00000565393 FUSP35637 526 aaKnown RBP eCLIP4.38□□□□□ -1.71
TCF4-228ENST00000565393 CDC34P49427 236 aaPredicted RBP4.38□□□□□ -1.71
TCF4-228ENST00000565393 ERVFC1-1P60608 527 aa4.38□□□□□ -1.71
TCF4-228ENST00000565393 TDRG1Q3Y452 100 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms