RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 NMUP48645 174 aa11.93□□□□□ -0.5
GTF3C1-205ENST00000564747 SRSF2Q01130 221 aaKnown RBP11.93□□□□□ -0.5
GTF3C1-205ENST00000564747 PCP2Q8IVA1 136 aa11.93□□□□□ -0.5
GTF3C1-205ENST00000564747 OR4X2Q8NGF9 303 aa11.93□□□□□ -0.5
GTF3C1-205ENST00000564747 OR2K2Q8NGT1 345 aa11.93□□□□□ -0.5
GTF3C1-205ENST00000564747 RAB37Q96AX2 223 aa11.93□□□□□ -0.5
GTF3C1-205ENST00000564747 MAP1LC3AQ9H492 121 aa11.93□□□□□ -0.5
GTF3C1-205ENST00000564747 SIVA1O15304 175 aa11.93□□□□□ -0.5
GTF3C1-205ENST00000564747 ZNF207O43670 478 aaKnown RBP11.93□□□□□ -0.5
GTF3C1-205ENST00000564747 ADAMTSL5Q6ZMM2 481 aa11.93□□□□□ -0.5
GTF3C1-205ENST00000564747 CCDC140Q96MF4 163 aa11.93□□□□□ -0.5
GTF3C1-205ENST00000564747 C11orf21Q9P2W6 132 aa11.93□□□□□ -0.5
GTF3C1-205ENST00000564747 TNFRSF6BO95407 300 aa11.92□□□□□ -0.5
GTF3C1-205ENST00000564747 LEPP41159 167 aa11.92□□□□□ -0.5
GTF3C1-205ENST00000564747 RIPPLY3P57055 190 aa11.92□□□□□ -0.5
GTF3C1-205ENST00000564747 LINC01559Q495D7 138 aa11.92□□□□□ -0.5
GTF3C1-205ENST00000564747 AGPAT4-IT1Q9H0P7 198 aa11.92□□□□□ -0.5
GTF3C1-205ENST00000564747 IGKV3D-20A0A0C4DH25 116 aa11.92□□□□□ -0.5
GTF3C1-205ENST00000564747 GOSR1O95249 250 aa11.92□□□□□ -0.5
GTF3C1-205ENST00000564747 DTX2Q86UW9 622 aa11.91□□□□□ -0.5
GTF3C1-205ENST00000564747 SAA4P35542 130 aa11.91□□□□□ -0.5
GTF3C1-205ENST00000564747 UBE2E1P51965 193 aa11.9□□□□□ -0.5
GTF3C1-205ENST00000564747 KLRB1Q12918 225 aa11.9□□□□□ -0.5
GTF3C1-205ENST00000564747 Q6ZQT7 251 aa11.9□□□□□ -0.5
GTF3C1-205ENST00000564747 RAXQ9Y2V3 346 aa11.9□□□□□ -0.5
GTF3C1-205ENST00000564747 TRAV8-2A0A0B4J237 113 aa11.9□□□□□ -0.51
GTF3C1-205ENST00000564747 G3V4G9 280 aa11.9□□□□□ -0.51
GTF3C1-205ENST00000564747 TRGV3P03979 118 aa11.9□□□□□ -0.51
GTF3C1-205ENST00000564747 FCER1GP30273 86 aa11.9□□□□□ -0.51
GTF3C1-205ENST00000564747 RAB9AP51151 201 aa11.9□□□□□ -0.51
GTF3C1-205ENST00000564747 SPCS1Q9Y6A9 102 aa11.9□□□□□ -0.51
GTF3C1-205ENST00000564747 A0A1W2PPM0 123 aa11.89□□□□□ -0.51
GTF3C1-205ENST00000564747 RBAKDNA6NC62 111 aa11.89□□□□□ -0.51
GTF3C1-205ENST00000564747 SLC50A1Q9BRV3 221 aa11.89□□□□□ -0.51
GTF3C1-205ENST00000564747 NCOR2Q9Y618 2525 aa11.89□□□□□ -0.51
GTF3C1-205ENST00000564747 LINC01546A6NGU7 62 aa11.89□□□□□ -0.51
GTF3C1-205ENST00000564747 OR5A1Q8NGJ0 315 aa11.89□□□□□ -0.51
GTF3C1-205ENST00000564747 NPFFR1Q9GZQ6 430 aa11.89□□□□□ -0.51
GTF3C1-205ENST00000564747 NXT2Q9NPJ8 142 aaKnown RBP11.88□□□□□ -0.51
GTF3C1-205ENST00000564747 PRSS1P07477 247 aa11.88□□□□□ -0.51
GTF3C1-205ENST00000564747 ODF1Q14990 250 aa11.88□□□□□ -0.51
GTF3C1-205ENST00000564747 TM4SF20Q53R12 229 aa11.88□□□□□ -0.51
GTF3C1-205ENST00000564747 IGKV2D-26A0A0A0MRZ7 120 aa11.87□□□□□ -0.51
GTF3C1-205ENST00000564747 KLK9Q2XQG4 91 aa11.87□□□□□ -0.51
GTF3C1-205ENST00000564747 TMEM78Q5T7P6 136 aa11.87□□□□□ -0.51
GTF3C1-205ENST00000564747 NEGR1Q7Z3B1 354 aa11.87□□□□□ -0.51
GTF3C1-205ENST00000564747 TMEM158Q8WZ71 300 aa11.87□□□□□ -0.51
GTF3C1-205ENST00000564747 TTTY13Q9BZ97 58 aa11.87□□□□□ -0.51
GTF3C1-205ENST00000564747 KLK9Q9UKQ9 250 aa11.87□□□□□ -0.51
GTF3C1-205ENST00000564747 HHLA3Q9XRX5 114 aa11.87□□□□□ -0.51
GTF3C1-205ENST00000564747 HIVEP3Q5T1R4 2406 aa11.87□□□□□ -0.51
GTF3C1-205ENST00000564747 FABP2P12104 132 aa11.87□□□□□ -0.51
GTF3C1-205ENST00000564747 C8orf86Q6ZUL3 223 aa11.87□□□□□ -0.51
GTF3C1-205ENST00000564747 UBTD1Q9HAC8 227 aa11.87□□□□□ -0.51
GTF3C1-205ENST00000564747 TRAV26-2A0A0B4J265 109 aa11.86□□□□□ -0.51
GTF3C1-205ENST00000564747 CENPVL3A0A0U1RRI6 287 aa11.86□□□□□ -0.51
GTF3C1-205ENST00000564747 EEF1AKMT3Q96AZ1 226 aa11.86□□□□□ -0.51
GTF3C1-205ENST00000564747 METTL26Q96S19 204 aa11.86□□□□□ -0.51
GTF3C1-205ENST00000564747 LINC00527Q9UJ94 153 aa11.86□□□□□ -0.51
GTF3C1-205ENST00000564747 TMEM238C9JI98 176 aa11.86□□□□□ -0.51
GTF3C1-205ENST00000564747 TMEM219Q86XT9 240 aa11.86□□□□□ -0.51
GTF3C1-205ENST00000564747 ZMAT4Q9H898 229 aa11.86□□□□□ -0.51
GTF3C1-205ENST00000564747 IGLV2-18A0A075B6J9 118 aa11.85□□□□□ -0.51
GTF3C1-205ENST00000564747 IGHV7-4-1A0A0J9YVY3 117 aa11.85□□□□□ -0.51
GTF3C1-205ENST00000564747 BPESC1Q9GZL8 116 aa11.85□□□□□ -0.51
GTF3C1-205ENST00000564747 GCSHP23434 173 aa11.85□□□□□ -0.51
GTF3C1-205ENST00000564747 LMO4P61968 165 aa11.85□□□□□ -0.51
GTF3C1-205ENST00000564747 Q8N8P6 123 aa11.85□□□□□ -0.51
GTF3C1-205ENST00000564747 FOXC2Q99958 501 aa11.85□□□□□ -0.51
GTF3C1-205ENST00000564747 PIEZO1Q92508 2521 aa11.85□□□□□ -0.51
GTF3C1-205ENST00000564747 SMIM13P0DJ93 91 aa11.84□□□□□ -0.51
GTF3C1-205ENST00000564747 SAMD5Q5TGI4 173 aa11.84□□□□□ -0.51
GTF3C1-205ENST00000564747 UFC1Q9Y3C8 167 aa11.84□□□□□ -0.51
GTF3C1-205ENST00000564747 TRBV7-1A0A0A6YYK4 115 aa11.84□□□□□ -0.51
GTF3C1-205ENST00000564747 C5orf56Q8N8D9 126 aa11.84□□□□□ -0.51
GTF3C1-205ENST00000564747 NPFFO15130 113 aa11.83□□□□□ -0.52
GTF3C1-205ENST00000564747 IGKCP01834 107 aa11.83□□□□□ -0.52
GTF3C1-205ENST00000564747 IGF1P05019 195 aa11.83□□□□□ -0.52
GTF3C1-205ENST00000564747 SMIM17P0DL12 118 aa11.83□□□□□ -0.52
GTF3C1-205ENST00000564747 EFNA4P52798 201 aa11.83□□□□□ -0.52
GTF3C1-205ENST00000564747 C9orf47Q6ZRZ4 202 aa11.83□□□□□ -0.52
GTF3C1-205ENST00000564747 NRACQ8N912 160 aa11.83□□□□□ -0.52
GTF3C1-205ENST00000564747 PIFOQ8TCI5 191 aa11.83□□□□□ -0.52
GTF3C1-205ENST00000564747 U3KQE9 123 aa11.83□□□□□ -0.52
GTF3C1-205ENST00000564747 COL12A1Q99715 3063 aa11.83□□□□□ -0.52
GTF3C1-205ENST00000564747 IGHV3OR16-10A0A075B7F0 116 aa11.83□□□□□ -0.52
GTF3C1-205ENST00000564747 FXYD2P54710 66 aa11.83□□□□□ -0.52
GTF3C1-205ENST00000564747 ATP5G2Q06055 141 aa11.83□□□□□ -0.52
GTF3C1-205ENST00000564747 PSMG4Q5JS54 123 aa11.83□□□□□ -0.52
GTF3C1-205ENST00000564747 GTSCR1Q86UQ5 136 aa11.83□□□□□ -0.52
GTF3C1-205ENST00000564747 J3KRW8 73 aa11.82□□□□□ -0.52
GTF3C1-205ENST00000564747 PRR9Q5T870 116 aa11.82□□□□□ -0.52
GTF3C1-205ENST00000564747 SPANXN1Q5VSR9 72 aa11.82□□□□□ -0.52
GTF3C1-205ENST00000564747 TMEM8BA6NDV4 472 aa11.82□□□□□ -0.52
GTF3C1-205ENST00000564747 C16orf92Q96LL3 132 aa11.82□□□□□ -0.52
GTF3C1-205ENST00000564747 CHAC1Q9BUX1 264 aa11.82□□□□□ -0.52
GTF3C1-205ENST00000564747 MRPL53Q96EL3 112 aaKnown RBP11.81□□□□□ -0.52
GTF3C1-205ENST00000564747 C20orf173Q96LM9 149 aa11.81□□□□□ -0.52
GTF3C1-205ENST00000564747 HIGD1BQ9P298 99 aa11.81□□□□□ -0.52
GTF3C1-205ENST00000564747 MAP1AP78559 2803 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms