RNA–Protein interactions for RNA: ENST00000564353.5

CLK3-215, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-215ENST00000564353 TRAV26-2A0A0B4J265 109 aa10.42□□□□□ -0.74
CLK3-215ENST00000564353 TAX1BP3O14907 124 aa10.42□□□□□ -0.74
CLK3-215ENST00000564353 LY6EQ16553 131 aa10.42□□□□□ -0.74
CLK3-215ENST00000564353 ORMDL3Q8N138 153 aa10.42□□□□□ -0.74
CLK3-215ENST00000564353 AJUBAQ96IF1 538 aa10.42□□□□□ -0.74
CLK3-215ENST00000564353 PDE6HQ13956 83 aa10.41□□□□□ -0.74
CLK3-215ENST00000564353 DEFB104AQ8WTQ1 72 aa10.41□□□□□ -0.74
CLK3-215ENST00000564353 SCRT2Q9NQ03 307 aa10.41□□□□□ -0.74
CLK3-215ENST00000564353 IGF1P05019 195 aa10.41□□□□□ -0.74
CLK3-215ENST00000564353 ST20Q9HBF5 79 aa10.41□□□□□ -0.74
CLK3-215ENST00000564353 TM4SF20Q53R12 229 aa10.4□□□□□ -0.74
CLK3-215ENST00000564353 PET117Q6UWS5 81 aa10.4□□□□□ -0.74
CLK3-215ENST00000564353 TTTY13Q9BZ97 58 aa10.4□□□□□ -0.74
CLK3-215ENST00000564353 C11orf21Q9P2W6 132 aa10.4□□□□□ -0.74
CLK3-215ENST00000564353 TRBV12-3P01733 135 aa10.4□□□□□ -0.74
CLK3-215ENST00000564353 IGHV3-11P01762 117 aa10.4□□□□□ -0.74
CLK3-215ENST00000564353 BVES-AS1Q5T3Y7 98 aa10.4□□□□□ -0.74
CLK3-215ENST00000564353 ZNF502Q8TBZ5 544 aa10.4□□□□□ -0.74
CLK3-215ENST00000564353 TRBV6-1A0A0K0K1D8 114 aa10.39□□□□□ -0.75
CLK3-215ENST00000564353 BUB3O43684 328 aa10.39□□□□□ -0.75
CLK3-215ENST00000564353 TRGV3P03979 118 aa10.39□□□□□ -0.75
CLK3-215ENST00000564353 LINC01545Q5VT33 79 aa10.39□□□□□ -0.75
CLK3-215ENST00000564353 DKK2Q9UBU2 259 aa10.39□□□□□ -0.75
CLK3-215ENST00000564353 CLPSL1A2RUU4 121 aa10.39□□□□□ -0.75
CLK3-215ENST00000564353 NMUP48645 174 aa10.39□□□□□ -0.75
CLK3-215ENST00000564353 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.39□□□□□ -0.75
CLK3-215ENST00000564353 ZFAND3Q9H8U3 227 aa10.39□□□□□ -0.75
CLK3-215ENST00000564353 UFC1Q9Y3C8 167 aa10.39□□□□□ -0.75
CLK3-215ENST00000564353 TRAV8-6A0A0B4J262 113 aa10.39□□□□□ -0.75
CLK3-215ENST00000564353 AGPAT4-IT1Q9H0P7 198 aa10.39□□□□□ -0.75
CLK3-215ENST00000564353 SS18L2Q9UHA2 77 aa10.39□□□□□ -0.75
CLK3-215ENST00000564353 POLQO75417 2590 aa10.38□□□□□ -0.75
CLK3-215ENST00000564353 CSPG4Q6UVK1 2322 aa10.38□□□□□ -0.75
CLK3-215ENST00000564353 GNLYP22749 145 aa10.38□□□□□ -0.75
CLK3-215ENST00000564353 HERV-K104P63124 156 aa10.38□□□□□ -0.75
CLK3-215ENST00000564353 GLMPQ8WWB7 406 aa10.38□□□□□ -0.75
CLK3-215ENST00000564353 LMO4P61968 165 aa10.38□□□□□ -0.75
CLK3-215ENST00000564353 RPL11P62913 178 aaKnown RBP10.38□□□□□ -0.75
CLK3-215ENST00000564353 MINOS1Q5TGZ0 78 aa10.38□□□□□ -0.75
CLK3-215ENST00000564353 DTX2Q86UW9 622 aa10.38□□□□□ -0.75
CLK3-215ENST00000564353 MINOS1-NBL1R4GNA1 71 aa10.38□□□□□ -0.75
CLK3-215ENST00000564353 CENPVL3A0A0U1RRI6 287 aa10.37□□□□□ -0.75
CLK3-215ENST00000564353 SRD5A1P18405 259 aa10.37□□□□□ -0.75
CLK3-215ENST00000564353 UBE2E1P51965 193 aa10.37□□□□□ -0.75
CLK3-215ENST00000564353 Q6AWC8 147 aa10.37□□□□□ -0.75
CLK3-215ENST00000564353 ZNF493Q6ZR52 646 aa10.37□□□□□ -0.75
CLK3-215ENST00000564353 ZANQ9Y493 2812 aa10.37□□□□□ -0.75
CLK3-215ENST00000564353 TRAV40A0A0B4J280 105 aa10.37□□□□□ -0.75
CLK3-215ENST00000564353 IGKV3D-20A0A0C4DH25 116 aa10.37□□□□□ -0.75
CLK3-215ENST00000564353 NPFFO15130 113 aa10.37□□□□□ -0.75
CLK3-215ENST00000564353 EBI3Q14213 229 aa10.37□□□□□ -0.75
CLK3-215ENST00000564353 PCP2Q8IVA1 136 aa10.37□□□□□ -0.75
CLK3-215ENST00000564353 FAM110DQ8TAY7 271 aaPredicted RBP10.37□□□□□ -0.75
CLK3-215ENST00000564353 FABP5P3A8MUU1 101 aa10.36□□□□□ -0.75
CLK3-215ENST00000564353 UNQ9165/PRO28630Q6UXU0 137 aa10.36□□□□□ -0.75
CLK3-215ENST00000564353 RNF185Q96GF1 192 aa10.36□□□□□ -0.75
CLK3-215ENST00000564353 K7EMI3 77 aa10.36□□□□□ -0.75
CLK3-215ENST00000564353 LEPP41159 167 aa10.36□□□□□ -0.75
CLK3-215ENST00000564353 EFNA4P52798 201 aa10.36□□□□□ -0.75
CLK3-215ENST00000564353 C2orf91Q6ZV80 131 aa10.36□□□□□ -0.75
CLK3-215ENST00000564353 SIGMAR1Q99720 223 aa10.36□□□□□ -0.75
CLK3-215ENST00000564353 ABCA2Q9BZC7 2435 aa10.36□□□□□ -0.75
CLK3-215ENST00000564353 TRAV8-2A0A0B4J237 113 aa10.35□□□□□ -0.75
CLK3-215ENST00000564353 IGLC6P0CF74 106 aa10.35□□□□□ -0.75
CLK3-215ENST00000564353 C8orf86Q6ZUL3 223 aa10.35□□□□□ -0.75
CLK3-215ENST00000564353 IFI27L1Q96BM0 104 aa10.35□□□□□ -0.75
CLK3-215ENST00000564353 ACACBO00763 2458 aa10.35□□□□□ -0.75
CLK3-215ENST00000564353 IGSF10Q6WRI0 2623 aa10.35□□□□□ -0.75
CLK3-215ENST00000564353 GAGE10A6NGK3 116 aa10.35□□□□□ -0.75
CLK3-215ENST00000564353 F6UB75 175 aa10.35□□□□□ -0.75
CLK3-215ENST00000564353 HBDP02042 147 aa10.35□□□□□ -0.75
CLK3-215ENST00000564353 KIR3DS1Q14943 382 aa10.35□□□□□ -0.75
CLK3-215ENST00000564353 Q6ZS46 218 aa10.35□□□□□ -0.75
CLK3-215ENST00000564353 CACNA1AO00555 2505 aa10.35□□□□□ -0.75
CLK3-215ENST00000564353 SCGB2A1O75556 95 aa10.34□□□□□ -0.75
CLK3-215ENST00000564353 PRR9Q5T870 116 aa10.34□□□□□ -0.75
CLK3-215ENST00000564353 RAB37Q96AX2 223 aa10.34□□□□□ -0.75
CLK3-215ENST00000564353 PGPEP1Q9NXJ5 209 aa10.34□□□□□ -0.75
CLK3-215ENST00000564353 ZFYVE26Q68DK2 2539 aa10.34□□□□□ -0.75
CLK3-215ENST00000564353 A0A1B0GW15 77 aa10.34□□□□□ -0.75
CLK3-215ENST00000564353 SMAD7O15105 426 aaKnown RBP10.34□□□□□ -0.75
CLK3-215ENST00000564353 IGHV4-39P01824 125 aa10.34□□□□□ -0.75
CLK3-215ENST00000564353 EDN2P20800 178 aa10.34□□□□□ -0.75
CLK3-215ENST00000564353 C16orf92Q96LL3 132 aa10.34□□□□□ -0.75
CLK3-215ENST00000564353 HIF1ANQ9NWT6 349 aa10.34□□□□□ -0.75
CLK3-215ENST00000564353 H3BVH4 76 aa10.34□□□□□ -0.75
CLK3-215ENST00000564353 TNFRSF6BO95407 300 aa10.34□□□□□ -0.75
CLK3-215ENST00000564353 BRI3O95415 125 aa10.34□□□□□ -0.75
CLK3-215ENST00000564353 IGHV4-38-2P0DP08 117 aa10.34□□□□□ -0.75
CLK3-215ENST00000564353 COX8AP10176 69 aa10.34□□□□□ -0.75
CLK3-215ENST00000564353 TMEM78Q5T7P6 136 aa10.34□□□□□ -0.75
CLK3-215ENST00000564353 C5orf56Q8N8D9 126 aa10.34□□□□□ -0.75
CLK3-215ENST00000564353 C20orf173Q96LM9 149 aa10.34□□□□□ -0.75
CLK3-215ENST00000564353 METTL26Q96S19 204 aa10.34□□□□□ -0.75
CLK3-215ENST00000564353 KLK15Q9H2R5 256 aa10.34□□□□□ -0.75
CLK3-215ENST00000564353 DOPEY2Q9Y3R5 2298 aa10.34□□□□□ -0.75
CLK3-215ENST00000564353 PRSS1P07477 247 aa10.33□□□□□ -0.76
CLK3-215ENST00000564353 NRGNQ92686 78 aa10.33□□□□□ -0.76
CLK3-215ENST00000564353 EEF1AKMT3Q96AZ1 226 aa10.33□□□□□ -0.76
CLK3-215ENST00000564353 U3KQK5 164 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms