RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 ARPC5LQ9BPX5 153 aa14.31□□□□□ -0.12
CHD9-208ENST00000563410 NMES1Q9C002 83 aa14.31□□□□□ -0.12
CHD9-208ENST00000563410 C8orf49Q96NF6 230 aa14.3□□□□□ -0.12
CHD9-208ENST00000563410 HHLA3Q9XRX5 114 aa14.3□□□□□ -0.12
CHD9-208ENST00000563410 TNFRSF18Q9Y5U5 241 aa14.3□□□□□ -0.12
CHD9-208ENST00000563410 ZNF415Q09FC8 603 aa14.29□□□□□ -0.12
CHD9-208ENST00000563410 SLAQ13239 276 aa14.29□□□□□ -0.12
CHD9-208ENST00000563410 LRRC37A5PQ49AS3 106 aa14.29□□□□□ -0.12
CHD9-208ENST00000563410 LYPD5Q6UWN5 251 aa14.29□□□□□ -0.12
CHD9-208ENST00000563410 RBAKDNA6NC62 111 aa14.28□□□□□ -0.12
CHD9-208ENST00000563410 PRAF2O60831 178 aa14.28□□□□□ -0.12
CHD9-208ENST00000563410 ZNF266Q14584 549 aa14.28□□□□□ -0.12
CHD9-208ENST00000563410 MUC21Q5SSG8 566 aa14.28□□□□□ -0.12
CHD9-208ENST00000563410 LINC00299Q6ZSB3 139 aa14.28□□□□□ -0.12
CHD9-208ENST00000563410 KCNIP2Q9NS61 270 aa14.28□□□□□ -0.12
CHD9-208ENST00000563410 MDFICQ9P1T7 246 aa14.28□□□□□ -0.12
CHD9-208ENST00000563410 OR7C2O60412 319 aa14.27□□□□□ -0.13
CHD9-208ENST00000563410 RANP62826 216 aaKnown RBP14.27□□□□□ -0.13
CHD9-208ENST00000563410 MRPL23Q16540 153 aaKnown RBP14.27□□□□□ -0.13
CHD9-208ENST00000563410 LYPD1Q8N2G4 141 aa14.27□□□□□ -0.13
CHD9-208ENST00000563410 C17orf112F2Z3M2 114 aa14.26□□□□□ -0.13
CHD9-208ENST00000563410 SFTA3P0C7M3 94 aa14.26□□□□□ -0.13
CHD9-208ENST00000563410 FUSP35637 526 aaKnown RBP eCLIP14.26□□□□□ -0.13
CHD9-208ENST00000563410 Q6AWC8 147 aa14.26□□□□□ -0.13
CHD9-208ENST00000563410 NEGR1Q7Z3B1 354 aa14.26□□□□□ -0.13
CHD9-208ENST00000563410 ZNF479Q96JC4 524 aa14.26□□□□□ -0.13
CHD9-208ENST00000563410 CSN1S1P47710 185 aa14.25□□□□□ -0.13
CHD9-208ENST00000563410 IQCF2Q8IXL9 164 aa14.25□□□□□ -0.13
CHD9-208ENST00000563410 ENKURQ8TC29 256 aa14.25□□□□□ -0.13
CHD9-208ENST00000563410 ATP5SQ99766 215 aa14.25□□□□□ -0.13
CHD9-208ENST00000563410 PGPEP1Q9NXJ5 209 aa14.25□□□□□ -0.13
CHD9-208ENST00000563410 DIRC3C9JPN6 131 aa14.24□□□□□ -0.13
CHD9-208ENST00000563410 K7EQD1 137 aa14.24□□□□□ -0.13
CHD9-208ENST00000563410 H2BFSP57053 126 aa14.24□□□□□ -0.13
CHD9-208ENST00000563410 UBE2L3P68036 154 aaKnown RBP14.24□□□□□ -0.13
CHD9-208ENST00000563410 CYCSP99999 105 aaKnown RBP14.24□□□□□ -0.13
CHD9-208ENST00000563410 OR10G4Q8NGN3 311 aa14.24□□□□□ -0.13
CHD9-208ENST00000563410 S100ZQ8WXG8 99 aa14.24□□□□□ -0.13
CHD9-208ENST00000563410 RASL10AQ92737 203 aa14.24□□□□□ -0.13
CHD9-208ENST00000563410 TRGV4A0A0C4DH28 118 aa14.23□□□□□ -0.13
CHD9-208ENST00000563410 ERVFC1-1P60608 527 aa14.23□□□□□ -0.13
CHD9-208ENST00000563410 IFITM3Q01628 133 aa14.23□□□□□ -0.13
CHD9-208ENST00000563410 TMEM183BQ1AE95 376 aa14.23□□□□□ -0.13
CHD9-208ENST00000563410 FFAR4Q5NUL3 377 aa14.23□□□□□ -0.13
CHD9-208ENST00000563410 TMEM183AQ8IXX5 376 aa14.23□□□□□ -0.13
CHD9-208ENST00000563410 PPP1R1CQ8WVI7 109 aa14.23□□□□□ -0.13
CHD9-208ENST00000563410 LENEPQ9Y5L5 61 aa14.23□□□□□ -0.13
CHD9-208ENST00000563410 FAT1Q14517 4588 aa14.23□□□□□ -0.13
CHD9-208ENST00000563410 WFDC10BQ8IUB3 73 aa14.22□□□□□ -0.13
CHD9-208ENST00000563410 SPXQ9BT56 116 aa14.22□□□□□ -0.13
CHD9-208ENST00000563410 HSPB11Q9Y547 144 aa14.22□□□□□ -0.13
CHD9-208ENST00000563410 LY96Q9Y6Y9 160 aa14.22□□□□□ -0.13
CHD9-208ENST00000563410 EIF3GO75821 320 aaKnown RBP eCLIP14.21□□□□□ -0.13
CHD9-208ENST00000563410 UPK1BO75841 260 aa14.21□□□□□ -0.13
CHD9-208ENST00000563410 DNAH10OSP0CZ25 163 aa14.21□□□□□ -0.13
CHD9-208ENST00000563410 SRIP30626 198 aa14.21□□□□□ -0.13
CHD9-208ENST00000563410 KHDC3LQ587J8 217 aa14.21□□□□□ -0.13
CHD9-208ENST00000563410 NFE4Q86UQ8 179 aa14.21□□□□□ -0.13
CHD9-208ENST00000563410 TMED6Q8WW62 240 aa14.21□□□□□ -0.13
CHD9-208ENST00000563410 TRGV11A0A075B6L2 103 aa14.2□□□□□ -0.14
CHD9-208ENST00000563410 INMT-MINDY4F8WBC2 141 aa14.2□□□□□ -0.14
CHD9-208ENST00000563410 EREGO14944 169 aa14.2□□□□□ -0.14
CHD9-208ENST00000563410 GYPEP15421 78 aa14.2□□□□□ -0.14
CHD9-208ENST00000563410 TDRG1Q3Y452 100 aa14.2□□□□□ -0.14
CHD9-208ENST00000563410 CDPF1Q6NVV7 123 aa14.2□□□□□ -0.14
CHD9-208ENST00000563410 FAM159AQ6UWV7 190 aa14.2□□□□□ -0.14
CHD9-208ENST00000563410 VPS13BQ7Z7G8 4022 aa14.19□□□□□ -0.14
CHD9-208ENST00000563410 A0A087WTM6 91 aa14.19□□□□□ -0.14
CHD9-208ENST00000563410 MPC2O95563 127 aa14.19□□□□□ -0.14
CHD9-208ENST00000563410 XGP55808 180 aa14.19□□□□□ -0.14
CHD9-208ENST00000563410 HYLS1Q96M11 299 aa14.19□□□□□ -0.14
CHD9-208ENST00000563410 TRAV9-2A0A087WT02 112 aa14.18□□□□□ -0.14
CHD9-208ENST00000563410 ORM1P02763 201 aa14.18□□□□□ -0.14
CHD9-208ENST00000563410 TAS2R45P59539 299 aa14.18□□□□□ -0.14
CHD9-208ENST00000563410 SMIM3Q9BZL3 60 aa14.18□□□□□ -0.14
CHD9-208ENST00000563410 OTORQ9NRC9 128 aa14.18□□□□□ -0.14
CHD9-208ENST00000563410 MSRB1Q9NZV6 116 aa14.18□□□□□ -0.14
CHD9-208ENST00000563410 HERC1Q15751 4861 aa14.18□□□□□ -0.14
CHD9-208ENST00000563410 TRAV4A0A0B4J268 109 aa14.17□□□□□ -0.14
CHD9-208ENST00000563410 PGPA6NDG6 321 aa14.17□□□□□ -0.14
CHD9-208ENST00000563410 EPM2AB3EWF7 344 aa14.17□□□□□ -0.14
CHD9-208ENST00000563410 GNRH2O43555 120 aa14.17□□□□□ -0.14
CHD9-208ENST00000563410 PCNPQ8WW12 178 aaKnown RBP14.17□□□□□ -0.14
CHD9-208ENST00000563410 TVP23CQ96ET8 276 aa14.17□□□□□ -0.14
CHD9-208ENST00000563410 MARVELD1Q9BSK0 173 aa14.17□□□□□ -0.14
CHD9-208ENST00000563410 NAGKQ9UJ70 344 aa14.17□□□□□ -0.14
CHD9-208ENST00000563410 IGHV3-16A0A0C4DH30 117 aa14.16□□□□□ -0.14
CHD9-208ENST00000563410 K7EP13 123 aa14.16□□□□□ -0.14
CHD9-208ENST00000563410 IFNA5P01569 189 aa14.16□□□□□ -0.14
CHD9-208ENST00000563410 RPL12P30050 165 aaKnown RBP14.16□□□□□ -0.14
CHD9-208ENST00000563410 KRTAP10-1P60331 282 aa14.16□□□□□ -0.14
CHD9-208ENST00000563410 SCGB1C1Q8TD33 95 aa14.16□□□□□ -0.14
CHD9-208ENST00000563410 WFDC1Q9HC57 220 aa14.16□□□□□ -0.14
CHD9-208ENST00000563410 PTTG2Q9NZH5 202 aa14.16□□□□□ -0.14
CHD9-208ENST00000563410 MBD2Q9UBB5 411 aa14.16□□□□□ -0.14
CHD9-208ENST00000563410 RPH3ALQ9UNE2 315 aa14.16□□□□□ -0.14
CHD9-208ENST00000563410 LOC100131303A0A0U1RQF7 123 aa14.15□□□□□ -0.14
CHD9-208ENST00000563410 M0R2P5 195 aa14.15□□□□□ -0.14
CHD9-208ENST00000563410 GOLT1AQ6ZVE7 132 aa14.15□□□□□ -0.14
CHD9-208ENST00000563410 OR4C5Q8NGB2 326 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms