RNA–Protein interactions for RNA: ENST00000563346.1

TSC2-219, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-219ENST00000563346 Q6ZQT7 251 aa11.9□□□□□ -0.5
TSC2-219ENST00000563346 PHYHIPLQ96FC7 376 aa11.9□□□□□ -0.5
TSC2-219ENST00000563346 PRO0255Q9UI72 69 aa11.9□□□□□ -0.5
TSC2-219ENST00000563346 TRBV7-9A0A0J9YWB2 115 aa11.89□□□□□ -0.51
TSC2-219ENST00000563346 H0YIZ8 118 aa11.89□□□□□ -0.51
TSC2-219ENST00000563346 LINC00315P59091 139 aa11.89□□□□□ -0.51
TSC2-219ENST00000563346 LRP1BQ9NZR2 4599 aa11.89□□□□□ -0.51
TSC2-219ENST00000563346 PRAF2O60831 178 aa11.88□□□□□ -0.51
TSC2-219ENST00000563346 NXPH4O95158 308 aa11.88□□□□□ -0.51
TSC2-219ENST00000563346 KRTAP10-2P60368 255 aa11.88□□□□□ -0.51
TSC2-219ENST00000563346 UBE2L3P68036 154 aaKnown RBP11.88□□□□□ -0.51
TSC2-219ENST00000563346 MUC21Q5SSG8 566 aa11.88□□□□□ -0.51
TSC2-219ENST00000563346 C8orf49Q96NF6 230 aa11.88□□□□□ -0.51
TSC2-219ENST00000563346 ATP5SQ99766 215 aa11.88□□□□□ -0.51
TSC2-219ENST00000563346 HHLA3Q9XRX5 114 aa11.88□□□□□ -0.51
TSC2-219ENST00000563346 HERC1Q15751 4861 aa11.88□□□□□ -0.51
TSC2-219ENST00000563346 RBAKDNA6NC62 111 aa11.87□□□□□ -0.51
TSC2-219ENST00000563346 INMT-MINDY4F8WBC2 141 aa11.87□□□□□ -0.51
TSC2-219ENST00000563346 UPK1BO75841 260 aa11.87□□□□□ -0.51
TSC2-219ENST00000563346 CRYBA4P53673 196 aa11.87□□□□□ -0.51
TSC2-219ENST00000563346 MRPL23Q16540 153 aaKnown RBP11.87□□□□□ -0.51
TSC2-219ENST00000563346 FFAR4Q5NUL3 377 aa11.87□□□□□ -0.51
TSC2-219ENST00000563346 LYPD1Q8N2G4 141 aa11.87□□□□□ -0.51
TSC2-219ENST00000563346 TRGV4A0A0C4DH28 118 aa11.86□□□□□ -0.51
TSC2-219ENST00000563346 TAS2R45P59539 299 aa11.86□□□□□ -0.51
TSC2-219ENST00000563346 FHL2Q14192 279 aa11.86□□□□□ -0.51
TSC2-219ENST00000563346 ZNF266Q14584 549 aa11.86□□□□□ -0.51
TSC2-219ENST00000563346 KHDC3LQ587J8 217 aa11.86□□□□□ -0.51
TSC2-219ENST00000563346 SCGB1C1Q8TD33 95 aa11.86□□□□□ -0.51
TSC2-219ENST00000563346 PPP1R1CQ8WVI7 109 aa11.86□□□□□ -0.51
TSC2-219ENST00000563346 KRTAP3-3Q9BYR6 98 aa11.86□□□□□ -0.51
TSC2-219ENST00000563346 KRTAP3-2Q9BYR7 98 aa11.86□□□□□ -0.51
TSC2-219ENST00000563346 EREGO14944 169 aa11.85□□□□□ -0.51
TSC2-219ENST00000563346 IFNA5P01569 189 aa11.85□□□□□ -0.51
TSC2-219ENST00000563346 PET100P0DJ07 73 aa11.85□□□□□ -0.51
TSC2-219ENST00000563346 FAM159AQ6UWV7 190 aa11.85□□□□□ -0.51
TSC2-219ENST00000563346 NEGR1Q7Z3B1 354 aa11.85□□□□□ -0.51
TSC2-219ENST00000563346 MDFICQ9P1T7 246 aa11.85□□□□□ -0.51
TSC2-219ENST00000563346 HSPB11Q9Y547 144 aa11.85□□□□□ -0.51
TSC2-219ENST00000563346 DIRC3C9JPN6 131 aa11.84□□□□□ -0.51
TSC2-219ENST00000563346 SSNA1O43805 119 aa11.84□□□□□ -0.51
TSC2-219ENST00000563346 H2BFSP57053 126 aa11.84□□□□□ -0.51
TSC2-219ENST00000563346 LYPD5Q6UWN5 251 aa11.84□□□□□ -0.51
TSC2-219ENST00000563346 Q8N1X5 172 aa11.84□□□□□ -0.51
TSC2-219ENST00000563346 PCNPQ8WW12 178 aaKnown RBP11.84□□□□□ -0.51
TSC2-219ENST00000563346 HYLS1Q96M11 299 aa11.84□□□□□ -0.51
TSC2-219ENST00000563346 SMIM3Q9BZL3 60 aa11.84□□□□□ -0.51
TSC2-219ENST00000563346 SCRT2Q9NQ03 307 aa11.84□□□□□ -0.51
TSC2-219ENST00000563346 TRGV11A0A075B6L2 103 aa11.83□□□□□ -0.52
TSC2-219ENST00000563346 TRAV9-2A0A087WT02 112 aa11.83□□□□□ -0.52
TSC2-219ENST00000563346 SRIP30626 198 aa11.83□□□□□ -0.52
TSC2-219ENST00000563346 TMEM183BQ1AE95 376 aa11.83□□□□□ -0.52
TSC2-219ENST00000563346 Q6AWC8 147 aa11.83□□□□□ -0.52
TSC2-219ENST00000563346 Q6ZRN7 208 aaPredicted RBP11.83□□□□□ -0.52
TSC2-219ENST00000563346 TMEM183AQ8IXX5 376 aa11.83□□□□□ -0.52
TSC2-219ENST00000563346 CMTM2Q8TAZ6 248 aa11.83□□□□□ -0.52
TSC2-219ENST00000563346 SPXQ9BT56 116 aa11.83□□□□□ -0.52
TSC2-219ENST00000563346 NAGKQ9UJ70 344 aa11.83□□□□□ -0.52
TSC2-219ENST00000563346 RPH3ALQ9UNE2 315 aa11.83□□□□□ -0.52
TSC2-219ENST00000563346 LENEPQ9Y5L5 61 aa11.83□□□□□ -0.52
TSC2-219ENST00000563346 APOBP04114 4563 aaKnown RBP11.82□□□□□ -0.52
TSC2-219ENST00000563346 MPC2O95563 127 aa11.82□□□□□ -0.52
TSC2-219ENST00000563346 SFTA3P0C7M3 94 aa11.82□□□□□ -0.52
TSC2-219ENST00000563346 ERVFC1-1P60608 527 aa11.82□□□□□ -0.52
TSC2-219ENST00000563346 FAM74A1Q5RGS3 127 aa11.82□□□□□ -0.52
TSC2-219ENST00000563346 NFE4Q86UQ8 179 aa11.82□□□□□ -0.52
TSC2-219ENST00000563346 ZNF479Q96JC4 524 aa11.82□□□□□ -0.52
TSC2-219ENST00000563346 PTTG2Q9NZH5 202 aa11.82□□□□□ -0.52
TSC2-219ENST00000563346 PGPA6NDG6 321 aa11.81□□□□□ -0.52
TSC2-219ENST00000563346 K7EQD1 137 aa11.81□□□□□ -0.52
TSC2-219ENST00000563346 RPL12P30050 165 aaKnown RBP11.81□□□□□ -0.52
TSC2-219ENST00000563346 IFITM3Q01628 133 aa11.81□□□□□ -0.52
TSC2-219ENST00000563346 OR10G4Q8NGN3 311 aa11.81□□□□□ -0.52
TSC2-219ENST00000563346 RASL10AQ92737 203 aa11.81□□□□□ -0.52
TSC2-219ENST00000563346 OTORQ9NRC9 128 aa11.81□□□□□ -0.52
TSC2-219ENST00000563346 MBD2Q9UBB5 411 aa11.81□□□□□ -0.52
TSC2-219ENST00000563346 LY96Q9Y6Y9 160 aa11.81□□□□□ -0.52
TSC2-219ENST00000563346 A0A1W2PPV4 95 aa11.8□□□□□ -0.52
TSC2-219ENST00000563346 EIF3GO75821 320 aaKnown RBP eCLIP11.8□□□□□ -0.52
TSC2-219ENST00000563346 ORM1P02763 201 aa11.8□□□□□ -0.52
TSC2-219ENST00000563346 GYPEP15421 78 aa11.8□□□□□ -0.52
TSC2-219ENST00000563346 IQCF2Q8IXL9 164 aa11.8□□□□□ -0.52
TSC2-219ENST00000563346 TMED6Q8WW62 240 aa11.8□□□□□ -0.52
TSC2-219ENST00000563346 MARVELD1Q9BSK0 173 aa11.8□□□□□ -0.52
TSC2-219ENST00000563346 PGPEP1Q9NXJ5 209 aa11.8□□□□□ -0.52
TSC2-219ENST00000563346 TNFRSF18Q9Y5U5 241 aa11.8□□□□□ -0.52
TSC2-219ENST00000563346 DEFA1P59665 94 aa11.79□□□□□ -0.52
TSC2-219ENST00000563346 DEFA3P59666 94 aa11.79□□□□□ -0.52
TSC2-219ENST00000563346 ACOT6Q3I5F7 207 aaPredicted RBP11.79□□□□□ -0.52
TSC2-219ENST00000563346 DMRTA1Q5VZB9 504 aa11.79□□□□□ -0.52
TSC2-219ENST00000563346 TXNDC17Q9BRA2 123 aa11.79□□□□□ -0.52
TSC2-219ENST00000563346 C9JCJ5 164 aa11.78□□□□□ -0.52
TSC2-219ENST00000563346 EVI2AP22794 236 aa11.78□□□□□ -0.52
TSC2-219ENST00000563346 PQLC2Q6ZP29 291 aa11.78□□□□□ -0.52
TSC2-219ENST00000563346 OR4C5Q8NGB2 326 aa11.78□□□□□ -0.52
TSC2-219ENST00000563346 TRAV4A0A0B4J268 109 aa11.77□□□□□ -0.53
TSC2-219ENST00000563346 TRAV21A0A0B4J279 112 aa11.77□□□□□ -0.53
TSC2-219ENST00000563346 M0R2P5 195 aa11.77□□□□□ -0.53
TSC2-219ENST00000563346 GNRH2O43555 120 aa11.77□□□□□ -0.53
TSC2-219ENST00000563346 TDRG1Q3Y452 100 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms