RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 LOC102723971A0A1B0GUV8 181 aa7.01□□□□□ -1.29
CLK3-208ENST00000562626 C11orf94C9JXX5 98 aa7.01□□□□□ -1.29
CLK3-208ENST00000562626 HBE1P02100 147 aa7.01□□□□□ -1.29
CLK3-208ENST00000562626 MIFP14174 115 aa7.01□□□□□ -1.29
CLK3-208ENST00000562626 HTN1P15515 57 aa7.01□□□□□ -1.29
CLK3-208ENST00000562626 TSPOP30536 169 aa7.01□□□□□ -1.29
CLK3-208ENST00000562626 IFITM2Q01629 132 aa7.01□□□□□ -1.29
CLK3-208ENST00000562626 ZNF767PQ75MW2 155 aa7.01□□□□□ -1.29
CLK3-208ENST00000562626 WWC2-AS2Q96NR7 200 aa7.01□□□□□ -1.29
CLK3-208ENST00000562626 LINC01587Q99440 93 aa7.01□□□□□ -1.29
CLK3-208ENST00000562626 TMEM208Q9BTX3 173 aa7.01□□□□□ -1.29
CLK3-208ENST00000562626 C11orf68Q9H3H3 251 aaKnown RBP7.01□□□□□ -1.29
CLK3-208ENST00000562626 C11orf21Q9P2W6 132 aa7.01□□□□□ -1.29
CLK3-208ENST00000562626 TENM2Q9NT68 2774 aa7.01□□□□□ -1.29
CLK3-208ENST00000562626 TRBV7-9A0A0J9YWB2 115 aa7□□□□□ -1.29
CLK3-208ENST00000562626 NMBP08949 121 aa7□□□□□ -1.29
CLK3-208ENST00000562626 BCL2P10415 239 aa7□□□□□ -1.29
CLK3-208ENST00000562626 EMP1P54849 157 aa7□□□□□ -1.29
CLK3-208ENST00000562626 NANOS2P60321 138 aaKnown RBP7□□□□□ -1.29
CLK3-208ENST00000562626 BLOC1S1P78537 153 aa7□□□□□ -1.29
CLK3-208ENST00000562626 MUC21Q5SSG8 566 aa7□□□□□ -1.29
CLK3-208ENST00000562626 Q6AWC8 147 aa7□□□□□ -1.29
CLK3-208ENST00000562626 NHLRC2Q8NBF2 726 aa7□□□□□ -1.29
CLK3-208ENST00000562626 IL17DQ8TAD2 202 aa7□□□□□ -1.29
CLK3-208ENST00000562626 HIST1H2BAQ96A08 127 aa7□□□□□ -1.29
CLK3-208ENST00000562626 NKX6-2Q9C056 277 aaPredicted RBP7□□□□□ -1.29
CLK3-208ENST00000562626 TREM1Q9NP99 234 aa7□□□□□ -1.29
CLK3-208ENST00000562626 MANBALQ9NQG1 85 aa7□□□□□ -1.29
CLK3-208ENST00000562626 KLF12Q9Y4X4 402 aa7□□□□□ -1.29
CLK3-208ENST00000562626 LENEPQ9Y5L5 61 aa7□□□□□ -1.29
CLK3-208ENST00000562626 SERTM2A0A1B0GWG4 89 aa6.99□□□□□ -1.29
CLK3-208ENST00000562626 H7BYZ3 331 aa6.99□□□□□ -1.29
CLK3-208ENST00000562626 AKR1C3P42330 323 aa6.99□□□□□ -1.29
CLK3-208ENST00000562626 CRIP1P50238 77 aa6.99□□□□□ -1.29
CLK3-208ENST00000562626 MEF2BQ02080 365 aaPredicted RBP6.99□□□□□ -1.29
CLK3-208ENST00000562626 PMS2P11Q13670 270 aa6.99□□□□□ -1.29
CLK3-208ENST00000562626 TMEM183BQ1AE95 376 aa6.99□□□□□ -1.29
CLK3-208ENST00000562626 RRN3P1Q2M238 152 aa6.99□□□□□ -1.29
CLK3-208ENST00000562626 ZFAND6Q6FIF0 208 aa6.99□□□□□ -1.29
CLK3-208ENST00000562626 TMEM256Q8N2U0 113 aa6.99□□□□□ -1.29
CLK3-208ENST00000562626 C11orf72Q8NBR9 251 aa6.99□□□□□ -1.29
CLK3-208ENST00000562626 RNASE8Q8TDE3 154 aaKnown RBP6.99□□□□□ -1.29
CLK3-208ENST00000562626 C11orf52Q96A22 123 aa6.99□□□□□ -1.29
CLK3-208ENST00000562626 ZC2HC1AQ96GY0 325 aa6.99□□□□□ -1.29
CLK3-208ENST00000562626 C20orf144Q9BQM9 153 aa6.99□□□□□ -1.29
CLK3-208ENST00000562626 TRBV20OR9-2A0A075B6H5 130 aa6.98□□□□□ -1.29
CLK3-208ENST00000562626 RAB19A4D1S5 217 aa6.98□□□□□ -1.29
CLK3-208ENST00000562626 SMIM9A6NGZ8 99 aa6.98□□□□□ -1.29
CLK3-208ENST00000562626 GCGP01275 180 aa6.98□□□□□ -1.29
CLK3-208ENST00000562626 LTAP01374 205 aa6.98□□□□□ -1.29
CLK3-208ENST00000562626 PPT1P50897 306 aa6.98□□□□□ -1.29
CLK3-208ENST00000562626 TAS2R60P59551 318 aa6.98□□□□□ -1.29
CLK3-208ENST00000562626 C12orf74Q32Q52 190 aa6.98□□□□□ -1.29
CLK3-208ENST00000562626 FAM222AQ5U5X8 452 aa6.98□□□□□ -1.29
CLK3-208ENST00000562626 NIPSNAP3BQ9BS92 247 aa6.98□□□□□ -1.29
CLK3-208ENST00000562626 DKK2Q9UBU2 259 aa6.98□□□□□ -1.29
CLK3-208ENST00000562626 PCLOQ9Y6V0 5065 aa6.98□□□□□ -1.29
CLK3-208ENST00000562626 IGHV1OR15-1A0A075B7D0 117 aa6.97□□□□□ -1.29
CLK3-208ENST00000562626 TRBV6-1A0A0K0K1D8 114 aa6.97□□□□□ -1.29
CLK3-208ENST00000562626 RBFOX3A6NFN3 312 aa6.97□□□□□ -1.29
CLK3-208ENST00000562626 PGPEP1LA6NFU8 196 aa6.97□□□□□ -1.29
CLK3-208ENST00000562626 C9JQL5 133 aa6.97□□□□□ -1.29
CLK3-208ENST00000562626 K7EQM0 130 aa6.97□□□□□ -1.29
CLK3-208ENST00000562626 GNRH2O43555 120 aa6.97□□□□□ -1.29
CLK3-208ENST00000562626 IGLV2-8P01709 118 aa6.97□□□□□ -1.29
CLK3-208ENST00000562626 RPL35P42766 123 aaKnown RBP6.97□□□□□ -1.29
CLK3-208ENST00000562626 SRSF3P84103 164 aaKnown RBP6.97□□□□□ -1.29
CLK3-208ENST00000562626 ANXA2RQ3ZCQ2 193 aa6.97□□□□□ -1.29
CLK3-208ENST00000562626 TOR2AQ5JU69 321 aa6.97□□□□□ -1.29
CLK3-208ENST00000562626 ZNF506Q5JVG8 444 aa6.97□□□□□ -1.29
CLK3-208ENST00000562626 ZNF575Q86XF7 245 aa6.97□□□□□ -1.29
CLK3-208ENST00000562626 MUC7Q8TAX7 377 aa6.97□□□□□ -1.29
CLK3-208ENST00000562626 TMEM263Q8WUH6 116 aaKnown RBP6.97□□□□□ -1.29
CLK3-208ENST00000562626 FMC1Q96HJ9 113 aa6.97□□□□□ -1.29
CLK3-208ENST00000562626 PYGO2Q9BRQ0 406 aa6.97□□□□□ -1.29
CLK3-208ENST00000562626 LINC00467Q9BRT7 94 aa6.97□□□□□ -1.29
CLK3-208ENST00000562626 TCEAL7Q9BRU2 100 aa6.97□□□□□ -1.29
CLK3-208ENST00000562626 VAX2Q9UIW0 290 aa6.97□□□□□ -1.29
CLK3-208ENST00000562626 NAGKQ9UJ70 344 aa6.97□□□□□ -1.29
CLK3-208ENST00000562626 PLECQ15149 4684 aaKnown RBP6.96□□□□□ -1.29
CLK3-208ENST00000562626 IGKV3D-20A0A0C4DH25 116 aa6.96□□□□□ -1.3
CLK3-208ENST00000562626 RGS13O14921 159 aa6.96□□□□□ -1.3
CLK3-208ENST00000562626 IFNA1P01562 189 aa6.96□□□□□ -1.3
CLK3-208ENST00000562626 TYMSP04818 313 aa6.96□□□□□ -1.3
CLK3-208ENST00000562626 UBE2G1P62253 170 aa6.96□□□□□ -1.3
CLK3-208ENST00000562626 SMUG1Q53HV7 270 aa6.96□□□□□ -1.3
CLK3-208ENST00000562626 Q6ZTC4 211 aa6.96□□□□□ -1.3
CLK3-208ENST00000562626 COX8CQ7Z4L0 72 aa6.96□□□□□ -1.3
CLK3-208ENST00000562626 TMEM183AQ8IXX5 376 aa6.96□□□□□ -1.3
CLK3-208ENST00000562626 EIF4E3Q8N5X7 224 aaKnown RBP6.96□□□□□ -1.3
CLK3-208ENST00000562626 C11orf45Q8TAV5 145 aa6.96□□□□□ -1.3
CLK3-208ENST00000562626 C16orf74Q96GX8 76 aa6.96□□□□□ -1.3
CLK3-208ENST00000562626 NDFIP1Q9BT67 221 aa6.96□□□□□ -1.3
CLK3-208ENST00000562626 MLST8Q9BVC4 326 aa6.96□□□□□ -1.3
CLK3-208ENST00000562626 GSN-AS1Q9NRJ2 163 aa6.96□□□□□ -1.3
CLK3-208ENST00000562626 MDFICQ9P1T7 246 aa6.96□□□□□ -1.3
CLK3-208ENST00000562626 LYSTQ99698 3801 aa6.95□□□□□ -1.3
CLK3-208ENST00000562626 TRAV21A0A0B4J279 112 aa6.95□□□□□ -1.3
CLK3-208ENST00000562626 FBLL1A6NHQ2 334 aaKnown RBP6.95□□□□□ -1.3
CLK3-208ENST00000562626 CBY3A6NI87 242 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 164.6 ms