RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 LYNX1G3V0Z9 82 aa11□□□□□ -0.65
GTF3C1-203ENST00000562609 LYNX1P0DP58 116 aa11□□□□□ -0.65
GTF3C1-203ENST00000562609 TNFRSF1AP19438 455 aa11□□□□□ -0.65
GTF3C1-203ENST00000562609 TEN1Q86WV5 123 aa11□□□□□ -0.65
GTF3C1-203ENST00000562609 ARL17AQ8IVW1 177 aa11□□□□□ -0.65
GTF3C1-203ENST00000562609 THAP8Q8NA92 274 aa11□□□□□ -0.65
GTF3C1-203ENST00000562609 TRBV7-3A0A075B6L6 115 aa11□□□□□ -0.65
GTF3C1-203ENST00000562609 CRIP1P50238 77 aa11□□□□□ -0.65
GTF3C1-203ENST00000562609 RUSC1-AS1Q66K80 236 aa11□□□□□ -0.65
GTF3C1-203ENST00000562609 CITED1Q99966 193 aa11□□□□□ -0.65
GTF3C1-203ENST00000562609 DYNLRB1Q9NP97 96 aa11□□□□□ -0.65
GTF3C1-203ENST00000562609 OTORQ9NRC9 128 aa11□□□□□ -0.65
GTF3C1-203ENST00000562609 FABP5P3A8MUU1 101 aa10.99□□□□□ -0.65
GTF3C1-203ENST00000562609 ZNF688P0C7X2 276 aa10.99□□□□□ -0.65
GTF3C1-203ENST00000562609 ARL3P36405 182 aa10.99□□□□□ -0.65
GTF3C1-203ENST00000562609 DLX1P56177 255 aa10.99□□□□□ -0.65
GTF3C1-203ENST00000562609 NDUFV3P56181 108 aaKnown RBP10.99□□□□□ -0.65
GTF3C1-203ENST00000562609 WT1-ASQ06250 92 aa10.99□□□□□ -0.65
GTF3C1-203ENST00000562609 TWIST1Q15672 202 aa10.99□□□□□ -0.65
GTF3C1-203ENST00000562609 ZFP2Q6ZN57 461 aa10.99□□□□□ -0.65
GTF3C1-203ENST00000562609 ARHGAP32A7KAX9 2087 aa10.99□□□□□ -0.65
GTF3C1-203ENST00000562609 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.99□□□□□ -0.65
GTF3C1-203ENST00000562609 HLA-DRB4P13762 266 aa10.99□□□□□ -0.65
GTF3C1-203ENST00000562609 RNASE6Q93091 150 aaKnown RBP10.99□□□□□ -0.65
GTF3C1-203ENST00000562609 HLA-DRB4X5D2U9 266 aa10.99□□□□□ -0.65
GTF3C1-203ENST00000562609 MAP1AP78559 2803 aaPredicted RBP10.99□□□□□ -0.65
GTF3C1-203ENST00000562609 C10orf55Q5SWW7 151 aa10.99□□□□□ -0.65
GTF3C1-203ENST00000562609 RAX2Q96IS3 184 aa10.99□□□□□ -0.65
GTF3C1-203ENST00000562609 VCX2Q9H322 139 aa10.99□□□□□ -0.65
GTF3C1-203ENST00000562609 RHODO00212 210 aa10.98□□□□□ -0.65
GTF3C1-203ENST00000562609 VKORC1Q9BQB6 163 aa10.98□□□□□ -0.65
GTF3C1-203ENST00000562609 MRPL35Q9NZE8 188 aaKnown RBP10.98□□□□□ -0.65
GTF3C1-203ENST00000562609 ABCA1O95477 2261 aa10.98□□□□□ -0.65
GTF3C1-203ENST00000562609 CCL21O00585 134 aa10.98□□□□□ -0.65
GTF3C1-203ENST00000562609 SRD5A1P18405 259 aa10.98□□□□□ -0.65
GTF3C1-203ENST00000562609 GAGE2BQ13066 116 aa10.98□□□□□ -0.65
GTF3C1-203ENST00000562609 GAGE2EQ4V326 116 aa10.98□□□□□ -0.65
GTF3C1-203ENST00000562609 TEX36Q5VZQ5 186 aa10.98□□□□□ -0.65
GTF3C1-203ENST00000562609 AJUBAQ96IF1 538 aa10.98□□□□□ -0.65
GTF3C1-203ENST00000562609 GAGE2DQ9UEU5 116 aa10.98□□□□□ -0.65
GTF3C1-203ENST00000562609 LINC01549A6NIU2 74 aa10.97□□□□□ -0.65
GTF3C1-203ENST00000562609 TMEM178BH3BS89 294 aa10.97□□□□□ -0.65
GTF3C1-203ENST00000562609 MAP1LC3AQ9H492 121 aa10.97□□□□□ -0.65
GTF3C1-203ENST00000562609 HOXB4P17483 251 aaPredicted RBP10.97□□□□□ -0.65
GTF3C1-203ENST00000562609 PRTN3P24158 256 aa10.97□□□□□ -0.65
GTF3C1-203ENST00000562609 RPEQ96AT9 228 aa10.97□□□□□ -0.65
GTF3C1-203ENST00000562609 TMEM200BQ69YZ2 307 aa10.96□□□□□ -0.65
GTF3C1-203ENST00000562609 TMEM133Q9H2Q1 129 aa10.96□□□□□ -0.65
GTF3C1-203ENST00000562609 CTSZQ9UBR2 303 aa10.96□□□□□ -0.65
GTF3C1-203ENST00000562609 WNK2Q9Y3S1 2297 aa10.96□□□□□ -0.65
GTF3C1-203ENST00000562609 IGHV3-21A0A0B4J1V1 117 aa10.96□□□□□ -0.66
GTF3C1-203ENST00000562609 NCBP2LA6PVI3 153 aaKnown RBP10.96□□□□□ -0.66
GTF3C1-203ENST00000562609 TMEM262E9PQX1 116 aa10.96□□□□□ -0.66
GTF3C1-203ENST00000562609 H3BVH4 76 aa10.96□□□□□ -0.66
GTF3C1-203ENST00000562609 ATP5LO75964 103 aa10.96□□□□□ -0.66
GTF3C1-203ENST00000562609 LY6HO94772 140 aa10.96□□□□□ -0.66
GTF3C1-203ENST00000562609 GAS8-AS1O95177 125 aa10.96□□□□□ -0.66
GTF3C1-203ENST00000562609 SUB1P53999 127 aaKnown RBP eCLIP10.96□□□□□ -0.66
GTF3C1-203ENST00000562609 TTC32Q5I0X7 151 aa10.96□□□□□ -0.66
GTF3C1-203ENST00000562609 FBXL15Q9H469 300 aa10.96□□□□□ -0.66
GTF3C1-203ENST00000562609 A0A087WX48 190 aa10.95□□□□□ -0.66
GTF3C1-203ENST00000562609 ID1P41134 155 aa10.95□□□□□ -0.66
GTF3C1-203ENST00000562609 RPUSD1Q9UJJ7 312 aaKnown RBP10.95□□□□□ -0.66
GTF3C1-203ENST00000562609 PKD1L2Q7Z442 2459 aa10.95□□□□□ -0.66
GTF3C1-203ENST00000562609 LY6DQ14210 128 aa10.95□□□□□ -0.66
GTF3C1-203ENST00000562609 C8orf49Q96NF6 230 aa10.95□□□□□ -0.66
GTF3C1-203ENST00000562609 CGB1A6NKQ9 187 aa10.94□□□□□ -0.66
GTF3C1-203ENST00000562609 NDUFA3O95167 84 aa10.94□□□□□ -0.66
GTF3C1-203ENST00000562609 NGBQ9NPG2 151 aa10.94□□□□□ -0.66
GTF3C1-203ENST00000562609 TRAV4A0A0B4J268 109 aa10.94□□□□□ -0.66
GTF3C1-203ENST00000562609 SCGB2A1O75556 95 aa10.94□□□□□ -0.66
GTF3C1-203ENST00000562609 CD3EP07766 207 aa10.94□□□□□ -0.66
GTF3C1-203ENST00000562609 TRBV6-1A0A0K0K1D8 114 aa10.94□□□□□ -0.66
GTF3C1-203ENST00000562609 A8MWV9 139 aa10.94□□□□□ -0.66
GTF3C1-203ENST00000562609 SNCGO76070 127 aa10.94□□□□□ -0.66
GTF3C1-203ENST00000562609 IFITM1P13164 125 aa10.94□□□□□ -0.66
GTF3C1-203ENST00000562609 ANKRD29Q8N6D5 301 aa10.94□□□□□ -0.66
GTF3C1-203ENST00000562609 TMEM75Q8N9X5 138 aa10.94□□□□□ -0.66
GTF3C1-203ENST00000562609 VPS13CQ709C8 3753 aa10.93□□□□□ -0.66
GTF3C1-203ENST00000562609 MYMXA0A1B0GTQ4 84 aa10.93□□□□□ -0.66
GTF3C1-203ENST00000562609 TGFAP01135 160 aa10.93□□□□□ -0.66
GTF3C1-203ENST00000562609 HCP5Q6MZN7 132 aa10.93□□□□□ -0.66
GTF3C1-203ENST00000562609 FAM159AQ6UWV7 190 aa10.93□□□□□ -0.66
GTF3C1-203ENST00000562609 C17orf77Q96MU5 243 aa10.93□□□□□ -0.66
GTF3C1-203ENST00000562609 YAE1D1Q9NRH1 226 aa10.93□□□□□ -0.66
GTF3C1-203ENST00000562609 HIGD1AQ9Y241 93 aa10.93□□□□□ -0.66
GTF3C1-203ENST00000562609 NDUFB3O43676 98 aa10.93□□□□□ -0.66
GTF3C1-203ENST00000562609 LYZP61626 148 aa10.93□□□□□ -0.66
GTF3C1-203ENST00000562609 MRPL20Q9BYC9 149 aaKnown RBP10.93□□□□□ -0.66
GTF3C1-203ENST00000562609 CRLF1O75462 422 aa10.92□□□□□ -0.66
GTF3C1-203ENST00000562609 TRGV9Q99603 122 aa10.92□□□□□ -0.66
GTF3C1-203ENST00000562609 SLC25A39Q9BZJ4 359 aaPredicted RBP10.92□□□□□ -0.66
GTF3C1-203ENST00000562609 INS-IGF2F8WCM5 200 aa10.92□□□□□ -0.66
GTF3C1-203ENST00000562609 TCL1BO95988 128 aa10.91□□□□□ -0.66
GTF3C1-203ENST00000562609 UBE2D3P61077 147 aa10.91□□□□□ -0.66
GTF3C1-203ENST00000562609 UBE2D2P62837 147 aa10.91□□□□□ -0.66
GTF3C1-203ENST00000562609 ADORA2A-AS1P86434 159 aa10.91□□□□□ -0.66
GTF3C1-203ENST00000562609 KLRB1Q12918 225 aa10.91□□□□□ -0.66
GTF3C1-203ENST00000562609 NXT2Q9NPJ8 142 aaKnown RBP10.91□□□□□ -0.66
GTF3C1-203ENST00000562609 MSRB1Q9NZV6 116 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms