RNA–Protein interactions for RNA: ENST00000560867.1

HMG20A-211, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-211ENST00000560867 CCDC88AQ3V6T2 1871 aa1.22□□□□□ -2.21
HMG20A-211ENST00000560867 TNS3Q68CZ2 1445 aa1.22□□□□□ -2.21
HMG20A-211ENST00000560867 KIAA1107Q9UPP5 1409 aa1.22□□□□□ -2.21
HMG20A-211ENST00000560867 CHD6Q8TD26 2715 aa1.22□□□□□ -2.21
HMG20A-211ENST00000560867 UBR2Q8IWV8 1755 aa1.21□□□□□ -2.22
HMG20A-211ENST00000560867 EML6Q6ZMW3 1958 aa1.21□□□□□ -2.22
HMG20A-211ENST00000560867 C2CD3Q4AC94 2353 aa1.21□□□□□ -2.22
HMG20A-211ENST00000560867 NUP210LQ5VU65 1888 aa1.21□□□□□ -2.22
HMG20A-211ENST00000560867 COL1A1P02452 1464 aaPredicted RBP1.21□□□□□ -2.22
HMG20A-211ENST00000560867 WDR7Q9Y4E6 1490 aa1.21□□□□□ -2.22
HMG20A-211ENST00000560867 LOC100130705A0A1B0GUX0 176 aa1.21□□□□□ -2.22
HMG20A-211ENST00000560867 A6NN06 94 aa1.21□□□□□ -2.22
HMG20A-211ENST00000560867 TRACP01848 142 aa1.21□□□□□ -2.22
HMG20A-211ENST00000560867 SAA1P0DJI8 122 aaPredicted RBP1.21□□□□□ -2.22
HMG20A-211ENST00000560867 PDE6HQ13956 83 aa1.21□□□□□ -2.22
HMG20A-211ENST00000560867 GLIPR1L1Q6UWM5 242 aa1.21□□□□□ -2.22
HMG20A-211ENST00000560867 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.21□□□□□ -2.22
HMG20A-211ENST00000560867 LINC00269Q8N2A0 174 aa1.21□□□□□ -2.22
HMG20A-211ENST00000560867 FAM19A2Q8N3H0 131 aa1.21□□□□□ -2.22
HMG20A-211ENST00000560867 HEATR5AQ86XA9 2040 aa1.21□□□□□ -2.22
HMG20A-211ENST00000560867 NUP98P52948 1817 aa1.21□□□□□ -2.22
HMG20A-211ENST00000560867 ZDBF2Q9HCK1 2354 aa1.21□□□□□ -2.22
HMG20A-211ENST00000560867 SCN8AQ9UQD0 1980 aa1.21□□□□□ -2.22
HMG20A-211ENST00000560867 JMJD1CQ15652 2540 aa1.21□□□□□ -2.22
HMG20A-211ENST00000560867 N4BP2Q86UW6 1770 aaPredicted RBP1.21□□□□□ -2.22
HMG20A-211ENST00000560867 FER1L6Q2WGJ9 1857 aa1.2□□□□□ -2.22
HMG20A-211ENST00000560867 PCDH15Q96QU1 1955 aa1.2□□□□□ -2.22
HMG20A-211ENST00000560867 LOC107986453A0A1B0GWG9 222 aa1.2□□□□□ -2.22
HMG20A-211ENST00000560867 TCRBV4S1A1TA0A5B7 111 aa1.2□□□□□ -2.22
HMG20A-211ENST00000560867 FAM92AA1XBS5 289 aa1.2□□□□□ -2.22
HMG20A-211ENST00000560867 FAM25AB3EWG3 89 aa1.2□□□□□ -2.22
HMG20A-211ENST00000560867 FAM25CB3EWG5 89 aa1.2□□□□□ -2.22
HMG20A-211ENST00000560867 FAM25GB3EWG6 89 aa1.2□□□□□ -2.22
HMG20A-211ENST00000560867 ATP6V1G2-DDX39BF2Z307 99 aa1.2□□□□□ -2.22
HMG20A-211ENST00000560867 C5orf67F2Z3F1 127 aa1.2□□□□□ -2.22
HMG20A-211ENST00000560867 M0R129 80 aa1.2□□□□□ -2.22
HMG20A-211ENST00000560867 IFNGP01579 166 aa1.2□□□□□ -2.22
HMG20A-211ENST00000560867 HIST1H1BP16401 226 aaKnown RBP1.2□□□□□ -2.22
HMG20A-211ENST00000560867 ZNF25P17030 456 aaPredicted RBP1.2□□□□□ -2.22
HMG20A-211ENST00000560867 S100PP25815 95 aa1.2□□□□□ -2.22
HMG20A-211ENST00000560867 LSM3P62310 102 aaKnown RBP1.2□□□□□ -2.22
HMG20A-211ENST00000560867 PLGLB1Q02325 96 aa1.2□□□□□ -2.22
HMG20A-211ENST00000560867 WHAMMP3Q1A5X7 153 aa1.2□□□□□ -2.22
HMG20A-211ENST00000560867 CCSMST1Q4G0I0 132 aa1.2□□□□□ -2.22
HMG20A-211ENST00000560867 CLLU1Q5K131 121 aa1.2□□□□□ -2.22
HMG20A-211ENST00000560867 KRTAP26-1Q6PEX3 210 aa1.2□□□□□ -2.22
HMG20A-211ENST00000560867 ARPINQ7Z6K5 226 aa1.2□□□□□ -2.22
HMG20A-211ENST00000560867 OTOSQ8NHW6 89 aa1.2□□□□□ -2.22
HMG20A-211ENST00000560867 Q8TAT8 98 aa1.2□□□□□ -2.22
HMG20A-211ENST00000560867 TMEM254Q8TBM7 123 aa1.2□□□□□ -2.22
HMG20A-211ENST00000560867 SFT2D1Q8WV19 159 aa1.2□□□□□ -2.22
HMG20A-211ENST00000560867 TMEM203Q969S6 136 aa1.2□□□□□ -2.22
HMG20A-211ENST00000560867 MUCL1Q96DR8 90 aa1.2□□□□□ -2.22
HMG20A-211ENST00000560867 SLC35B3Q9H1N7 401 aa1.2□□□□□ -2.22
HMG20A-211ENST00000560867 KDM6AO15550 1401 aaPredicted RBP1.2□□□□□ -2.22
HMG20A-211ENST00000560867 ARHGAP31Q2M1Z3 1444 aa1.2□□□□□ -2.22
HMG20A-211ENST00000560867 GLI3P10071 1580 aa1.2□□□□□ -2.22
HMG20A-211ENST00000560867 SBF1O95248 1867 aa1.2□□□□□ -2.22
HMG20A-211ENST00000560867 MYO9AB2RTY4 2548 aa1.2□□□□□ -2.22
HMG20A-211ENST00000560867 PIK3C2AO00443 1686 aa1.2□□□□□ -2.22
HMG20A-211ENST00000560867 TAF1LQ8IZX4 1826 aa1.19□□□□□ -2.22
HMG20A-211ENST00000560867 UBR4Q5T4S7 5183 aa1.19□□□□□ -2.22
HMG20A-211ENST00000560867 TRBV20-1A0A075B6N2 111 aa1.19□□□□□ -2.22
HMG20A-211ENST00000560867 TRAV10A0A0B4J240 114 aa1.19□□□□□ -2.22
HMG20A-211ENST00000560867 C9orf170A2RU37 121 aa1.19□□□□□ -2.22
HMG20A-211ENST00000560867 HCRTO43612 131 aa1.19□□□□□ -2.22
HMG20A-211ENST00000560867 PITX3O75364 302 aa1.19□□□□□ -2.22
HMG20A-211ENST00000560867 KDM5CP41229 1560 aa1.19□□□□□ -2.22
HMG20A-211ENST00000560867 PCBD1P61457 104 aa1.19□□□□□ -2.22
HMG20A-211ENST00000560867 CNBPP62633 177 aaKnown RBP1.19□□□□□ -2.22
HMG20A-211ENST00000560867 CIRBPQ14011 172 aaKnown RBP1.19□□□□□ -2.22
HMG20A-211ENST00000560867 ASB16-AS1Q495Z4 193 aa1.19□□□□□ -2.22
HMG20A-211ENST00000560867 OCIAD2Q56VL3 154 aa1.19□□□□□ -2.22
HMG20A-211ENST00000560867 C1orf137Q5JT78 98 aa1.19□□□□□ -2.22
HMG20A-211ENST00000560867 IZUMO2Q6UXV1 221 aa1.19□□□□□ -2.22
HMG20A-211ENST00000560867 CLECL1Q8IZS7 167 aa1.19□□□□□ -2.22
HMG20A-211ENST00000560867 OR5AS1Q8N127 324 aa1.19□□□□□ -2.22
HMG20A-211ENST00000560867 C10orf111Q8N326 155 aa1.19□□□□□ -2.22
HMG20A-211ENST00000560867 OR5AK2Q8NH90 309 aa1.19□□□□□ -2.22
HMG20A-211ENST00000560867 TTC28Q96AY4 2481 aa1.19□□□□□ -2.22
HMG20A-211ENST00000560867 TMEM191AQ9H0A3 160 aa1.19□□□□□ -2.22
HMG20A-211ENST00000560867 CST11Q9H112 138 aa1.19□□□□□ -2.22
HMG20A-211ENST00000560867 METTL1Q9UBP6 276 aaKnown RBP1.19□□□□□ -2.22
HMG20A-211ENST00000560867 TPRP12270 2363 aaKnown RBP1.19□□□□□ -2.22
HMG20A-211ENST00000560867 ANKRD31Q8N7Z5 1873 aa1.18□□□□□ -2.22
HMG20A-211ENST00000560867 A0A0G2JMM0 328 aa1.18□□□□□ -2.22
HMG20A-211ENST00000560867 A0A1W2PPB8 328 aa1.18□□□□□ -2.22
HMG20A-211ENST00000560867 KIR3DP1A8MWS1 328 aa1.18□□□□□ -2.22
HMG20A-211ENST00000560867 CDC42EP2O14613 210 aa1.18□□□□□ -2.22
HMG20A-211ENST00000560867 ERC2-IT1O76042 136 aa1.18□□□□□ -2.22
HMG20A-211ENST00000560867 CKS2P33552 79 aa1.18□□□□□ -2.22
HMG20A-211ENST00000560867 ETV6P41212 452 aa1.18□□□□□ -2.22
HMG20A-211ENST00000560867 MIR22HGQ0VDD5 57 aa1.18□□□□□ -2.22
HMG20A-211ENST00000560867 FOXI2Q6ZQN5 318 aa1.18□□□□□ -2.22
HMG20A-211ENST00000560867 ZNF833PQ6ZTB9 187 aa1.18□□□□□ -2.22
HMG20A-211ENST00000560867 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.18□□□□□ -2.22
HMG20A-211ENST00000560867 DPH3Q96FX2 82 aa1.18□□□□□ -2.22
HMG20A-211ENST00000560867 C12orf57Q99622 126 aa1.18□□□□□ -2.22
HMG20A-211ENST00000560867 MRPL57Q9BQC6 102 aaKnown RBP1.18□□□□□ -2.22
HMG20A-211ENST00000560867 GNG8Q9UK08 70 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms