RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 PRR27Q6MZM9 219 aa8.38□□□□□ -1.07
SNX1-212ENST00000560861 AMTNQ6UX39 209 aa8.38□□□□□ -1.07
SNX1-212ENST00000560861 ZNF575Q86XF7 245 aa8.38□□□□□ -1.07
SNX1-212ENST00000560861 C15orf54Q8N8G6 183 aa8.38□□□□□ -1.07
SNX1-212ENST00000560861 ODF3Q96PU9 254 aa8.38□□□□□ -1.07
SNX1-212ENST00000560861 IL36BQ9NZH7 164 aa8.38□□□□□ -1.07
SNX1-212ENST00000560861 TRBV24-1A0A075B6N3 115 aa8.37□□□□□ -1.07
SNX1-212ENST00000560861 SMIM27A0A1W2PRY6 76 aa8.37□□□□□ -1.07
SNX1-212ENST00000560861 WIPF1O43516 503 aa8.37□□□□□ -1.07
SNX1-212ENST00000560861 GATCO43716 136 aaKnown RBP8.37□□□□□ -1.07
SNX1-212ENST00000560861 SH2D1AO60880 128 aa8.37□□□□□ -1.07
SNX1-212ENST00000560861 DEFB131AP59861 70 aa8.37□□□□□ -1.07
SNX1-212ENST00000560861 SMUG1Q53HV7 270 aa8.37□□□□□ -1.07
SNX1-212ENST00000560861 SHISA2Q6UWI4 295 aa8.37□□□□□ -1.07
SNX1-212ENST00000560861 OR4B1Q8NGF8 309 aa8.37□□□□□ -1.07
SNX1-212ENST00000560861 NDFIP1Q9BT67 221 aa8.37□□□□□ -1.07
SNX1-212ENST00000560861 RPP21Q9H633 154 aaKnown RBP8.37□□□□□ -1.07
SNX1-212ENST00000560861 C19orf73Q9NVV2 129 aa8.37□□□□□ -1.07
SNX1-212ENST00000560861 RBMY1BA6NDE4 496 aaKnown RBP8.36□□□□□ -1.07
SNX1-212ENST00000560861 RBMY1EA6NEQ0 496 aaKnown RBP8.36□□□□□ -1.07
SNX1-212ENST00000560861 KLLNB2CW77 178 aa8.36□□□□□ -1.07
SNX1-212ENST00000560861 LCE2BO14633 110 aa8.36□□□□□ -1.07
SNX1-212ENST00000560861 CXCL1P09341 107 aa8.36□□□□□ -1.07
SNX1-212ENST00000560861 RBMY1DP0C7P1 496 aaKnown RBP8.36□□□□□ -1.07
SNX1-212ENST00000560861 HLA-DRB4P13762 266 aa8.36□□□□□ -1.07
SNX1-212ENST00000560861 INSL3P51460 131 aa8.36□□□□□ -1.07
SNX1-212ENST00000560861 CLUHP3Q96NS8 147 aa8.36□□□□□ -1.07
SNX1-212ENST00000560861 FAM110AQ9BQ89 295 aa8.36□□□□□ -1.07
SNX1-212ENST00000560861 C11orf21Q9P2W6 132 aa8.36□□□□□ -1.07
SNX1-212ENST00000560861 HLA-DRB4X5D2U9 266 aa8.36□□□□□ -1.07
SNX1-212ENST00000560861 TGIF2-C20orf24A0A0A6YYL0 155 aa8.35□□□□□ -1.07
SNX1-212ENST00000560861 KNCNA6PVL3 124 aa8.35□□□□□ -1.07
SNX1-212ENST00000560861 ZNF705GA8MUZ8 300 aaPredicted RBP8.35□□□□□ -1.07
SNX1-212ENST00000560861 H3BMM0 161 aa8.35□□□□□ -1.07
SNX1-212ENST00000560861 DUSP14O95147 198 aaKnown RBP8.35□□□□□ -1.07
SNX1-212ENST00000560861 CA1P00915 261 aaPredicted RBP8.35□□□□□ -1.07
SNX1-212ENST00000560861 P01737 135 aa8.35□□□□□ -1.07
SNX1-212ENST00000560861 CD33P20138 364 aa8.35□□□□□ -1.07
SNX1-212ENST00000560861 ZNF124Q15973 351 aa8.35□□□□□ -1.07
SNX1-212ENST00000560861 FAM162BQ5T6X4 162 aa8.35□□□□□ -1.07
SNX1-212ENST00000560861 C9orf66Q5T8R8 295 aa8.35□□□□□ -1.07
SNX1-212ENST00000560861 EBLN2Q6P2I7 272 aa8.35□□□□□ -1.07
SNX1-212ENST00000560861 C12orf54Q6X4T0 127 aa8.35□□□□□ -1.07
SNX1-212ENST00000560861 TSKUQ8WUA8 353 aa8.35□□□□□ -1.07
SNX1-212ENST00000560861 TRAV9-1A0A075B6T8 112 aa8.34□□□□□ -1.07
SNX1-212ENST00000560861 FABP5P3A8MUU1 101 aa8.34□□□□□ -1.07
SNX1-212ENST00000560861 FAM3BP58499 235 aaPredicted RBP8.34□□□□□ -1.07
SNX1-212ENST00000560861 RPL19P84098 196 aaKnown RBP8.34□□□□□ -1.07
SNX1-212ENST00000560861 KIR3DS1Q14943 382 aa8.34□□□□□ -1.07
SNX1-212ENST00000560861 LINC01559Q495D7 138 aa8.34□□□□□ -1.07
SNX1-212ENST00000560861 Q6AWC8 147 aa8.34□□□□□ -1.07
SNX1-212ENST00000560861 Q6ZQT7 251 aa8.34□□□□□ -1.07
SNX1-212ENST00000560861 C3orf56Q8N813 242 aa8.34□□□□□ -1.07
SNX1-212ENST00000560861 GTSF1Q8WW33 167 aa8.34□□□□□ -1.07
SNX1-212ENST00000560861 URGCP-MRPS24S4R325 110 aa8.34□□□□□ -1.07
SNX1-212ENST00000560861 FAM231BA6NCW3 169 aa8.33□□□□□ -1.08
SNX1-212ENST00000560861 TYMSP04818 313 aa8.33□□□□□ -1.08
SNX1-212ENST00000560861 LEPP41159 167 aa8.33□□□□□ -1.08
SNX1-212ENST00000560861 FOXA3P55318 350 aaPredicted RBP8.33□□□□□ -1.08
SNX1-212ENST00000560861 CMC4P56277 68 aaPredicted RBP8.33□□□□□ -1.08
SNX1-212ENST00000560861 ACTL10Q5JWF8 245 aa8.33□□□□□ -1.08
SNX1-212ENST00000560861 OR2D3Q8NGH3 330 aa8.33□□□□□ -1.08
SNX1-212ENST00000560861 DAZAP1Q96EP5 407 aaKnown RBP8.33□□□□□ -1.08
SNX1-212ENST00000560861 NEU1Q99519 415 aa8.33□□□□□ -1.08
SNX1-212ENST00000560861 MCRIP2Q9BUT9 160 aaKnown RBP8.33□□□□□ -1.08
SNX1-212ENST00000560861 GFRA4Q9GZZ7 299 aa8.33□□□□□ -1.08
SNX1-212ENST00000560861 TRRAPQ9Y4A5 3859 aa8.32□□□□□ -1.08
SNX1-212ENST00000560861 IGKV3D-20A0A0C4DH25 116 aa8.32□□□□□ -1.08
SNX1-212ENST00000560861 A8MWL6 223 aa8.32□□□□□ -1.08
SNX1-212ENST00000560861 OR11H12B2RN74 326 aa8.32□□□□□ -1.08
SNX1-212ENST00000560861 CD7P09564 240 aa8.32□□□□□ -1.08
SNX1-212ENST00000560861 RAB5AP20339 215 aa8.32□□□□□ -1.08
SNX1-212ENST00000560861 S100PP25815 95 aa8.32□□□□□ -1.08
SNX1-212ENST00000560861 KCNIP4Q6PIL6 250 aa8.32□□□□□ -1.08
SNX1-212ENST00000560861 TRPT1Q86TN4 253 aaKnown RBP8.32□□□□□ -1.08
SNX1-212ENST00000560861 A0A1W2PPQ1 181 aa8.31□□□□□ -1.08
SNX1-212ENST00000560861 TMEM189A5PLL7 270 aa8.31□□□□□ -1.08
SNX1-212ENST00000560861 CRXO43186 299 aaPredicted RBP8.31□□□□□ -1.08
SNX1-212ENST00000560861 IGLC6P0CF74 106 aa8.31□□□□□ -1.08
SNX1-212ENST00000560861 GZMBP10144 247 aa8.31□□□□□ -1.08
SNX1-212ENST00000560861 TCL1AP56279 114 aa8.31□□□□□ -1.08
SNX1-212ENST00000560861 RPS20P60866 119 aaKnown RBP8.31□□□□□ -1.08
SNX1-212ENST00000560861 GFI1BQ5VTD9 330 aa8.31□□□□□ -1.08
SNX1-212ENST00000560861 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.31□□□□□ -1.08
SNX1-212ENST00000560861 NUP35Q8NFH5 326 aa8.31□□□□□ -1.08
SNX1-212ENST00000560861 FAM210BQ96KR6 192 aa8.31□□□□□ -1.08
SNX1-212ENST00000560861 CMYA5Q8N3K9 4069 aa8.31□□□□□ -1.08
SNX1-212ENST00000560861 TRAV21A0A0B4J279 112 aa8.3□□□□□ -1.08
SNX1-212ENST00000560861 A0A1B0GXF2 115 aa8.3□□□□□ -1.08
SNX1-212ENST00000560861 C7orf71A4D174 169 aa8.3□□□□□ -1.08
SNX1-212ENST00000560861 HIGD1CA8MV81 97 aa8.3□□□□□ -1.08
SNX1-212ENST00000560861 M0R2Z0 102 aa8.3□□□□□ -1.08
SNX1-212ENST00000560861 ZNF324O75467 553 aaPredicted RBP8.3□□□□□ -1.08
SNX1-212ENST00000560861 IGKV3-20P01619 116 aa8.3□□□□□ -1.08
SNX1-212ENST00000560861 GPX1P07203 203 aa8.3□□□□□ -1.08
SNX1-212ENST00000560861 FRMD6-AS1P0C7T7 363 aa8.3□□□□□ -1.08
SNX1-212ENST00000560861 IGLL1P15814 213 aa8.3□□□□□ -1.08
SNX1-212ENST00000560861 TSPOP30536 169 aa8.3□□□□□ -1.08
SNX1-212ENST00000560861 RNASE4P34096 147 aaKnown RBP8.3□□□□□ -1.08
SNX1-212ENST00000560861 CDKN1BP46527 198 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms