RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 LINC01619G3V211 115 aa5.17□□□□□ -1.58
TSPAN3-209ENST00000560715 TSHBP01222 138 aa5.17□□□□□ -1.58
TSPAN3-209ENST00000560715 C1orf195Q5TG92 126 aa5.17□□□□□ -1.58
TSPAN3-209ENST00000560715 FAM19A5Q7Z5A7 132 aaPredicted RBP5.17□□□□□ -1.58
TSPAN3-209ENST00000560715 ANKRD29Q8N6D5 301 aa5.17□□□□□ -1.58
TSPAN3-209ENST00000560715 SLC25A2Q9BXI2 301 aa5.17□□□□□ -1.58
TSPAN3-209ENST00000560715 PROK2Q9HC23 129 aa5.17□□□□□ -1.58
TSPAN3-209ENST00000560715 LOC107984640A0A0U1RRK4 108 aa5.17□□□□□ -1.58
TSPAN3-209ENST00000560715 C15orf65H3BRN8 121 aa5.17□□□□□ -1.58
TSPAN3-209ENST00000560715 J3KT08 172 aa5.17□□□□□ -1.58
TSPAN3-209ENST00000560715 IGHV3-9P01782 118 aa5.17□□□□□ -1.58
TSPAN3-209ENST00000560715 LIFP15018 202 aa5.17□□□□□ -1.58
TSPAN3-209ENST00000560715 LYRM7Q5U5X0 104 aa5.17□□□□□ -1.58
TSPAN3-209ENST00000560715 Q6ZQT7 251 aa5.17□□□□□ -1.58
TSPAN3-209ENST00000560715 ITLN1Q8WWA0 313 aa5.17□□□□□ -1.58
TSPAN3-209ENST00000560715 A0A1B0GX51 115 aa5.16□□□□□ -1.58
TSPAN3-209ENST00000560715 IGKCP01834 107 aa5.16□□□□□ -1.58
TSPAN3-209ENST00000560715 CCL3P10147 92 aa5.16□□□□□ -1.58
TSPAN3-209ENST00000560715 ZNF32P17041 273 aa5.16□□□□□ -1.58
TSPAN3-209ENST00000560715 UBE2D3P61077 147 aa5.16□□□□□ -1.58
TSPAN3-209ENST00000560715 UBE2D2P62837 147 aa5.16□□□□□ -1.58
TSPAN3-209ENST00000560715 LPAL2Q16609 132 aa5.16□□□□□ -1.58
TSPAN3-209ENST00000560715 C21orf62Q9NYP8 219 aa5.16□□□□□ -1.58
TSPAN3-209ENST00000560715 TRAV8-2A0A0B4J237 113 aa5.16□□□□□ -1.58
TSPAN3-209ENST00000560715 LOC389332A0A1B0GUA5 103 aa5.16□□□□□ -1.58
TSPAN3-209ENST00000560715 A0A1B0GUT8 65 aa5.16□□□□□ -1.58
TSPAN3-209ENST00000560715 LYRM9A8MSI8 78 aa5.16□□□□□ -1.58
TSPAN3-209ENST00000560715 C9JAW5 83 aa5.16□□□□□ -1.58
TSPAN3-209ENST00000560715 MYCNOSP40205 109 aa5.16□□□□□ -1.58
TSPAN3-209ENST00000560715 SRSF9Q13242 221 aaKnown RBP eCLIP5.16□□□□□ -1.58
TSPAN3-209ENST00000560715 GTSCR1Q86UQ5 136 aa5.16□□□□□ -1.58
TSPAN3-209ENST00000560715 LINC00477Q96M19 166 aa5.16□□□□□ -1.58
TSPAN3-209ENST00000560715 EPDR1Q9UM22 224 aa5.16□□□□□ -1.58
TSPAN3-209ENST00000560715 HIGD1AQ9Y241 93 aa5.16□□□□□ -1.58
TSPAN3-209ENST00000560715 U3KQK5 164 aa5.16□□□□□ -1.58
TSPAN3-209ENST00000560715 DOCK7Q96N67 2140 aa5.15□□□□□ -1.58
TSPAN3-209ENST00000560715 MYMXA0A1B0GTQ4 84 aa5.15□□□□□ -1.58
TSPAN3-209ENST00000560715 DUSP14O95147 198 aaKnown RBP5.15□□□□□ -1.58
TSPAN3-209ENST00000560715 LORP23490 312 aaPredicted RBP5.15□□□□□ -1.58
TSPAN3-209ENST00000560715 FCER1GP30273 86 aa5.15□□□□□ -1.58
TSPAN3-209ENST00000560715 GNG5P63218 68 aa5.15□□□□□ -1.58
TSPAN3-209ENST00000560715 ZFP2Q6ZN57 461 aa5.15□□□□□ -1.58
TSPAN3-209ENST00000560715 OR13C6PQ8NH95 151 aa5.15□□□□□ -1.58
TSPAN3-209ENST00000560715 WDFY4Q6ZS81 3184 aa5.15□□□□□ -1.58
TSPAN3-209ENST00000560715 PATE4P0C8F1 98 aa5.15□□□□□ -1.59
TSPAN3-209ENST00000560715 SCGB1C2P0DMR2 95 aa5.15□□□□□ -1.59
TSPAN3-209ENST00000560715 FXYD7P58549 80 aa5.15□□□□□ -1.59
TSPAN3-209ENST00000560715 ZC2HC1BQ5TFG8 222 aa5.15□□□□□ -1.59
TSPAN3-209ENST00000560715 MORN5Q5VZ52 161 aa5.15□□□□□ -1.59
TSPAN3-209ENST00000560715 C3orf56Q8N813 242 aa5.15□□□□□ -1.59
TSPAN3-209ENST00000560715 PAXXQ9BUH6 204 aa5.15□□□□□ -1.59
TSPAN3-209ENST00000560715 OR2H1Q9GZK4 316 aa5.15□□□□□ -1.59
TSPAN3-209ENST00000560715 PIEZO1Q92508 2521 aa5.15□□□□□ -1.59
TSPAN3-209ENST00000560715 IGKV1OR2-108A0A075B7D4 117 aa5.14□□□□□ -1.59
TSPAN3-209ENST00000560715 IGLV5-45A0A087WSX0 123 aa5.14□□□□□ -1.59
TSPAN3-209ENST00000560715 TMSB15BA0A087X1C1 80 aa5.14□□□□□ -1.59
TSPAN3-209ENST00000560715 LOC107984156A0A0G2JMH3 177 aa5.14□□□□□ -1.59
TSPAN3-209ENST00000560715 NPFFO15130 113 aa5.14□□□□□ -1.59
TSPAN3-209ENST00000560715 PDPNQ86YL7 162 aa5.14□□□□□ -1.59
TSPAN3-209ENST00000560715 ARL17AQ8IVW1 177 aa5.14□□□□□ -1.59
TSPAN3-209ENST00000560715 TMEM101Q96IK0 257 aa5.14□□□□□ -1.59
TSPAN3-209ENST00000560715 DUX3Q96PT4 197 aa5.14□□□□□ -1.59
TSPAN3-209ENST00000560715 D6R8Y8 96 aa5.14□□□□□ -1.59
TSPAN3-209ENST00000560715 DPM2O94777 84 aa5.14□□□□□ -1.59
TSPAN3-209ENST00000560715 ARMS2P0C7Q2 107 aa5.14□□□□□ -1.59
TSPAN3-209ENST00000560715 PYYP10082 97 aa5.14□□□□□ -1.59
TSPAN3-209ENST00000560715 LINC00205P59089 165 aa5.14□□□□□ -1.59
TSPAN3-209ENST00000560715 RPS28P62857 69 aaKnown RBP5.14□□□□□ -1.59
TSPAN3-209ENST00000560715 Q0VFX4 171 aa5.14□□□□□ -1.59
TSPAN3-209ENST00000560715 ZNF493Q6ZR52 646 aa5.14□□□□□ -1.59
TSPAN3-209ENST00000560715 FMC1Q96HJ9 113 aa5.14□□□□□ -1.59
TSPAN3-209ENST00000560715 ODF3Q96PU9 254 aa5.14□□□□□ -1.59
TSPAN3-209ENST00000560715 PROCRQ9UNN8 238 aa5.14□□□□□ -1.59
TSPAN3-209ENST00000560715 LINC01549A6NIU2 74 aa5.14□□□□□ -1.59
TSPAN3-209ENST00000560715 H3BVH4 76 aa5.14□□□□□ -1.59
TSPAN3-209ENST00000560715 M0R1B8 84 aa5.14□□□□□ -1.59
TSPAN3-209ENST00000560715 MRPS12O15235 138 aaKnown RBP5.14□□□□□ -1.59
TSPAN3-209ENST00000560715 OR2H2O95918 312 aa5.14□□□□□ -1.59
TSPAN3-209ENST00000560715 TCL1BO95988 128 aa5.14□□□□□ -1.59
TSPAN3-209ENST00000560715 NPYP01303 97 aa5.14□□□□□ -1.59
TSPAN3-209ENST00000560715 ERVK-16P61578 105 aa5.14□□□□□ -1.59
TSPAN3-209ENST00000560715 C15orf53Q8NAA6 179 aa5.14□□□□□ -1.59
TSPAN3-209ENST00000560715 TRGV9Q99603 122 aa5.14□□□□□ -1.59
TSPAN3-209ENST00000560715 PRADC1Q9BSG0 188 aa5.14□□□□□ -1.59
TSPAN3-209ENST00000560715 CHCHD5Q9BSY4 110 aa5.14□□□□□ -1.59
TSPAN3-209ENST00000560715 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.14□□□□□ -1.59
TSPAN3-209ENST00000560715 PCSK5Q92824 1860 aa5.13□□□□□ -1.59
TSPAN3-209ENST00000560715 SDK2Q58EX2 2172 aa5.13□□□□□ -1.59
TSPAN3-209ENST00000560715 IGLV5-52A0A0A0MRZ9 124 aa5.13□□□□□ -1.59
TSPAN3-209ENST00000560715 A0A0J9YW62 118 aa5.13□□□□□ -1.59
TSPAN3-209ENST00000560715 M0R2P5 195 aa5.13□□□□□ -1.59
TSPAN3-209ENST00000560715 CDX4O14627 284 aaPredicted RBP5.13□□□□□ -1.59
TSPAN3-209ENST00000560715 PCBD1P61457 104 aa5.13□□□□□ -1.59
TSPAN3-209ENST00000560715 TWIST1Q15672 202 aa5.13□□□□□ -1.59
TSPAN3-209ENST00000560715 FAM53AQ6NSI3 398 aaPredicted RBP5.13□□□□□ -1.59
TSPAN3-209ENST00000560715 ORMDL3Q8N138 153 aa5.13□□□□□ -1.59
TSPAN3-209ENST00000560715 FXYD5Q96DB9 178 aa5.13□□□□□ -1.59
TSPAN3-209ENST00000560715 TP53TG1Q9Y2A0 90 aa5.13□□□□□ -1.59
TSPAN3-209ENST00000560715 HCFC1P51610 2035 aa5.13□□□□□ -1.59
TSPAN3-209ENST00000560715 VPS13AQ96RL7 3174 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms