RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 RND2P52198 227 aa6.92□□□□□ -1.3
TPM1-225ENST00000560679 XGP55808 180 aa6.92□□□□□ -1.3
TPM1-225ENST00000560679 TAS2R45P59539 299 aa6.92□□□□□ -1.3
TPM1-225ENST00000560679 DAD1P61803 113 aa6.92□□□□□ -1.3
TPM1-225ENST00000560679 SNRPD3P62318 126 aaKnown RBP6.92□□□□□ -1.3
TPM1-225ENST00000560679 SELENOTP62341 195 aa6.92□□□□□ -1.3
TPM1-225ENST00000560679 RPL23P62829 140 aaKnown RBP6.92□□□□□ -1.3
TPM1-225ENST00000560679 MLANAQ16655 118 aa6.92□□□□□ -1.3
TPM1-225ENST00000560679 TIGITQ495A1 244 aa6.92□□□□□ -1.3
TPM1-225ENST00000560679 FAM78BQ5VT40 261 aa6.92□□□□□ -1.3
TPM1-225ENST00000560679 CST9LP1Q5W188 147 aa6.92□□□□□ -1.3
TPM1-225ENST00000560679 C1orf158Q8N1D5 194 aa6.92□□□□□ -1.3
TPM1-225ENST00000560679 LYPD1Q8N2G4 141 aa6.92□□□□□ -1.3
TPM1-225ENST00000560679 OR4X1Q8NH49 305 aa6.92□□□□□ -1.3
TPM1-225ENST00000560679 NPIPB3Q92617 1050 aa6.92□□□□□ -1.3
TPM1-225ENST00000560679 SEPSECSQ9HD40 501 aaKnown RBP6.92□□□□□ -1.3
TPM1-225ENST00000560679 TMEM167BQ9NRX6 74 aa6.92□□□□□ -1.3
TPM1-225ENST00000560679 TMEM242Q9NWH2 141 aa6.92□□□□□ -1.3
TPM1-225ENST00000560679 DOK5Q9P104 306 aa6.92□□□□□ -1.3
TPM1-225ENST00000560679 IGKV1D-37A0A075B6S9 117 aa6.91□□□□□ -1.3
TPM1-225ENST00000560679 COX7A2P2O60397 106 aa6.91□□□□□ -1.3
TPM1-225ENST00000560679 BTF3P20290 206 aaKnown RBP6.91□□□□□ -1.3
TPM1-225ENST00000560679 GATA2P23769 480 aaPredicted RBP6.91□□□□□ -1.3
TPM1-225ENST00000560679 USF2Q15853 346 aaPredicted RBP6.91□□□□□ -1.3
TPM1-225ENST00000560679 PQLC2Q6ZP29 291 aa6.91□□□□□ -1.3
TPM1-225ENST00000560679 OR1L4Q8NGR5 311 aa6.91□□□□□ -1.3
TPM1-225ENST00000560679 C11orf52Q96A22 123 aa6.91□□□□□ -1.3
TPM1-225ENST00000560679 C18orf15Q96N68 181 aa6.91□□□□□ -1.3
TPM1-225ENST00000560679 UHRF2Q96PU4 802 aa6.91□□□□□ -1.3
TPM1-225ENST00000560679 PFDN5Q99471 154 aa6.91□□□□□ -1.3
TPM1-225ENST00000560679 NRN1Q9NPD7 142 aa6.91□□□□□ -1.3
TPM1-225ENST00000560679 BIN3Q9NQY0 253 aa6.91□□□□□ -1.3
TPM1-225ENST00000560679 DNAH8Q96JB1 4490 aa6.91□□□□□ -1.3
TPM1-225ENST00000560679 H7BYZ3 331 aa6.9□□□□□ -1.3
TPM1-225ENST00000560679 FUSP35637 526 aaKnown RBP eCLIP6.9□□□□□ -1.3
TPM1-225ENST00000560679 ELOBQ15370 118 aa6.9□□□□□ -1.3
TPM1-225ENST00000560679 OR51G1Q8NGK1 321 aa6.9□□□□□ -1.3
TPM1-225ENST00000560679 Q8WTZ3 238 aa6.9□□□□□ -1.3
TPM1-225ENST00000560679 TRGV9Q99603 122 aa6.9□□□□□ -1.3
TPM1-225ENST00000560679 SAV1Q9H4B6 383 aaPredicted RBP6.9□□□□□ -1.3
TPM1-225ENST00000560679 SCO2A0A1W2PP80 73 aa6.89□□□□□ -1.31
TPM1-225ENST00000560679 OR7C2O60412 319 aa6.89□□□□□ -1.31
TPM1-225ENST00000560679 NDUFB4O95168 129 aa6.89□□□□□ -1.31
TPM1-225ENST00000560679 NUDT3O95989 172 aa6.89□□□□□ -1.31
TPM1-225ENST00000560679 PRM2P04554 102 aa6.89□□□□□ -1.31
TPM1-225ENST00000560679 IGLC1P0CG04 106 aa6.89□□□□□ -1.31
TPM1-225ENST00000560679 C10orf113Q5VZT2 155 aa6.89□□□□□ -1.31
TPM1-225ENST00000560679 SIGLEC15Q6ZMC9 328 aa6.89□□□□□ -1.31
TPM1-225ENST00000560679 ZFP82Q8N141 532 aa6.89□□□□□ -1.31
TPM1-225ENST00000560679 TMEM37Q8WXS4 190 aa6.89□□□□□ -1.31
TPM1-225ENST00000560679 ZNF503Q96F45 646 aa6.89□□□□□ -1.31
TPM1-225ENST00000560679 FAM167A-AS1Q96KT0 104 aa6.89□□□□□ -1.31
TPM1-225ENST00000560679 CLUHP3Q96NS8 147 aa6.89□□□□□ -1.31
TPM1-225ENST00000560679 Q9H3A6 140 aa6.89□□□□□ -1.31
TPM1-225ENST00000560679 DNAJC4Q9NNZ3 241 aa6.89□□□□□ -1.31
TPM1-225ENST00000560679 GOLT1BQ9Y3E0 138 aa6.89□□□□□ -1.31
TPM1-225ENST00000560679 TRBV24-1A0A075B6N3 115 aa6.88□□□□□ -1.31
TPM1-225ENST00000560679 TGIF2-C20orf24A0A0A6YYL0 155 aa6.88□□□□□ -1.31
TPM1-225ENST00000560679 BUB3O43684 328 aa6.88□□□□□ -1.31
TPM1-225ENST00000560679 CXCL1P09341 107 aa6.88□□□□□ -1.31
TPM1-225ENST00000560679 RPS10P46783 165 aaKnown RBP6.88□□□□□ -1.31
TPM1-225ENST00000560679 UBE2L3P68036 154 aaKnown RBP6.88□□□□□ -1.31
TPM1-225ENST00000560679 ZNF90Q03938 601 aa6.88□□□□□ -1.31
TPM1-225ENST00000560679 RRN3P1Q2M238 152 aa6.88□□□□□ -1.31
TPM1-225ENST00000560679 PATE2Q6UY27 113 aa6.88□□□□□ -1.31
TPM1-225ENST00000560679 FOXI2Q6ZQN5 318 aa6.88□□□□□ -1.31
TPM1-225ENST00000560679 LINC01551Q86U37 167 aa6.88□□□□□ -1.31
TPM1-225ENST00000560679 ANAPC16Q96DE5 110 aa6.88□□□□□ -1.31
TPM1-225ENST00000560679 DERL1Q9BUN8 251 aa6.88□□□□□ -1.31
TPM1-225ENST00000560679 SLC25A2Q9BXI2 301 aa6.88□□□□□ -1.31
TPM1-225ENST00000560679 URGCP-MRPS24S4R325 110 aa6.88□□□□□ -1.31
TPM1-225ENST00000560679 A0A1W2PRE2 83 aa6.87□□□□□ -1.31
TPM1-225ENST00000560679 PLAC8L1A1L4L8 177 aa6.87□□□□□ -1.31
TPM1-225ENST00000560679 LYRM9A8MSI8 78 aa6.87□□□□□ -1.31
TPM1-225ENST00000560679 C9JCJ5 164 aa6.87□□□□□ -1.31
TPM1-225ENST00000560679 F5H768 121 aa6.87□□□□□ -1.31
TPM1-225ENST00000560679 F6UB75 175 aa6.87□□□□□ -1.31
TPM1-225ENST00000560679 SOCS3O14543 225 aa6.87□□□□□ -1.31
TPM1-225ENST00000560679 PPP1R2P9O14990 202 aa6.87□□□□□ -1.31
TPM1-225ENST00000560679 IL4P05112 153 aa6.87□□□□□ -1.31
TPM1-225ENST00000560679 FABP1P07148 127 aa6.87□□□□□ -1.31
TPM1-225ENST00000560679 S100PP25815 95 aa6.87□□□□□ -1.31
TPM1-225ENST00000560679 CCL18P55774 89 aa6.87□□□□□ -1.31
TPM1-225ENST00000560679 PLP1P60201 277 aa6.87□□□□□ -1.31
TPM1-225ENST00000560679 SMUG1Q53HV7 270 aa6.87□□□□□ -1.31
TPM1-225ENST00000560679 Q6ZRN7 208 aaPredicted RBP6.87□□□□□ -1.31
TPM1-225ENST00000560679 OR4B1Q8NGF8 309 aa6.87□□□□□ -1.31
TPM1-225ENST00000560679 FRZBQ92765 325 aa6.87□□□□□ -1.31
TPM1-225ENST00000560679 PAXXQ9BUH6 204 aa6.87□□□□□ -1.31
TPM1-225ENST00000560679 Q9H8V8 135 aa6.87□□□□□ -1.31
TPM1-225ENST00000560679 LY96Q9Y6Y9 160 aa6.87□□□□□ -1.31
TPM1-225ENST00000560679 TRBV20OR9-2A0A075B6H5 130 aa6.86□□□□□ -1.31
TPM1-225ENST00000560679 TRAV5A0A0B4J249 113 aa6.86□□□□□ -1.31
TPM1-225ENST00000560679 A8MTW9 85 aa6.86□□□□□ -1.31
TPM1-225ENST00000560679 GGTLC3B5MD39 225 aa6.86□□□□□ -1.31
TPM1-225ENST00000560679 HYPMO75409 117 aa6.86□□□□□ -1.31
TPM1-225ENST00000560679 SCGB2A1O75556 95 aa6.86□□□□□ -1.31
TPM1-225ENST00000560679 S100A6P06703 90 aa6.86□□□□□ -1.31
TPM1-225ENST00000560679 PFN1P07737 140 aaKnown RBP6.86□□□□□ -1.31
TPM1-225ENST00000560679 DEFB130BP0DP73 79 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms