RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 HIST2H2BDQ6DRA6 164 aa6.72□□□□□ -1.33
CCDC33-209ENST00000560565 SIGLEC15Q6ZMC9 328 aa6.72□□□□□ -1.33
CCDC33-209ENST00000560565 LINC00322Q6ZN03 302 aaPredicted RBP6.72□□□□□ -1.33
CCDC33-209ENST00000560565 LINC00173Q6ZV60 143 aa6.72□□□□□ -1.33
CCDC33-209ENST00000560565 CEND1Q8N111 149 aa6.72□□□□□ -1.33
CCDC33-209ENST00000560565 FAM216BQ8N7L0 139 aa6.72□□□□□ -1.33
CCDC33-209ENST00000560565 DEFB108BQ8NET1 73 aa6.72□□□□□ -1.33
CCDC33-209ENST00000560565 RNF125Q96EQ8 232 aa6.72□□□□□ -1.33
CCDC33-209ENST00000560565 ZC2HC1AQ96GY0 325 aa6.72□□□□□ -1.33
CCDC33-209ENST00000560565 ATP6V0BQ99437 205 aa6.72□□□□□ -1.33
CCDC33-209ENST00000560565 ASCL2Q99929 193 aa6.72□□□□□ -1.33
CCDC33-209ENST00000560565 SMR3AQ99954 134 aa6.72□□□□□ -1.33
CCDC33-209ENST00000560565 SPATA25Q9BR10 227 aa6.72□□□□□ -1.33
CCDC33-209ENST00000560565 CHAC1Q9BUX1 264 aa6.72□□□□□ -1.33
CCDC33-209ENST00000560565 CNFNQ9BYD5 112 aa6.72□□□□□ -1.33
CCDC33-209ENST00000560565 TMEM133Q9H2Q1 129 aa6.72□□□□□ -1.33
CCDC33-209ENST00000560565 ZMAT4Q9H898 229 aa6.72□□□□□ -1.33
CCDC33-209ENST00000560565 HIF1ANQ9NWT6 349 aa6.72□□□□□ -1.33
CCDC33-209ENST00000560565 SIGLEC9Q9Y336 463 aa6.72□□□□□ -1.33
CCDC33-209ENST00000560565 TIMM8BQ9Y5J9 83 aaPredicted RBP6.72□□□□□ -1.33
CCDC33-209ENST00000560565 CR1P17927 2039 aa6.71□□□□□ -1.33
CCDC33-209ENST00000560565 RBAKDNA6NC62 111 aa6.71□□□□□ -1.34
CCDC33-209ENST00000560565 PRSS47A8MTI9 375 aa6.71□□□□□ -1.34
CCDC33-209ENST00000560565 RNF223E7ERA6 249 aa6.71□□□□□ -1.34
CCDC33-209ENST00000560565 LY6G6DO95868 133 aa6.71□□□□□ -1.34
CCDC33-209ENST00000560565 CLEC3BP05452 202 aa6.71□□□□□ -1.34
CCDC33-209ENST00000560565 CRYGBP07316 175 aa6.71□□□□□ -1.34
CCDC33-209ENST00000560565 PRSS1P07477 247 aa6.71□□□□□ -1.34
CCDC33-209ENST00000560565 SLC25A16P16260 332 aa6.71□□□□□ -1.34
CCDC33-209ENST00000560565 DSCR9P59020 149 aa6.71□□□□□ -1.34
CCDC33-209ENST00000560565 PAPPA-AS1Q5QFB9 102 aa6.71□□□□□ -1.34
CCDC33-209ENST00000560565 TMEM200BQ69YZ2 307 aa6.71□□□□□ -1.34
CCDC33-209ENST00000560565 CLEC2AQ6UVW9 174 aa6.71□□□□□ -1.34
CCDC33-209ENST00000560565 LYZL1Q6UWQ5 148 aa6.71□□□□□ -1.34
CCDC33-209ENST00000560565 Q71RC1 249 aaPredicted RBP6.71□□□□□ -1.34
CCDC33-209ENST00000560565 TPPP3Q9BW30 176 aa6.71□□□□□ -1.34
CCDC33-209ENST00000560565 INSIG2Q9Y5U4 225 aa6.71□□□□□ -1.34
CCDC33-209ENST00000560565 ARHGAP32A7KAX9 2087 aa6.71□□□□□ -1.34
CCDC33-209ENST00000560565 MXRA5Q9NR99 2828 aa6.7□□□□□ -1.34
CCDC33-209ENST00000560565 TRAV12-1A0A0B4J245 112 aa6.7□□□□□ -1.34
CCDC33-209ENST00000560565 PPIAL4CA0A0B4J2A2 164 aa6.7□□□□□ -1.34
CCDC33-209ENST00000560565 GAGE12HA6NDE8 117 aa6.7□□□□□ -1.34
CCDC33-209ENST00000560565 CGB1A6NKQ9 187 aa6.7□□□□□ -1.34
CCDC33-209ENST00000560565 FABP5P3A8MUU1 101 aa6.7□□□□□ -1.34
CCDC33-209ENST00000560565 E9PLD3 99 aa6.7□□□□□ -1.34
CCDC33-209ENST00000560565 I3L2K1 104 aa6.7□□□□□ -1.34
CCDC33-209ENST00000560565 SAP30O75446 220 aa6.7□□□□□ -1.34
CCDC33-209ENST00000560565 PPIAL4GP0DN37 164 aa6.7□□□□□ -1.34
CCDC33-209ENST00000560565 IGHV1-8P0DP01 117 aa6.7□□□□□ -1.34
CCDC33-209ENST00000560565 COL8A2P25067 703 aa6.7□□□□□ -1.34
CCDC33-209ENST00000560565 MFAP4P55083 255 aa6.7□□□□□ -1.34
CCDC33-209ENST00000560565 MRPL51Q4U2R6 128 aaKnown RBP6.7□□□□□ -1.34
CCDC33-209ENST00000560565 GAGE13Q4V321 117 aa6.7□□□□□ -1.34
CCDC33-209ENST00000560565 HCP5Q6MZN7 132 aa6.7□□□□□ -1.34
CCDC33-209ENST00000560565 PRIMA1Q86XR5 153 aa6.7□□□□□ -1.34
CCDC33-209ENST00000560565 Q8N8P6 123 aa6.7□□□□□ -1.34
CCDC33-209ENST00000560565 ZNF479Q96JC4 524 aa6.7□□□□□ -1.34
CCDC33-209ENST00000560565 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.7□□□□□ -1.34
CCDC33-209ENST00000560565 ANK3Q12955 4377 aaKnown RBP6.69□□□□□ -1.34
CCDC33-209ENST00000560565 RYR3Q15413 4870 aa6.69□□□□□ -1.34
CCDC33-209ENST00000560565 A0A1W2PRD5 423 aa6.69□□□□□ -1.34
CCDC33-209ENST00000560565 A0A1W2PRF3 423 aa6.69□□□□□ -1.34
CCDC33-209ENST00000560565 A0A1W2PRM7 423 aa6.69□□□□□ -1.34
CCDC33-209ENST00000560565 WI2-2373I1.2A0A1W2PRP0 233 aa6.69□□□□□ -1.34
CCDC33-209ENST00000560565 ZNF785A8K8V0 405 aa6.69□□□□□ -1.34
CCDC33-209ENST00000560565 TMEM262E9PQX1 116 aa6.69□□□□□ -1.34
CCDC33-209ENST00000560565 GNG7O60262 68 aa6.69□□□□□ -1.34
CCDC33-209ENST00000560565 SH2D1AO60880 128 aa6.69□□□□□ -1.34
CCDC33-209ENST00000560565 LY6HO94772 140 aa6.69□□□□□ -1.34
CCDC33-209ENST00000560565 ZNF138P52744 262 aa6.69□□□□□ -1.34
CCDC33-209ENST00000560565 SSBP2P81877 361 aaPredicted RBP6.69□□□□□ -1.34
CCDC33-209ENST00000560565 PAX8Q06710 450 aa6.69□□□□□ -1.34
CCDC33-209ENST00000560565 SCGB2A2Q13296 93 aa6.69□□□□□ -1.34
CCDC33-209ENST00000560565 ORMDL2Q53FV1 153 aa6.69□□□□□ -1.34
CCDC33-209ENST00000560565 AMN1Q8IY45 258 aa6.69□□□□□ -1.34
CCDC33-209ENST00000560565 MAPK1IP1LQ8NDC0 245 aa6.69□□□□□ -1.34
CCDC33-209ENST00000560565 OR11H6Q8NGC7 330 aa6.69□□□□□ -1.34
CCDC33-209ENST00000560565 RPEQ96AT9 228 aa6.69□□□□□ -1.34
CCDC33-209ENST00000560565 MRPL53Q96EL3 112 aaKnown RBP6.69□□□□□ -1.34
CCDC33-209ENST00000560565 MRAP2Q96G30 205 aa6.69□□□□□ -1.34
CCDC33-209ENST00000560565 RITA1Q96K30 269 aa6.69□□□□□ -1.34
CCDC33-209ENST00000560565 SLC50A1Q9BRV3 221 aa6.69□□□□□ -1.34
CCDC33-209ENST00000560565 TRBV20-1A0A075B6N2 111 aa6.68□□□□□ -1.34
CCDC33-209ENST00000560565 IGHV4-30-2A0A087WSY4 118 aa6.68□□□□□ -1.34
CCDC33-209ENST00000560565 LOC389332A0A1B0GUA5 103 aa6.68□□□□□ -1.34
CCDC33-209ENST00000560565 NPIPB5A8MRT5 1133 aa6.68□□□□□ -1.34
CCDC33-209ENST00000560565 TEX22C9J3V5 150 aa6.68□□□□□ -1.34
CCDC33-209ENST00000560565 CNIH1O95406 144 aa6.68□□□□□ -1.34
CCDC33-209ENST00000560565 IL4P05112 153 aa6.68□□□□□ -1.34
CCDC33-209ENST00000560565 IGLC6P0CF74 106 aa6.68□□□□□ -1.34
CCDC33-209ENST00000560565 LEPP41159 167 aa6.68□□□□□ -1.34
CCDC33-209ENST00000560565 ODF1Q14990 250 aa6.68□□□□□ -1.34
CCDC33-209ENST00000560565 CCDC144NLQ6NUI1 221 aa6.68□□□□□ -1.34
CCDC33-209ENST00000560565 LHFPL4Q7Z7J7 247 aa6.68□□□□□ -1.34
CCDC33-209ENST00000560565 EXOC3-AS1Q8N2X6 119 aa6.68□□□□□ -1.34
CCDC33-209ENST00000560565 C10orf105Q8TEF2 133 aa6.68□□□□□ -1.34
CCDC33-209ENST00000560565 RAB37Q96AX2 223 aa6.68□□□□□ -1.34
CCDC33-209ENST00000560565 SGK494Q96LW2 274 aa6.68□□□□□ -1.34
CCDC33-209ENST00000560565 JMJD8Q96S16 334 aa6.68□□□□□ -1.34
CCDC33-209ENST00000560565 MRPL16Q9NX20 251 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms