RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 C11orf72Q8NBR9 251 aa9.82□□□□□ -0.84
TPM1-223ENST00000560445 ASB13Q8WXK3 278 aa9.82□□□□□ -0.84
TPM1-223ENST00000560445 PHYHIPLQ96FC7 376 aa9.82□□□□□ -0.84
TPM1-223ENST00000560445 Q9H3A6 140 aa9.82□□□□□ -0.84
TPM1-223ENST00000560445 Q9H8V8 135 aa9.82□□□□□ -0.84
TPM1-223ENST00000560445 OTORQ9NRC9 128 aa9.82□□□□□ -0.84
TPM1-223ENST00000560445 MRPS16Q9Y3D3 137 aaKnown RBP9.82□□□□□ -0.84
TPM1-223ENST00000560445 TRGV11A0A075B6L2 103 aa9.81□□□□□ -0.84
TPM1-223ENST00000560445 A0A0J9YY99 117 aa9.81□□□□□ -0.84
TPM1-223ENST00000560445 SPINK4O60575 86 aa9.81□□□□□ -0.84
TPM1-223ENST00000560445 ST6GAL2Q96JF0 529 aa9.81□□□□□ -0.84
TPM1-223ENST00000560445 VGLL1Q99990 258 aa9.81□□□□□ -0.84
TPM1-223ENST00000560445 ICOSQ9Y6W8 199 aa9.81□□□□□ -0.84
TPM1-223ENST00000560445 SERTM2A0A1B0GWG4 89 aa9.8□□□□□ -0.84
TPM1-223ENST00000560445 MBP02144 154 aa9.8□□□□□ -0.84
TPM1-223ENST00000560445 HOXA5P20719 270 aa9.8□□□□□ -0.84
TPM1-223ENST00000560445 FAM159AQ6UWV7 190 aa9.8□□□□□ -0.84
TPM1-223ENST00000560445 SPXQ9BT56 116 aa9.8□□□□□ -0.84
TPM1-223ENST00000560445 NDFIP1Q9BT67 221 aa9.8□□□□□ -0.84
TPM1-223ENST00000560445 PRO0255Q9UI72 69 aa9.8□□□□□ -0.84
TPM1-223ENST00000560445 KLF12Q9Y4X4 402 aa9.8□□□□□ -0.84
TPM1-223ENST00000560445 K7EQM0 130 aa9.79□□□□□ -0.84
TPM1-223ENST00000560445 PAX4O43316 350 aa9.79□□□□□ -0.84
TPM1-223ENST00000560445 DIRC3C9JPN6 131 aa9.78□□□□□ -0.84
TPM1-223ENST00000560445 Q6AWC8 147 aa9.78□□□□□ -0.84
TPM1-223ENST00000560445 INO80EQ8NBZ0 244 aaPredicted RBP9.78□□□□□ -0.84
TPM1-223ENST00000560445 OR10G4Q8NGN3 311 aa9.78□□□□□ -0.84
TPM1-223ENST00000560445 OR10G9Q8NGN4 311 aa9.78□□□□□ -0.84
TPM1-223ENST00000560445 OR10G7Q8NGN6 311 aa9.78□□□□□ -0.84
TPM1-223ENST00000560445 Q8TAT8 98 aa9.78□□□□□ -0.84
TPM1-223ENST00000560445 PCNPQ8WW12 178 aaKnown RBP9.78□□□□□ -0.84
TPM1-223ENST00000560445 MUC4Q99102 2169 aa9.78□□□□□ -0.84
TPM1-223ENST00000560445 MRPL23Q16540 153 aaKnown RBP9.77□□□□□ -0.85
TPM1-223ENST00000560445 OR2G3Q8NGZ4 309 aa9.77□□□□□ -0.85
TPM1-223ENST00000560445 KCNS1Q96KK3 526 aa9.77□□□□□ -0.85
TPM1-223ENST00000560445 HYLS1Q96M11 299 aa9.77□□□□□ -0.85
TPM1-223ENST00000560445 WFDC1Q9HC57 220 aa9.77□□□□□ -0.85
TPM1-223ENST00000560445 TRAV21A0A0B4J279 112 aa9.76□□□□□ -0.85
TPM1-223ENST00000560445 TRGV4A0A0C4DH28 118 aa9.76□□□□□ -0.85
TPM1-223ENST00000560445 PGPA6NDG6 321 aa9.76□□□□□ -0.85
TPM1-223ENST00000560445 FBLL1A6NHQ2 334 aaKnown RBP9.76□□□□□ -0.85
TPM1-223ENST00000560445 K7EP13 123 aa9.76□□□□□ -0.85
TPM1-223ENST00000560445 ORM1P02763 201 aa9.76□□□□□ -0.85
TPM1-223ENST00000560445 GIPP09681 153 aaPredicted RBP9.76□□□□□ -0.85
TPM1-223ENST00000560445 CDC34P49427 236 aaPredicted RBP9.76□□□□□ -0.85
TPM1-223ENST00000560445 SERF2P84101 59 aa9.76□□□□□ -0.85
TPM1-223ENST00000560445 ESRGQ1W209 222 aa9.76□□□□□ -0.85
TPM1-223ENST00000560445 SH2D6Q7Z4S9 175 aa9.76□□□□□ -0.85
TPM1-223ENST00000560445 AQP10Q96PS8 301 aa9.76□□□□□ -0.85
TPM1-223ENST00000560445 PSMG3Q9BT73 122 aaPredicted RBP9.76□□□□□ -0.85
TPM1-223ENST00000560445 MRPL16Q9NX20 251 aaKnown RBP9.76□□□□□ -0.85
TPM1-223ENST00000560445 HHLA3Q9XRX5 114 aa9.76□□□□□ -0.85
TPM1-223ENST00000560445 TRAV9-2A0A087WT02 112 aa9.75□□□□□ -0.85
TPM1-223ENST00000560445 A0A096LPF7 62 aa9.75□□□□□ -0.85
TPM1-223ENST00000560445 C16orf90A8MZG2 172 aa9.75□□□□□ -0.85
TPM1-223ENST00000560445 SIVA1O15304 175 aa9.75□□□□□ -0.85
TPM1-223ENST00000560445 RGS21Q2M5E4 152 aa9.75□□□□□ -0.85
TPM1-223ENST00000560445 TDRG1Q3Y452 100 aa9.75□□□□□ -0.85
TPM1-223ENST00000560445 ZFP69Q49AA0 526 aa9.75□□□□□ -0.85
TPM1-223ENST00000560445 PRR9Q5T870 116 aa9.75□□□□□ -0.85
TPM1-223ENST00000560445 HSD17B11Q8NBQ5 300 aa9.75□□□□□ -0.85
TPM1-223ENST00000560445 VSIG2Q96IQ7 327 aa9.75□□□□□ -0.85
TPM1-223ENST00000560445 TMEM167BQ9NRX6 74 aa9.75□□□□□ -0.85
TPM1-223ENST00000560445 TP53TG3Q9ULZ0 132 aa9.75□□□□□ -0.85
TPM1-223ENST00000560445 RPH3ALQ9UNE2 315 aa9.75□□□□□ -0.85
TPM1-223ENST00000560445 HERC2O95714 4834 aa9.75□□□□□ -0.85
TPM1-223ENST00000560445 BORCS7-ASMTA0A0B4J1R7 106 aa9.74□□□□□ -0.85
TPM1-223ENST00000560445 SRIP30626 198 aa9.74□□□□□ -0.85
TPM1-223ENST00000560445 RAB2AP61019 212 aa9.74□□□□□ -0.85
TPM1-223ENST00000560445 TMEM183BQ1AE95 376 aa9.74□□□□□ -0.85
TPM1-223ENST00000560445 MUC21Q5SSG8 566 aa9.74□□□□□ -0.85
TPM1-223ENST00000560445 GOLT1AQ6ZVE7 132 aa9.74□□□□□ -0.85
TPM1-223ENST00000560445 NEGR1Q7Z3B1 354 aa9.74□□□□□ -0.85
TPM1-223ENST00000560445 IQCF2Q8IXL9 164 aa9.74□□□□□ -0.85
TPM1-223ENST00000560445 TMEM183AQ8IXX5 376 aa9.74□□□□□ -0.85
TPM1-223ENST00000560445 C5orf17Q8NAS9 161 aa9.74□□□□□ -0.85
TPM1-223ENST00000560445 RASL10AQ92737 203 aa9.74□□□□□ -0.85
TPM1-223ENST00000560445 TXNDC17Q9BRA2 123 aa9.74□□□□□ -0.85
TPM1-223ENST00000560445 SDF2L1Q9HCN8 221 aa9.74□□□□□ -0.85
TPM1-223ENST00000560445 TREM1Q9NP99 234 aa9.74□□□□□ -0.85
TPM1-223ENST00000560445 NAGKQ9UJ70 344 aa9.74□□□□□ -0.85
TPM1-223ENST00000560445 C9JCJ5 164 aa9.73□□□□□ -0.85
TPM1-223ENST00000560445 M0R2P5 195 aa9.73□□□□□ -0.85
TPM1-223ENST00000560445 EREGO14944 169 aa9.73□□□□□ -0.85
TPM1-223ENST00000560445 CIDEAO60543 219 aa9.73□□□□□ -0.85
TPM1-223ENST00000560445 IGHV3-53P01767 116 aa9.73□□□□□ -0.85
TPM1-223ENST00000560445 CRYBA4P53673 196 aa9.73□□□□□ -0.85
TPM1-223ENST00000560445 TNP2Q05952 138 aa9.73□□□□□ -0.85
TPM1-223ENST00000560445 NFE4Q86UQ8 179 aa9.73□□□□□ -0.85
TPM1-223ENST00000560445 FXYD6-FXYD2A0A087WZ82 144 aa9.72□□□□□ -0.85
TPM1-223ENST00000560445 TRAV4A0A0B4J268 109 aa9.72□□□□□ -0.85
TPM1-223ENST00000560445 CXorf1O96002 111 aa9.72□□□□□ -0.85
TPM1-223ENST00000560445 ARL14EPLP0DKL9 152 aa9.72□□□□□ -0.85
TPM1-223ENST00000560445 ATP6V0CP27449 155 aa9.72□□□□□ -0.85
TPM1-223ENST00000560445 ACTR3CQ9C0K3 210 aaPredicted RBP9.72□□□□□ -0.85
TPM1-223ENST00000560445 TNFSF18Q9UNG2 199 aa9.72□□□□□ -0.85
TPM1-223ENST00000560445 FAT2Q9NYQ8 4349 aa9.72□□□□□ -0.85
TPM1-223ENST00000560445 PKHD1P08F94 4074 aa9.72□□□□□ -0.85
TPM1-223ENST00000560445 HMGB3O15347 200 aaKnown RBP9.71□□□□□ -0.86
TPM1-223ENST00000560445 CDK2AP2O75956 126 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms