RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 RBMY1A1P0DJD3 496 aaKnown RBP3.83□□□□□ -1.8
SPG11-220ENST00000559933 RBMY1CP0DJD4 496 aa3.83□□□□□ -1.8
SPG11-220ENST00000559933 ID1P41134 155 aa3.83□□□□□ -1.8
SPG11-220ENST00000559933 INSL3P51460 131 aa3.83□□□□□ -1.8
SPG11-220ENST00000559933 BTN1A1Q13410 526 aa3.83□□□□□ -1.8
SPG11-220ENST00000559933 PEA15Q15121 130 aa3.83□□□□□ -1.8
SPG11-220ENST00000559933 RBMY1FQ15415 496 aaKnown RBP3.83□□□□□ -1.8
SPG11-220ENST00000559933 SPINK13Q1W4C9 94 aa3.83□□□□□ -1.8
SPG11-220ENST00000559933 LYPD1Q8N2G4 141 aa3.83□□□□□ -1.8
SPG11-220ENST00000559933 SAV1Q9H4B6 383 aaPredicted RBP3.83□□□□□ -1.8
SPG11-220ENST00000559933 SRD5A3Q9H8P0 318 aa3.83□□□□□ -1.8
SPG11-220ENST00000559933 CLEC5AQ9NY25 188 aa3.83□□□□□ -1.8
SPG11-220ENST00000559933 PSG8Q9UQ74 426 aa3.83□□□□□ -1.8
SPG11-220ENST00000559933 RNF24Q9Y225 148 aa3.83□□□□□ -1.8
SPG11-220ENST00000559933 ARL2-SNX15V9GYD0 113 aa3.83□□□□□ -1.8
SPG11-220ENST00000559933 TMEM218A2RU14 115 aa3.82□□□□□ -1.8
SPG11-220ENST00000559933 H3BMM0 161 aa3.82□□□□□ -1.8
SPG11-220ENST00000559933 K7EIL1 84 aa3.82□□□□□ -1.8
SPG11-220ENST00000559933 PDE6DO43924 150 aa3.82□□□□□ -1.8
SPG11-220ENST00000559933 IGLV2-8P01709 118 aa3.82□□□□□ -1.8
SPG11-220ENST00000559933 IGHV4-30-4P0DP06 118 aa3.82□□□□□ -1.8
SPG11-220ENST00000559933 MGST1P10620 155 aaKnown RBP3.82□□□□□ -1.8
SPG11-220ENST00000559933 HLA-DRB4P13762 266 aa3.82□□□□□ -1.8
SPG11-220ENST00000559933 CSN1S1P47710 185 aa3.82□□□□□ -1.8
SPG11-220ENST00000559933 ZNF80P51504 273 aaPredicted RBP3.82□□□□□ -1.8
SPG11-220ENST00000559933 FLI1Q01543 452 aaPredicted RBP3.82□□□□□ -1.8
SPG11-220ENST00000559933 EGFEM1PQ0D2K5 195 aa3.82□□□□□ -1.8
SPG11-220ENST00000559933 OR5I1Q13606 314 aa3.82□□□□□ -1.8
SPG11-220ENST00000559933 PMS2P11Q13670 270 aa3.82□□□□□ -1.8
SPG11-220ENST00000559933 PRR27Q6MZM9 219 aa3.82□□□□□ -1.8
SPG11-220ENST00000559933 EBLN2Q6P2I7 272 aa3.82□□□□□ -1.8
SPG11-220ENST00000559933 AMTNQ6UX39 209 aa3.82□□□□□ -1.8
SPG11-220ENST00000559933 LINC00322Q6ZN03 302 aaPredicted RBP3.82□□□□□ -1.8
SPG11-220ENST00000559933 FOXI2Q6ZQN5 318 aa3.82□□□□□ -1.8
SPG11-220ENST00000559933 TRPT1Q86TN4 253 aaKnown RBP3.82□□□□□ -1.8
SPG11-220ENST00000559933 GTSCR1Q86UQ5 136 aa3.82□□□□□ -1.8
SPG11-220ENST00000559933 TMEM75Q8N9X5 138 aa3.82□□□□□ -1.8
SPG11-220ENST00000559933 OR10J6PQ8NGY7 276 aa3.82□□□□□ -1.8
SPG11-220ENST00000559933 MRPL53Q96EL3 112 aaKnown RBP3.82□□□□□ -1.8
SPG11-220ENST00000559933 ZC2HC1AQ96GY0 325 aa3.82□□□□□ -1.8
SPG11-220ENST00000559933 FMC1Q96HJ9 113 aa3.82□□□□□ -1.8
SPG11-220ENST00000559933 SMIM7Q9BQ49 75 aa3.82□□□□□ -1.8
SPG11-220ENST00000559933 RETNQ9HD89 108 aa3.82□□□□□ -1.8
SPG11-220ENST00000559933 HLA-DRB4X5D2U9 266 aa3.82□□□□□ -1.8
SPG11-220ENST00000559933 ZNF727A8MUV8 499 aa3.81□□□□□ -1.8
SPG11-220ENST00000559933 F8W036 122 aa3.81□□□□□ -1.8
SPG11-220ENST00000559933 TMEM250H0YL14 139 aa3.81□□□□□ -1.8
SPG11-220ENST00000559933 SPRY2O43597 315 aa3.81□□□□□ -1.8
SPG11-220ENST00000559933 ATP6V1G1O75348 118 aa3.81□□□□□ -1.8
SPG11-220ENST00000559933 LTAP01374 205 aa3.81□□□□□ -1.8
SPG11-220ENST00000559933 GIG44P09565 113 aaPredicted RBP3.81□□□□□ -1.8
SPG11-220ENST00000559933 RNASE4P34096 147 aaKnown RBP3.81□□□□□ -1.8
SPG11-220ENST00000559933 CRIP1P50238 77 aa3.81□□□□□ -1.8
SPG11-220ENST00000559933 ZNF138P52744 262 aa3.81□□□□□ -1.8
SPG11-220ENST00000559933 UBE2G1P62253 170 aa3.81□□□□□ -1.8
SPG11-220ENST00000559933 RPL19P84098 196 aaKnown RBP3.81□□□□□ -1.8
SPG11-220ENST00000559933 TMEM183BQ1AE95 376 aa3.81□□□□□ -1.8
SPG11-220ENST00000559933 SOHLH1Q5JUK2 328 aa3.81□□□□□ -1.8
SPG11-220ENST00000559933 TMEM78Q5T7P6 136 aa3.81□□□□□ -1.8
SPG11-220ENST00000559933 GFI1BQ5VTD9 330 aa3.81□□□□□ -1.8
SPG11-220ENST00000559933 UQCC3Q6UW78 93 aa3.81□□□□□ -1.8
SPG11-220ENST00000559933 BAGE2Q86Y30 109 aa3.81□□□□□ -1.8
SPG11-220ENST00000559933 STHQ8IWL8 128 aa3.81□□□□□ -1.8
SPG11-220ENST00000559933 EIF4E3Q8N5X7 224 aaKnown RBP3.81□□□□□ -1.8
SPG11-220ENST00000559933 ZFAND2AQ8N6M9 145 aa3.81□□□□□ -1.8
SPG11-220ENST00000559933 HIST1H2BAQ96A08 127 aa3.81□□□□□ -1.8
SPG11-220ENST00000559933 FAM19A4Q96LR4 140 aa3.81□□□□□ -1.8
SPG11-220ENST00000559933 RNASE7Q9H1E1 156 aaKnown RBP3.81□□□□□ -1.8
SPG11-220ENST00000559933 ZNF492Q9P255 531 aa3.81□□□□□ -1.8
SPG11-220ENST00000559933 PRELID1Q9Y255 219 aa3.81□□□□□ -1.8
SPG11-220ENST00000559933 KLF12Q9Y4X4 402 aa3.81□□□□□ -1.8
SPG11-220ENST00000559933 MEGF8Q7Z7M0 2845 aa3.8□□□□□ -1.8
SPG11-220ENST00000559933 HUWE1Q7Z6Z7 4374 aaKnown RBP3.8□□□□□ -1.8
SPG11-220ENST00000559933 IGHV3OR16-12A0A075B7B8 117 aa3.8□□□□□ -1.8
SPG11-220ENST00000559933 TMSB15BA0A087X1C1 80 aa3.8□□□□□ -1.8
SPG11-220ENST00000559933 TRAV12-3A0A0B4J271 114 aa3.8□□□□□ -1.8
SPG11-220ENST00000559933 RBAKDNA6NC62 111 aa3.8□□□□□ -1.8
SPG11-220ENST00000559933 A8MTW9 85 aa3.8□□□□□ -1.8
SPG11-220ENST00000559933 M0R036 132 aa3.8□□□□□ -1.8
SPG11-220ENST00000559933 CRXO43186 299 aaPredicted RBP3.8□□□□□ -1.8
SPG11-220ENST00000559933 SH2D1AO60880 128 aa3.8□□□□□ -1.8
SPG11-220ENST00000559933 SCO1O75880 301 aa3.8□□□□□ -1.8
SPG11-220ENST00000559933 CA1P00915 261 aaPredicted RBP3.8□□□□□ -1.8
SPG11-220ENST00000559933 GCGP01275 180 aa3.8□□□□□ -1.8
SPG11-220ENST00000559933 GZMBP10144 247 aa3.8□□□□□ -1.8
SPG11-220ENST00000559933 TAGLN2P37802 199 aaKnown RBP3.8□□□□□ -1.8
SPG11-220ENST00000559933 GNG4P50150 75 aa3.8□□□□□ -1.8
SPG11-220ENST00000559933 RPL23P62829 140 aaKnown RBP3.8□□□□□ -1.8
SPG11-220ENST00000559933 ADIRFQ15847 76 aa3.8□□□□□ -1.8
SPG11-220ENST00000559933 MUC21Q5SSG8 566 aa3.8□□□□□ -1.8
SPG11-220ENST00000559933 KPRPQ5T749 579 aaPredicted RBP3.8□□□□□ -1.8
SPG11-220ENST00000559933 SAMD13Q5VXD3 122 aa3.8□□□□□ -1.8
SPG11-220ENST00000559933 ATRAIDQ6UW56 229 aa3.8□□□□□ -1.8
SPG11-220ENST00000559933 C9orf47Q6ZRZ4 202 aa3.8□□□□□ -1.8
SPG11-220ENST00000559933 LINC01551Q86U37 167 aa3.8□□□□□ -1.8
SPG11-220ENST00000559933 OCC1Q8TAD7 63 aa3.8□□□□□ -1.8
SPG11-220ENST00000559933 LINC00476Q8WZB0 136 aa3.8□□□□□ -1.8
SPG11-220ENST00000559933 NKX6-2Q9C056 277 aaPredicted RBP3.8□□□□□ -1.8
SPG11-220ENST00000559933 PPP1R14DQ9NXH3 145 aa3.8□□□□□ -1.8
SPG11-220ENST00000559933 XCL2Q9UBD3 114 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms