RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 MED9Q9NWA0 146 aa1.32□□□□□ -2.2
CTDSPL2-207ENST00000559738 SNURFQ9Y675 71 aa1.32□□□□□ -2.2
CTDSPL2-207ENST00000559738 HLA-DRB4X5D2U9 266 aa1.32□□□□□ -2.2
CTDSPL2-207ENST00000559738 MYH7P12883 1935 aa1.32□□□□□ -2.2
CTDSPL2-207ENST00000559738 PTPRDP23468 1912 aa1.32□□□□□ -2.2
CTDSPL2-207ENST00000559738 MCM3APO60318 1980 aa1.32□□□□□ -2.2
CTDSPL2-207ENST00000559738 CASP8AP2Q9UKL3 1982 aa1.32□□□□□ -2.2
CTDSPL2-207ENST00000559738 CECR2Q9BXF3 1484 aa1.31□□□□□ -2.2
CTDSPL2-207ENST00000559738 MUC4Q99102 2169 aa1.31□□□□□ -2.2
CTDSPL2-207ENST00000559738 PEG3Q9GZU2 1588 aa1.31□□□□□ -2.2
CTDSPL2-207ENST00000559738 ZNF727A8MUV8 499 aa1.31□□□□□ -2.2
CTDSPL2-207ENST00000559738 CD3DP04234 171 aa1.31□□□□□ -2.2
CTDSPL2-207ENST00000559738 LINC00694P0DN24 101 aa1.31□□□□□ -2.2
CTDSPL2-207ENST00000559738 CCL4P13236 92 aa1.31□□□□□ -2.2
CTDSPL2-207ENST00000559738 NCS1P62166 190 aa1.31□□□□□ -2.2
CTDSPL2-207ENST00000559738 MPV17LQ2QL34 196 aa1.31□□□□□ -2.2
CTDSPL2-207ENST00000559738 CLLU1Q5K131 121 aa1.31□□□□□ -2.2
CTDSPL2-207ENST00000559738 KRTAP26-1Q6PEX3 210 aa1.31□□□□□ -2.2
CTDSPL2-207ENST00000559738 TMEM91Q6ZNR0 172 aa1.31□□□□□ -2.2
CTDSPL2-207ENST00000559738 CIB3Q96Q77 187 aaPredicted RBP1.31□□□□□ -2.2
CTDSPL2-207ENST00000559738 METTL1Q9UBP6 276 aaKnown RBP1.31□□□□□ -2.2
CTDSPL2-207ENST00000559738 PAIP2BQ9ULR5 123 aaKnown RBP1.31□□□□□ -2.2
CTDSPL2-207ENST00000559738 RFX7Q2KHR2 1363 aa1.31□□□□□ -2.2
CTDSPL2-207ENST00000559738 UNC13CQ8NB66 2214 aa1.31□□□□□ -2.2
CTDSPL2-207ENST00000559738 DISP2A7MBM2 1401 aa1.31□□□□□ -2.2
CTDSPL2-207ENST00000559738 ARHGAP31Q2M1Z3 1444 aa1.31□□□□□ -2.2
CTDSPL2-207ENST00000559738 FGD6Q6ZV73 1430 aa1.31□□□□□ -2.2
CTDSPL2-207ENST00000559738 PHLPP1O60346 1717 aa1.3□□□□□ -2.2
CTDSPL2-207ENST00000559738 KIDINS220Q9ULH0 1771 aa1.3□□□□□ -2.2
CTDSPL2-207ENST00000559738 IGHV1-24A0A0C4DH33 117 aa1.3□□□□□ -2.2
CTDSPL2-207ENST00000559738 IGKV3D-7A0A0C4DH55 119 aa1.3□□□□□ -2.2
CTDSPL2-207ENST00000559738 IGKV3OR2-268A0A0C4DH90 116 aa1.3□□□□□ -2.2
CTDSPL2-207ENST00000559738 PNMA8CA0A1B0GUJ8 204 aa1.3□□□□□ -2.2
CTDSPL2-207ENST00000559738 FAM236AA0A1B0GUQ0 79 aa1.3□□□□□ -2.2
CTDSPL2-207ENST00000559738 FAM236BA0A1B0GV22 79 aa1.3□□□□□ -2.2
CTDSPL2-207ENST00000559738 M0R129 80 aa1.3□□□□□ -2.2
CTDSPL2-207ENST00000559738 SPRNQ5BIV9 151 aa1.3□□□□□ -2.2
CTDSPL2-207ENST00000559738 C10orf111Q8N326 155 aa1.3□□□□□ -2.2
CTDSPL2-207ENST00000559738 OR10AG1Q8NH19 301 aa1.3□□□□□ -2.2
CTDSPL2-207ENST00000559738 SMIM7Q9BQ49 75 aa1.3□□□□□ -2.2
CTDSPL2-207ENST00000559738 EML5Q05BV3 1969 aa1.3□□□□□ -2.2
CTDSPL2-207ENST00000559738 PRG4Q92954 1404 aaPredicted RBP1.3□□□□□ -2.2
CTDSPL2-207ENST00000559738 KIF13AQ9H1H9 1805 aa1.29□□□□□ -2.2
CTDSPL2-207ENST00000559738 TRBV6-7A0A0A0MS04 114 aa1.29□□□□□ -2.2
CTDSPL2-207ENST00000559738 BBIP1A8MTZ0 92 aa1.29□□□□□ -2.2
CTDSPL2-207ENST00000559738 RBP4P02753 201 aa1.29□□□□□ -2.2
CTDSPL2-207ENST00000559738 ZNF25P17030 456 aaPredicted RBP1.29□□□□□ -2.2
CTDSPL2-207ENST00000559738 COPZ1P61923 177 aa1.29□□□□□ -2.2
CTDSPL2-207ENST00000559738 RPS25P62851 125 aaKnown RBP1.29□□□□□ -2.2
CTDSPL2-207ENST00000559738 C5orf17Q8NAS9 161 aa1.29□□□□□ -2.2
CTDSPL2-207ENST00000559738 ERG28Q9UKR5 140 aa1.29□□□□□ -2.2
CTDSPL2-207ENST00000559738 DNAJC15Q9Y5T4 150 aa1.29□□□□□ -2.2
CTDSPL2-207ENST00000559738 MPC1Q9Y5U8 109 aa1.29□□□□□ -2.2
CTDSPL2-207ENST00000559738 SDK1Q7Z5N4 2213 aa1.29□□□□□ -2.2
CTDSPL2-207ENST00000559738 ERCC6Q03468 1493 aa1.29□□□□□ -2.2
CTDSPL2-207ENST00000559738 SPEF2Q9C093 1822 aa1.29□□□□□ -2.2
CTDSPL2-207ENST00000559738 IGKV3-7A0A075B6H7 116 aa1.28□□□□□ -2.2
CTDSPL2-207ENST00000559738 IGKV2-40A0A087WW87 121 aaPredicted RBP1.28□□□□□ -2.2
CTDSPL2-207ENST00000559738 IFITM5A6NNB3 132 aa1.28□□□□□ -2.2
CTDSPL2-207ENST00000559738 CDC42EP2O14613 210 aa1.28□□□□□ -2.2
CTDSPL2-207ENST00000559738 NPFFO15130 113 aa1.28□□□□□ -2.2
CTDSPL2-207ENST00000559738 CCL25O15444 150 aa1.28□□□□□ -2.2
CTDSPL2-207ENST00000559738 KLF7O75840 302 aaPredicted RBP1.28□□□□□ -2.2
CTDSPL2-207ENST00000559738 PPYP01298 95 aa1.28□□□□□ -2.2
CTDSPL2-207ENST00000559738 IGKV2D-40P01614 121 aaPredicted RBP1.28□□□□□ -2.2
CTDSPL2-207ENST00000559738 TSPAN19P0C672 248 aa1.28□□□□□ -2.2
CTDSPL2-207ENST00000559738 UNQ6190/PRO20217Q6UXQ8 127 aa1.28□□□□□ -2.2
CTDSPL2-207ENST00000559738 LIMD2Q9BT23 127 aa1.28□□□□□ -2.2
CTDSPL2-207ENST00000559738 TMEM14CQ9P0S9 112 aa1.28□□□□□ -2.2
CTDSPL2-207ENST00000559738 LSM2Q9Y333 95 aaKnown RBP1.28□□□□□ -2.2
CTDSPL2-207ENST00000559738 WDR97A6NE52 1622 aa1.28□□□□□ -2.2
CTDSPL2-207ENST00000559738 MYO18AQ92614 2054 aaKnown RBP1.28□□□□□ -2.2
CTDSPL2-207ENST00000559738 SORL1Q92673 2214 aa1.28□□□□□ -2.2
CTDSPL2-207ENST00000559738 MYH9P35579 1960 aaKnown RBP1.27□□□□□ -2.21
CTDSPL2-207ENST00000559738 FOCADQ5VW36 1801 aa1.27□□□□□ -2.21
CTDSPL2-207ENST00000559738 ERBINQ96RT1 1412 aa1.27□□□□□ -2.21
CTDSPL2-207ENST00000559738 IGKV2-29A2NJV5 120 aaPredicted RBP1.27□□□□□ -2.21
CTDSPL2-207ENST00000559738 EFCAB10A6NFE3 127 aa1.27□□□□□ -2.21
CTDSPL2-207ENST00000559738 ZNF670-ZNF695F2Z2N8 137 aa1.27□□□□□ -2.21
CTDSPL2-207ENST00000559738 GEMIN2O14893 280 aaKnown RBP1.27□□□□□ -2.21
CTDSPL2-207ENST00000559738 NUPR1O60356 82 aa1.27□□□□□ -2.21
CTDSPL2-207ENST00000559738 SULT1C4O75897 302 aa1.27□□□□□ -2.21
CTDSPL2-207ENST00000559738 DNAJB13P59910 316 aa1.27□□□□□ -2.21
CTDSPL2-207ENST00000559738 PLGLB1Q02325 96 aa1.27□□□□□ -2.21
CTDSPL2-207ENST00000559738 C3orf62Q6ZUJ4 267 aa1.27□□□□□ -2.21
CTDSPL2-207ENST00000559738 SNX29P2Q8IUI4 249 aa1.27□□□□□ -2.21
CTDSPL2-207ENST00000559738 OR10AC1Q8NH08 325 aa1.27□□□□□ -2.21
CTDSPL2-207ENST00000559738 ZFP30Q9Y2G7 519 aa1.27□□□□□ -2.21
CTDSPL2-207ENST00000559738 TENM1Q9UKZ4 2725 aa1.27□□□□□ -2.21
CTDSPL2-207ENST00000559738 NINQ8N4C6 2090 aa1.27□□□□□ -2.21
CTDSPL2-207ENST00000559738 PHRF1Q9P1Y6 1649 aaKnown RBP1.26□□□□□ -2.21
CTDSPL2-207ENST00000559738 LOC110117498A0A087WWA1 95 aa1.26□□□□□ -2.21
CTDSPL2-207ENST00000559738 A6NN06 94 aa1.26□□□□□ -2.21
CTDSPL2-207ENST00000559738 FAM25AB3EWG3 89 aa1.26□□□□□ -2.21
CTDSPL2-207ENST00000559738 FAM25CB3EWG5 89 aa1.26□□□□□ -2.21
CTDSPL2-207ENST00000559738 FAM25GB3EWG6 89 aa1.26□□□□□ -2.21
CTDSPL2-207ENST00000559738 JMJD7-PLA2G4BH0Y9G9 81 aa1.26□□□□□ -2.21
CTDSPL2-207ENST00000559738 K7EP13 123 aa1.26□□□□□ -2.21
CTDSPL2-207ENST00000559738 INE1O15225 51 aa1.26□□□□□ -2.21
CTDSPL2-207ENST00000559738 YPEL1O60688 119 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms