RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 TSSC4Q9Y5U2 329 aaPredicted RBP5.89□□□□□ -1.47
LRRC28-211ENST00000558890 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.88□□□□□ -1.47
LRRC28-211ENST00000558890 ZNF785A8K8V0 405 aa5.88□□□□□ -1.47
LRRC28-211ENST00000558890 ADARB2-AS1A8MUL3 147 aa5.88□□□□□ -1.47
LRRC28-211ENST00000558890 TRGV3P03979 118 aa5.88□□□□□ -1.47
LRRC28-211ENST00000558890 LGALS1P09382 135 aaKnown RBP5.88□□□□□ -1.47
LRRC28-211ENST00000558890 RAB4AP20338 218 aa5.88□□□□□ -1.47
LRRC28-211ENST00000558890 RPS20P60866 119 aaKnown RBP5.88□□□□□ -1.47
LRRC28-211ENST00000558890 RELQ04864 619 aaPredicted RBP5.88□□□□□ -1.47
LRRC28-211ENST00000558890 TMEM95Q3KNT9 176 aa5.88□□□□□ -1.47
LRRC28-211ENST00000558890 TCTEX1D4Q5JR98 221 aa5.88□□□□□ -1.47
LRRC28-211ENST00000558890 C1orf194Q5T5A4 169 aa5.88□□□□□ -1.47
LRRC28-211ENST00000558890 GDF5OSQ5U4N7 250 aa5.88□□□□□ -1.47
LRRC28-211ENST00000558890 RNASEKQ6P5S7 137 aaKnown RBP5.88□□□□□ -1.47
LRRC28-211ENST00000558890 C16orf54Q6UWD8 224 aa5.88□□□□□ -1.47
LRRC28-211ENST00000558890 SHISA2Q6UWI4 295 aa5.88□□□□□ -1.47
LRRC28-211ENST00000558890 LINC00322Q6ZN03 302 aaPredicted RBP5.88□□□□□ -1.47
LRRC28-211ENST00000558890 GTSF1Q8WW33 167 aa5.88□□□□□ -1.47
LRRC28-211ENST00000558890 ZC2HC1AQ96GY0 325 aa5.88□□□□□ -1.47
LRRC28-211ENST00000558890 C14orf144Q96I85 54 aa5.88□□□□□ -1.47
LRRC28-211ENST00000558890 C17orf77Q96MU5 243 aa5.88□□□□□ -1.47
LRRC28-211ENST00000558890 ALKBH7Q9BT30 221 aaPredicted RBP5.88□□□□□ -1.47
LRRC28-211ENST00000558890 NDUFAF3Q9BU61 184 aa5.88□□□□□ -1.47
LRRC28-211ENST00000558890 VAMP8Q9BV40 100 aa5.88□□□□□ -1.47
LRRC28-211ENST00000558890 NRN1Q9NPD7 142 aa5.88□□□□□ -1.47
LRRC28-211ENST00000558890 A0A087X0K7 114 aa5.87□□□□□ -1.47
LRRC28-211ENST00000558890 A0A1B0GUT8 65 aa5.87□□□□□ -1.47
LRRC28-211ENST00000558890 A0A1W2PS18 150 aa5.87□□□□□ -1.47
LRRC28-211ENST00000558890 A8MWP6 167 aa5.87□□□□□ -1.47
LRRC28-211ENST00000558890 M0R3E3 92 aa5.87□□□□□ -1.47
LRRC28-211ENST00000558890 CTSGP08311 255 aa5.87□□□□□ -1.47
LRRC28-211ENST00000558890 PF4V1P10720 104 aa5.87□□□□□ -1.47
LRRC28-211ENST00000558890 NTF3P20783 257 aa5.87□□□□□ -1.47
LRRC28-211ENST00000558890 ATP5G2Q06055 141 aa5.87□□□□□ -1.47
LRRC28-211ENST00000558890 FHL3Q13643 280 aa5.87□□□□□ -1.47
LRRC28-211ENST00000558890 LBHQ53QV2 105 aaPredicted RBP5.87□□□□□ -1.47
LRRC28-211ENST00000558890 HIST2H2BDQ6DRA6 164 aa5.87□□□□□ -1.47
LRRC28-211ENST00000558890 C10orf99Q6UWK7 81 aa5.87□□□□□ -1.47
LRRC28-211ENST00000558890 TEX43Q6ZNM6 134 aa5.87□□□□□ -1.47
LRRC28-211ENST00000558890 C3orf56Q8N813 242 aa5.87□□□□□ -1.47
LRRC28-211ENST00000558890 RCHY1Q96PM5 261 aa5.87□□□□□ -1.47
LRRC28-211ENST00000558890 METTL26Q96S19 204 aa5.87□□□□□ -1.47
LRRC28-211ENST00000558890 SLC50A1Q9BRV3 221 aa5.87□□□□□ -1.47
LRRC28-211ENST00000558890 SSBP4Q9BWG4 385 aaPredicted RBP5.87□□□□□ -1.47
LRRC28-211ENST00000558890 MEGF8Q7Z7M0 2845 aa5.86□□□□□ -1.47
LRRC28-211ENST00000558890 TMEM189A5PLL7 270 aa5.86□□□□□ -1.47
LRRC28-211ENST00000558890 M0R2Z0 102 aa5.86□□□□□ -1.47
LRRC28-211ENST00000558890 BMI1P35226 326 aa5.86□□□□□ -1.47
LRRC28-211ENST00000558890 CLEC19AQ6UXS0 136 aa5.86□□□□□ -1.47
LRRC28-211ENST00000558890 CHCHD1Q96BP2 118 aaKnown RBP5.86□□□□□ -1.47
LRRC28-211ENST00000558890 C20orf144Q9BQM9 153 aa5.86□□□□□ -1.47
LRRC28-211ENST00000558890 IGKV2-40A0A087WW87 121 aaPredicted RBP5.85□□□□□ -1.47
LRRC28-211ENST00000558890 LOC102724200A0A096LPH7 203 aaPredicted RBP5.85□□□□□ -1.47
LRRC28-211ENST00000558890 C20orf202A1L168 122 aa5.85□□□□□ -1.47
LRRC28-211ENST00000558890 LGALS9O00182 355 aa5.85□□□□□ -1.47
LRRC28-211ENST00000558890 SH2D1AO60880 128 aa5.85□□□□□ -1.47
LRRC28-211ENST00000558890 IGKV2D-40P01614 121 aaPredicted RBP5.85□□□□□ -1.47
LRRC28-211ENST00000558890 RPLP1P05386 114 aaKnown RBP5.85□□□□□ -1.47
LRRC28-211ENST00000558890 CLEC3BP05452 202 aa5.85□□□□□ -1.47
LRRC28-211ENST00000558890 CD28P10747 220 aa5.85□□□□□ -1.47
LRRC28-211ENST00000558890 FOXA3P55318 350 aaPredicted RBP5.85□□□□□ -1.47
LRRC28-211ENST00000558890 PMCHL1Q16048 86 aa5.85□□□□□ -1.47
LRRC28-211ENST00000558890 PRR31Q5SQ13 230 aa5.85□□□□□ -1.47
LRRC28-211ENST00000558890 COX8CQ7Z4L0 72 aa5.85□□□□□ -1.47
LRRC28-211ENST00000558890 MRPL52Q86TS9 123 aaKnown RBP5.85□□□□□ -1.47
LRRC28-211ENST00000558890 GATD1Q8NB37 220 aa5.85□□□□□ -1.47
LRRC28-211ENST00000558890 CCDC140Q96MF4 163 aa5.85□□□□□ -1.47
LRRC28-211ENST00000558890 C8orf49Q96NF6 230 aa5.85□□□□□ -1.47
LRRC28-211ENST00000558890 KLK15Q9H2R5 256 aa5.85□□□□□ -1.47
LRRC28-211ENST00000558890 CLEC5AQ9NY25 188 aa5.85□□□□□ -1.47
LRRC28-211ENST00000558890 PEF1Q9UBV8 284 aaKnown RBP5.85□□□□□ -1.47
LRRC28-211ENST00000558890 LINC00527Q9UJ94 153 aa5.85□□□□□ -1.47
LRRC28-211ENST00000558890 IGHV3-35A0A0C4DH35 117 aa5.84□□□□□ -1.47
LRRC28-211ENST00000558890 RBAKDNA6NC62 111 aa5.84□□□□□ -1.47
LRRC28-211ENST00000558890 NDUFA4O00483 81 aa5.84□□□□□ -1.47
LRRC28-211ENST00000558890 BUB3O43684 328 aa5.84□□□□□ -1.47
LRRC28-211ENST00000558890 NIT1Q86X76 327 aa5.84□□□□□ -1.47
LRRC28-211ENST00000558890 GPHB5Q86YW7 130 aa5.84□□□□□ -1.47
LRRC28-211ENST00000558890 FAM19A2Q8N3H0 131 aa5.84□□□□□ -1.47
LRRC28-211ENST00000558890 MRPL53Q96EL3 112 aaKnown RBP5.84□□□□□ -1.47
LRRC28-211ENST00000558890 PRR25Q96S07 402 aa5.84□□□□□ -1.47
LRRC28-211ENST00000558890 TPPP3Q9BW30 176 aa5.84□□□□□ -1.47
LRRC28-211ENST00000558890 PAM16Q9Y3D7 125 aa5.84□□□□□ -1.47
LRRC28-211ENST00000558890 K7EMT4 169 aa5.83□□□□□ -1.48
LRRC28-211ENST00000558890 M0QZ24 198 aa5.83□□□□□ -1.48
LRRC28-211ENST00000558890 M0R143 59 aa5.83□□□□□ -1.48
LRRC28-211ENST00000558890 APOHP02749 345 aaPredicted RBP5.83□□□□□ -1.48
LRRC28-211ENST00000558890 OR5AL1P0C617 328 aa5.83□□□□□ -1.48
LRRC28-211ENST00000558890 ARMS2P0C7Q2 107 aa5.83□□□□□ -1.48
LRRC28-211ENST00000558890 C3orf79P0CE67 100 aa5.83□□□□□ -1.48
LRRC28-211ENST00000558890 CD33P20138 364 aa5.83□□□□□ -1.48
LRRC28-211ENST00000558890 BTF3P20290 206 aaKnown RBP5.83□□□□□ -1.48
LRRC28-211ENST00000558890 ARL3P36405 182 aa5.83□□□□□ -1.48
LRRC28-211ENST00000558890 LCN12Q6JVE5 192 aa5.83□□□□□ -1.48
LRRC28-211ENST00000558890 ZNF705AQ6ZN79 300 aaPredicted RBP5.83□□□□□ -1.48
LRRC28-211ENST00000558890 FER1L6-AS1Q8NA97 138 aa5.83□□□□□ -1.48
LRRC28-211ENST00000558890 KLHL30-AS1Q8NEE0 82 aa5.83□□□□□ -1.48
LRRC28-211ENST00000558890 Q8TAT8 98 aa5.83□□□□□ -1.48
LRRC28-211ENST00000558890 CITED2Q99967 270 aaPredicted RBP5.83□□□□□ -1.48
LRRC28-211ENST00000558890 MIEN1Q9BRT3 115 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms