RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 MT-ND6P03923 174 aa8.32□□□□□ -1.08
CSPG4P5-201ENST00000558731 FOXA3P55318 350 aaPredicted RBP8.32□□□□□ -1.08
CSPG4P5-201ENST00000558731 MPV17L2Q567V2 206 aa8.32□□□□□ -1.08
CSPG4P5-201ENST00000558731 GRAMD2BQ96HH9 432 aa8.32□□□□□ -1.08
CSPG4P5-201ENST00000558731 PSMG3-AS1Q96PY0 264 aa8.32□□□□□ -1.08
CSPG4P5-201ENST00000558731 ZFAND3Q9H8U3 227 aa8.32□□□□□ -1.08
CSPG4P5-201ENST00000558731 PMCHL1Q16048 86 aa8.32□□□□□ -1.08
CSPG4P5-201ENST00000558731 PSG3Q16557 428 aa8.32□□□□□ -1.08
CSPG4P5-201ENST00000558731 NUP35Q8NFH5 326 aa8.32□□□□□ -1.08
CSPG4P5-201ENST00000558731 RHPN1-AS1Q9BWJ2 59 aa8.32□□□□□ -1.08
CSPG4P5-201ENST00000558731 TP73-AS1Q9UF72 201 aa8.32□□□□□ -1.08
CSPG4P5-201ENST00000558731 SMAD5-AS1Q9Y6J3 95 aa8.32□□□□□ -1.08
CSPG4P5-201ENST00000558731 A8MWL6 223 aa8.32□□□□□ -1.08
CSPG4P5-201ENST00000558731 MYCNOSP40205 109 aa8.32□□□□□ -1.08
CSPG4P5-201ENST00000558731 TCTAP57738 103 aa8.32□□□□□ -1.08
CSPG4P5-201ENST00000558731 FAM106AQ4KMX7 169 aa8.32□□□□□ -1.08
CSPG4P5-201ENST00000558731 AMMECR1LQ6DCA0 310 aa8.32□□□□□ -1.08
CSPG4P5-201ENST00000558731 PEF1Q9UBV8 284 aaKnown RBP8.32□□□□□ -1.08
CSPG4P5-201ENST00000558731 K7ERU9 68 aa8.31□□□□□ -1.08
CSPG4P5-201ENST00000558731 SNAI2O43623 268 aa8.31□□□□□ -1.08
CSPG4P5-201ENST00000558731 IGF1P05019 195 aa8.31□□□□□ -1.08
CSPG4P5-201ENST00000558731 Q0VG73 95 aa8.31□□□□□ -1.08
CSPG4P5-201ENST00000558731 DPF1Q92782 380 aa8.31□□□□□ -1.08
CSPG4P5-201ENST00000558731 LY96Q9Y6Y9 160 aa8.31□□□□□ -1.08
CSPG4P5-201ENST00000558731 F6UB75 175 aa8.31□□□□□ -1.08
CSPG4P5-201ENST00000558731 HLA-DQA1P01909 254 aa8.31□□□□□ -1.08
CSPG4P5-201ENST00000558731 SRSF2Q01130 221 aaKnown RBP8.31□□□□□ -1.08
CSPG4P5-201ENST00000558731 HIST1H1AQ02539 215 aaPredicted RBP8.31□□□□□ -1.08
CSPG4P5-201ENST00000558731 C8orf86Q6ZUL3 223 aa8.31□□□□□ -1.08
CSPG4P5-201ENST00000558731 USMG5Q96IX5 58 aa8.31□□□□□ -1.08
CSPG4P5-201ENST00000558731 GNB1LQ9BYB4 327 aa8.31□□□□□ -1.08
CSPG4P5-201ENST00000558731 CSN3P07498 182 aa8.31□□□□□ -1.08
CSPG4P5-201ENST00000558731 TMEM78Q5T7P6 136 aa8.31□□□□□ -1.08
CSPG4P5-201ENST00000558731 TSKUQ8WUA8 353 aa8.31□□□□□ -1.08
CSPG4P5-201ENST00000558731 TRAV9-2A0A087WT02 112 aa8.3□□□□□ -1.08
CSPG4P5-201ENST00000558731 NIT1Q86X76 327 aa8.3□□□□□ -1.08
CSPG4P5-201ENST00000558731 CST9LQ9H4G1 147 aa8.3□□□□□ -1.08
CSPG4P5-201ENST00000558731 CR1P17927 2039 aa8.3□□□□□ -1.08
CSPG4P5-201ENST00000558731 LTAP01374 205 aa8.3□□□□□ -1.08
CSPG4P5-201ENST00000558731 CLPSL1A2RUU4 121 aa8.3□□□□□ -1.08
CSPG4P5-201ENST00000558731 TMEM189A5PLL7 270 aa8.3□□□□□ -1.08
CSPG4P5-201ENST00000558731 LRRC75A-AS1Q8N1F1 130 aa8.3□□□□□ -1.08
CSPG4P5-201ENST00000558731 MCRIP2Q9BUT9 160 aaKnown RBP8.3□□□□□ -1.08
CSPG4P5-201ENST00000558731 IGLL1P15814 213 aa8.29□□□□□ -1.08
CSPG4P5-201ENST00000558731 OCIAD2Q56VL3 154 aa8.29□□□□□ -1.08
CSPG4P5-201ENST00000558731 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.29□□□□□ -1.08
CSPG4P5-201ENST00000558731 C18orf65Q6ZTR6 163 aa8.29□□□□□ -1.08
CSPG4P5-201ENST00000558731 PMCHL2Q9BQD1 86 aa8.29□□□□□ -1.08
CSPG4P5-201ENST00000558731 IZUMO1RA6ND01 250 aa8.29□□□□□ -1.08
CSPG4P5-201ENST00000558731 OR4C46A6NHA9 309 aa8.29□□□□□ -1.08
CSPG4P5-201ENST00000558731 Q6YL49 198 aa8.29□□□□□ -1.08
CSPG4P5-201ENST00000558731 MRPS12O15235 138 aaKnown RBP8.29□□□□□ -1.08
CSPG4P5-201ENST00000558731 ZNF688P0C7X2 276 aa8.29□□□□□ -1.08
CSPG4P5-201ENST00000558731 PDE6HQ13956 83 aa8.29□□□□□ -1.08
CSPG4P5-201ENST00000558731 OR10J3Q5JRS4 329 aa8.29□□□□□ -1.08
CSPG4P5-201ENST00000558731 hDV102S1A0JD36 115 aa8.28□□□□□ -1.08
CSPG4P5-201ENST00000558731 DAZ1Q9NQZ3 744 aaKnown RBP8.28□□□□□ -1.08
CSPG4P5-201ENST00000558731 KMT2BQ9UMN6 2715 aaPredicted RBP8.28□□□□□ -1.08
CSPG4P5-201ENST00000558731 SH2D1AO60880 128 aa8.28□□□□□ -1.08
CSPG4P5-201ENST00000558731 LYPD1Q8N2G4 141 aa8.28□□□□□ -1.08
CSPG4P5-201ENST00000558731 MRPS16Q9Y3D3 137 aaKnown RBP8.28□□□□□ -1.08
CSPG4P5-201ENST00000558731 TRAV9-1A0A075B6T8 112 aa8.28□□□□□ -1.08
CSPG4P5-201ENST00000558731 NDUFA4O00483 81 aa8.28□□□□□ -1.08
CSPG4P5-201ENST00000558731 SPRY2O43597 315 aa8.28□□□□□ -1.08
CSPG4P5-201ENST00000558731 HTN1P15515 57 aa8.28□□□□□ -1.08
CSPG4P5-201ENST00000558731 SLC25A34Q6PIV7 304 aa8.28□□□□□ -1.08
CSPG4P5-201ENST00000558731 TMEM136Q6ZRR5 245 aa8.28□□□□□ -1.08
CSPG4P5-201ENST00000558731 NAA38Q9BRA0 125 aaKnown RBP8.28□□□□□ -1.08
CSPG4P5-201ENST00000558731 KLF12Q9Y4X4 402 aa8.28□□□□□ -1.08
CSPG4P5-201ENST00000558731 C2CD3Q4AC94 2353 aa8.27□□□□□ -1.08
CSPG4P5-201ENST00000558731 IGLV2-11P01706 119 aa8.27□□□□□ -1.09
CSPG4P5-201ENST00000558731 CTRLP40313 264 aa8.27□□□□□ -1.09
CSPG4P5-201ENST00000558731 SLAQ13239 276 aa8.27□□□□□ -1.09
CSPG4P5-201ENST00000558731 TEP1Q99973 2627 aaKnown RBP8.27□□□□□ -1.09
CSPG4P5-201ENST00000558731 GAGE10A6NGK3 116 aa8.27□□□□□ -1.09
CSPG4P5-201ENST00000558731 ARMS2P0C7Q2 107 aa8.27□□□□□ -1.09
CSPG4P5-201ENST00000558731 COX19Q49B96 90 aa8.27□□□□□ -1.09
CSPG4P5-201ENST00000558731 KRTAP1-3Q8IUG1 177 aa8.27□□□□□ -1.09
CSPG4P5-201ENST00000558731 GTSF1Q8WW33 167 aa8.27□□□□□ -1.09
CSPG4P5-201ENST00000558731 PRR25Q96S07 402 aa8.27□□□□□ -1.09
CSPG4P5-201ENST00000558731 SLC50A1Q9BRV3 221 aa8.27□□□□□ -1.09
CSPG4P5-201ENST00000558731 IGHV4OR15-8A0A075B7B6 117 aa8.27□□□□□ -1.09
CSPG4P5-201ENST00000558731 A0A087WW49 117 aa8.27□□□□□ -1.09
CSPG4P5-201ENST00000558731 SLURP1P55000 103 aa8.27□□□□□ -1.09
CSPG4P5-201ENST00000558731 FAM162BQ5T6X4 162 aa8.27□□□□□ -1.09
CSPG4P5-201ENST00000558731 KLHL30-AS1Q8NEE0 82 aa8.27□□□□□ -1.09
CSPG4P5-201ENST00000558731 TMEM70Q9BUB7 260 aa8.27□□□□□ -1.09
CSPG4P5-201ENST00000558731 SMIM27A0A1W2PRY6 76 aa8.26□□□□□ -1.09
CSPG4P5-201ENST00000558731 OR10J6PQ8NGY7 276 aa8.26□□□□□ -1.09
CSPG4P5-201ENST00000558731 F8P00451 2351 aa8.26□□□□□ -1.09
CSPG4P5-201ENST00000558731 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.26□□□□□ -1.09
CSPG4P5-201ENST00000558731 GAGE12BA1L429 117 aa8.26□□□□□ -1.09
CSPG4P5-201ENST00000558731 ESDP10768 282 aa8.26□□□□□ -1.09
CSPG4P5-201ENST00000558731 HBBP68871 147 aa8.26□□□□□ -1.09
CSPG4P5-201ENST00000558731 RBPMS2Q6ZRY4 209 aaKnown RBP8.26□□□□□ -1.09
CSPG4P5-201ENST00000558731 C18orf32Q8TCD1 76 aa8.26□□□□□ -1.09
CSPG4P5-201ENST00000558731 MLST8Q9BVC4 326 aa8.26□□□□□ -1.09
CSPG4P5-201ENST00000558731 AGPAT4-IT1Q9H0P7 198 aa8.26□□□□□ -1.09
CSPG4P5-201ENST00000558731 ZNF702PQ9H963 129 aa8.26□□□□□ -1.09
CSPG4P5-201ENST00000558731 AGRNO00468 2067 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms