RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 OR4K13Q8NH42 304 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 HIST1H2BHQ93079 126 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 BORCS8Q96FH0 119 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 C14orf144Q96I85 54 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 PPP3R2Q96LZ3 170 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 HIST1H2BNQ99877 126 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 HIST1H2BMQ99879 126 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 SHANK2-AS3Q9BTD1 123 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 TSSK6Q9BXA6 273 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 IFI27L2Q9H2X8 130 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 ZNRD1Q9P1U0 126 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 TP53TG3Q9ULZ0 132 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 TMEM14AQ9Y6G1 99 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 EXPH5Q8NEV8 1989 aa2.76□□□□□ -1.97
LRRC28-205ENST00000558248 TRAV41A0A0B4J266 112 aa2.76□□□□□ -1.97
LRRC28-205ENST00000558248 IGKV1-12A0A0C4DH73 117 aa2.76□□□□□ -1.97
LRRC28-205ENST00000558248 FABP5P3A8MUU1 101 aa2.76□□□□□ -1.97
LRRC28-205ENST00000558248 TAX1BP3O14907 124 aa2.76□□□□□ -1.97
LRRC28-205ENST00000558248 RBFOX2O43251 390 aaKnown RBP eCLIP2.76□□□□□ -1.97
LRRC28-205ENST00000558248 GNG7O60262 68 aa2.76□□□□□ -1.97
LRRC28-205ENST00000558248 GGCTO75223 188 aaKnown RBP2.76□□□□□ -1.97
LRRC28-205ENST00000558248 NRASP01111 189 aa2.76□□□□□ -1.97
LRRC28-205ENST00000558248 IGKV1D-12P01611 117 aa2.76□□□□□ -1.97
LRRC28-205ENST00000558248 TRGC2P03986 189 aa2.76□□□□□ -1.97
LRRC28-205ENST00000558248 IFNA4P05014 189 aa2.76□□□□□ -1.97
LRRC28-205ENST00000558248 S100A4P26447 101 aaKnown RBP2.76□□□□□ -1.97
LRRC28-205ENST00000558248 FKBP2P26885 142 aaKnown RBP2.76□□□□□ -1.97
LRRC28-205ENST00000558248 CSN1S1P47710 185 aa2.76□□□□□ -1.97
LRRC28-205ENST00000558248 RBP2P50120 134 aa2.76□□□□□ -1.97
LRRC28-205ENST00000558248 ZNF80P51504 273 aaPredicted RBP2.76□□□□□ -1.97
LRRC28-205ENST00000558248 RPS25P62851 125 aaKnown RBP2.76□□□□□ -1.97
LRRC28-205ENST00000558248 DYNLT1P63172 113 aa2.76□□□□□ -1.97
LRRC28-205ENST00000558248 ELF3P78545 371 aaPredicted RBP2.76□□□□□ -1.97
LRRC28-205ENST00000558248 SYCNQ0VAF6 134 aa2.76□□□□□ -1.97
LRRC28-205ENST00000558248 NEDD8Q15843 81 aa2.76□□□□□ -1.97
LRRC28-205ENST00000558248 TMEM69Q5SWH9 247 aa2.76□□□□□ -1.97
LRRC28-205ENST00000558248 DNLZQ5SXM8 178 aa2.76□□□□□ -1.97
LRRC28-205ENST00000558248 AMN1Q8IY45 258 aa2.76□□□□□ -1.97
LRRC28-205ENST00000558248 DAND5Q8N907 189 aa2.76□□□□□ -1.97
LRRC28-205ENST00000558248 OR5C1Q8NGR4 320 aa2.76□□□□□ -1.97
LRRC28-205ENST00000558248 FNDC9Q8TBE3 224 aa2.76□□□□□ -1.97
LRRC28-205ENST00000558248 SLAMF6Q96DU3 332 aa2.76□□□□□ -1.97
LRRC28-205ENST00000558248 AP1S3Q96PC3 154 aa2.76□□□□□ -1.97
LRRC28-205ENST00000558248 PRADC1Q9BSG0 188 aa2.76□□□□□ -1.97
LRRC28-205ENST00000558248 ZNF586Q9NXT0 402 aa2.76□□□□□ -1.97
LRRC28-205ENST00000558248 ZNF230Q9UIE0 474 aaPredicted RBP2.76□□□□□ -1.97
LRRC28-205ENST00000558248 KLK5Q9Y337 293 aaPredicted RBP2.76□□□□□ -1.97
LRRC28-205ENST00000558248 ARFGEF3Q5TH69 2177 aa2.76□□□□□ -1.97
LRRC28-205ENST00000558248 PLCE1Q9P212 2302 aa2.75□□□□□ -1.97
LRRC28-205ENST00000558248 A0A1B0GW64 132 aa2.75□□□□□ -1.97
LRRC28-205ENST00000558248 A6NDX4 124 aa2.75□□□□□ -1.97
LRRC28-205ENST00000558248 ARRDC5A6NEK1 342 aa2.75□□□□□ -1.97
LRRC28-205ENST00000558248 B4DSR2 109 aa2.75□□□□□ -1.97
LRRC28-205ENST00000558248 H7BYZ3 331 aa2.75□□□□□ -1.97
LRRC28-205ENST00000558248 TP53I11O14683 189 aa2.75□□□□□ -1.97
LRRC28-205ENST00000558248 BCL2L11O43521 198 aa2.75□□□□□ -1.97
LRRC28-205ENST00000558248 IGHV1-46P01743 117 aa2.75□□□□□ -1.97
LRRC28-205ENST00000558248 IGKV3-11P04433 115 aa2.75□□□□□ -1.97
LRRC28-205ENST00000558248 OR5AC1P0C628 307 aa2.75□□□□□ -1.97
LRRC28-205ENST00000558248 TLX1NBP0CAT3 122 aa2.75□□□□□ -1.97
LRRC28-205ENST00000558248 INAFM2P0DMQ5 153 aa2.75□□□□□ -1.97
LRRC28-205ENST00000558248 SLC38A11Q08AI6 406 aa2.75□□□□□ -1.97
LRRC28-205ENST00000558248 BIKQ13323 160 aa2.75□□□□□ -1.97
LRRC28-205ENST00000558248 SSX8Q7RTT4 187 aa2.75□□□□□ -1.97
LRRC28-205ENST00000558248 LHFPL1Q86WI0 220 aa2.75□□□□□ -1.97
LRRC28-205ENST00000558248 MMGT1Q8N4V1 131 aa2.75□□□□□ -1.97
LRRC28-205ENST00000558248 SIGLECL1Q8N7X8 197 aa2.75□□□□□ -1.97
LRRC28-205ENST00000558248 Q8N9W7 124 aa2.75□□□□□ -1.97
LRRC28-205ENST00000558248 OR5W2Q8NH69 310 aa2.75□□□□□ -1.97
LRRC28-205ENST00000558248 MAGOHBQ96A72 148 aaKnown RBP2.75□□□□□ -1.97
LRRC28-205ENST00000558248 XAGE1AQ9HD64 81 aa2.75□□□□□ -1.97
LRRC28-205ENST00000558248 OTORQ9NRC9 128 aa2.75□□□□□ -1.97
LRRC28-205ENST00000558248 MRPL16Q9NX20 251 aaKnown RBP2.75□□□□□ -1.97
LRRC28-205ENST00000558248 OR5AC2Q9NZP5 309 aa2.75□□□□□ -1.97
LRRC28-205ENST00000558248 CELA1Q9UNI1 258 aa2.75□□□□□ -1.97
LRRC28-205ENST00000558248 PLXNB1O43157 2135 aa2.74□□□□□ -1.97
LRRC28-205ENST00000558248 HEATR1Q9H583 2144 aaKnown RBP2.74□□□□□ -1.97
LRRC28-205ENST00000558248 COL7A1Q02388 2944 aa2.74□□□□□ -1.97
LRRC28-205ENST00000558248 UQCRHLA0A096LP55 91 aa2.74□□□□□ -1.97
LRRC28-205ENST00000558248 IRGMA1A4Y4 181 aa2.74□□□□□ -1.97
LRRC28-205ENST00000558248 C20orf202A1L168 122 aa2.74□□□□□ -1.97
LRRC28-205ENST00000558248 MEIS3P1A6NDR6 274 aa2.74□□□□□ -1.97
LRRC28-205ENST00000558248 F6UZH7 168 aa2.74□□□□□ -1.97
LRRC28-205ENST00000558248 M0R378 163 aa2.74□□□□□ -1.97
LRRC28-205ENST00000558248 SLC22A1O15245 554 aa2.74□□□□□ -1.97
LRRC28-205ENST00000558248 NDUFB2O95178 105 aa2.74□□□□□ -1.97
LRRC28-205ENST00000558248 HRASP01112 189 aa2.74□□□□□ -1.97
LRRC28-205ENST00000558248 KRASP01116 189 aa2.74□□□□□ -1.97
LRRC28-205ENST00000558248 MSMBP08118 114 aa2.74□□□□□ -1.97
LRRC28-205ENST00000558248 P0DMU3 169 aa2.74□□□□□ -1.97
LRRC28-205ENST00000558248 FAM231AP0DMU4 169 aa2.74□□□□□ -1.97
LRRC28-205ENST00000558248 FAM231CP0DMU5 169 aa2.74□□□□□ -1.97
LRRC28-205ENST00000558248 IGHV3-30-3P0DP02 117 aa2.74□□□□□ -1.97
LRRC28-205ENST00000558248 CD28P10747 220 aa2.74□□□□□ -1.97
LRRC28-205ENST00000558248 LGALS3P17931 250 aaKnown RBP2.74□□□□□ -1.97
LRRC28-205ENST00000558248 NTF3P20783 257 aa2.74□□□□□ -1.97
LRRC28-205ENST00000558248 NPPCP23582 126 aa2.74□□□□□ -1.97
LRRC28-205ENST00000558248 FXYD7P58549 80 aa2.74□□□□□ -1.97
LRRC28-205ENST00000558248 TSPEAR-AS2P59090 65 aa2.74□□□□□ -1.97
LRRC28-205ENST00000558248 TAS2R20P59543 309 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms