RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 IGHV3-43A0A0B4J1X8 118 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 TRAV1-1A0A0B4J248 108 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 IGKV2-24A0A0C4DH68 120 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 IGHV7-4-1A0A0J9YVY3 117 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 A0A1B0GW54 56 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 A6NED7 52 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 FAM24AA6NFZ4 105 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 A8MWL6 223 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 GNGT2O14610 69 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 UBL3O95164 117 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 SFT2D2O95562 160 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 TRGV3P03979 118 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 ZNF688P0C7X2 276 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 CCL3P10147 92 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 RPL27AP46776 148 aaKnown RBP1.58□□□□□ -2.16
SPG11-206ENST00000558093 HINT1P49773 126 aaPredicted RBP1.58□□□□□ -2.16
SPG11-206ENST00000558093 TSPEAR-AS2P59090 65 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 NPC2P61916 151 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 CIRBPQ14011 172 aaKnown RBP1.58□□□□□ -2.16
SPG11-206ENST00000558093 IGFBP7Q16270 282 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 MRPL51Q4U2R6 128 aaKnown RBP1.58□□□□□ -2.16
SPG11-206ENST00000558093 SPRNQ5BIV9 151 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 NOXRED1Q6NXP6 359 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 PATE2Q6UY27 113 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 MIR17HGQ75NE6 70 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 MIR7-3HGQ8N6C7 128 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 ZFAND2AQ8N6M9 145 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 ATP6V0E2Q8NHE4 81 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 DIRC1Q969H9 104 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 MCEEQ96PE7 176 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 GABARAPL1Q9H0R8 117 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 HHLA3Q9XRX5 114 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 TOPAZ1Q8N9V7 1692 aa1.58□□□□□ -2.16
SPG11-206ENST00000558093 HFM1A2PYH4 1435 aa1.57□□□□□ -2.16
SPG11-206ENST00000558093 NWD2Q9ULI1 1742 aa1.57□□□□□ -2.16
SPG11-206ENST00000558093 NLRP1Q9C000 1473 aa1.57□□□□□ -2.16
SPG11-206ENST00000558093 UGGT2Q9NYU1 1516 aa1.57□□□□□ -2.16
SPG11-206ENST00000558093 IGHV3-21A0A0B4J1V1 117 aa1.57□□□□□ -2.16
SPG11-206ENST00000558093 MDFIC2A0A1B0GVS7 189 aa1.57□□□□□ -2.16
SPG11-206ENST00000558093 A8MWP4 228 aa1.57□□□□□ -2.16
SPG11-206ENST00000558093 C3orf84H3BNL1 204 aa1.57□□□□□ -2.16
SPG11-206ENST00000558093 K7ERS5 55 aa1.57□□□□□ -2.16
SPG11-206ENST00000558093 TCL1BO95988 128 aa1.57□□□□□ -2.16
SPG11-206ENST00000558093 SOD1P00441 154 aa1.57□□□□□ -2.16
SPG11-206ENST00000558093 IGKV1D-33P01593 117 aa1.57□□□□□ -2.16
SPG11-206ENST00000558093 IGKV1-33P01594 117 aa1.57□□□□□ -2.16
SPG11-206ENST00000558093 IGHV3-7P01780 117 aa1.57□□□□□ -2.16
SPG11-206ENST00000558093 GYPBP06028 91 aa1.57□□□□□ -2.16
SPG11-206ENST00000558093 COX6A1P12074 109 aa1.57□□□□□ -2.16
SPG11-206ENST00000558093 COX7CP15954 63 aa1.57□□□□□ -2.16
SPG11-206ENST00000558093 SLC25A16P16260 332 aa1.57□□□□□ -2.16
SPG11-206ENST00000558093 NPPCP23582 126 aa1.57□□□□□ -2.16
SPG11-206ENST00000558093 KRTAP12-3P60328 96 aa1.57□□□□□ -2.16
SPG11-206ENST00000558093 HIST1H4AP62805 103 aaKnown RBP1.57□□□□□ -2.16
SPG11-206ENST00000558093 DYNLT1P63172 113 aa1.57□□□□□ -2.16
SPG11-206ENST00000558093 FUT5Q11128 374 aa1.57□□□□□ -2.16
SPG11-206ENST00000558093 C10orf91Q5T1B1 145 aa1.57□□□□□ -2.16
SPG11-206ENST00000558093 FP248Q71RG6 208 aaPredicted RBP1.57□□□□□ -2.16
SPG11-206ENST00000558093 AMN1Q8IY45 258 aa1.57□□□□□ -2.16
SPG11-206ENST00000558093 OR5AS1Q8N127 324 aa1.57□□□□□ -2.16
SPG11-206ENST00000558093 Q8N2B8 174 aa1.57□□□□□ -2.16
SPG11-206ENST00000558093 FAM216BQ8N7L0 139 aa1.57□□□□□ -2.16
SPG11-206ENST00000558093 SIGLECL1Q8N7X8 197 aa1.57□□□□□ -2.16
SPG11-206ENST00000558093 ZNF431Q8TF32 576 aaPredicted RBP1.57□□□□□ -2.16
SPG11-206ENST00000558093 S100A16Q96FQ6 103 aaKnown RBP1.57□□□□□ -2.16
SPG11-206ENST00000558093 PMCHL2Q9BQD1 86 aa1.57□□□□□ -2.16
SPG11-206ENST00000558093 C11orf1Q9H5F2 150 aa1.57□□□□□ -2.16
SPG11-206ENST00000558093 TRPM1Q7Z4N2 1603 aa1.57□□□□□ -2.16
SPG11-206ENST00000558093 MED12LQ86YW9 2145 aa1.57□□□□□ -2.16
SPG11-206ENST00000558093 ARFGEF2Q9Y6D5 1785 aa1.57□□□□□ -2.16
SPG11-206ENST00000558093 ABCC5O15440 1437 aa1.57□□□□□ -2.16
SPG11-206ENST00000558093 PXDNLA1KZ92 1463 aa1.56□□□□□ -2.16
SPG11-206ENST00000558093 MLH3Q9UHC1 1453 aa1.56□□□□□ -2.16
SPG11-206ENST00000558093 PLXNA1Q9UIW2 1896 aa1.56□□□□□ -2.16
SPG11-206ENST00000558093 EPRSP07814 1512 aaKnown RBP1.56□□□□□ -2.16
SPG11-206ENST00000558093 MADDQ8WXG6 1647 aa1.56□□□□□ -2.16
SPG11-206ENST00000558093 TET3O43151 1660 aa1.56□□□□□ -2.16
SPG11-206ENST00000558093 IGLV3-9A0A075B6K5 115 aa1.56□□□□□ -2.16
SPG11-206ENST00000558093 C19orf71A6NCJ1 209 aa1.56□□□□□ -2.16
SPG11-206ENST00000558093 ZNF705FA8MVS1 300 aaPredicted RBP1.56□□□□□ -2.16
SPG11-206ENST00000558093 ZNF736B4DX44 427 aaPredicted RBP1.56□□□□□ -2.16
SPG11-206ENST00000558093 F8W1H4 67 aa1.56□□□□□ -2.16
SPG11-206ENST00000558093 LECT2O14960 151 aa1.56□□□□□ -2.16
SPG11-206ENST00000558093 TIMM17BO60830 172 aa1.56□□□□□ -2.16
SPG11-206ENST00000558093 ZNF737O75373 536 aa1.56□□□□□ -2.16
SPG11-206ENST00000558093 SHBGP04278 402 aa1.56□□□□□ -2.16
SPG11-206ENST00000558093 ZNF705BP0CI00 300 aaPredicted RBP1.56□□□□□ -2.16
SPG11-206ENST00000558093 CCL5P13501 91 aa1.56□□□□□ -2.16
SPG11-206ENST00000558093 FAUP35544 74 aaKnown RBP1.56□□□□□ -2.16
SPG11-206ENST00000558093 FXYD7P58549 80 aa1.56□□□□□ -2.16
SPG11-206ENST00000558093 LSM3P62310 102 aaKnown RBP1.56□□□□□ -2.16
SPG11-206ENST00000558093 INSL4Q14641 139 aa1.56□□□□□ -2.16
SPG11-206ENST00000558093 ZNF322Q6U7Q0 402 aaPredicted RBP1.56□□□□□ -2.16
SPG11-206ENST00000558093 SPINT4Q6UDR6 99 aa1.56□□□□□ -2.16
SPG11-206ENST00000558093 ARPINQ7Z6K5 226 aa1.56□□□□□ -2.16
SPG11-206ENST00000558093 SBSPONQ8IVN8 264 aa1.56□□□□□ -2.16
SPG11-206ENST00000558093 CNEP1R1Q8N9A8 125 aa1.56□□□□□ -2.16
SPG11-206ENST00000558093 CIRBP-AS1Q8TBR5 109 aa1.56□□□□□ -2.16
SPG11-206ENST00000558093 CLEC2BQ92478 149 aa1.56□□□□□ -2.16
SPG11-206ENST00000558093 CHCHD1Q96BP2 118 aaKnown RBP1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms