RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 NEGR1Q7Z3B1 354 aa10.83□□□□□ -0.68
SCFD1-224ENST00000557713 IQCF2Q8IXL9 164 aa10.83□□□□□ -0.68
SCFD1-224ENST00000557713 ARPC5LQ9BPX5 153 aa10.83□□□□□ -0.68
SCFD1-224ENST00000557713 OR51M1Q9H341 326 aa10.83□□□□□ -0.68
SCFD1-224ENST00000557713 PTTG2Q9NZH5 202 aa10.83□□□□□ -0.68
SCFD1-224ENST00000557713 TRAV9-2A0A087WT02 112 aa10.82□□□□□ -0.68
SCFD1-224ENST00000557713 A0A087WTM6 91 aa10.82□□□□□ -0.68
SCFD1-224ENST00000557713 FXYD5Q96DB9 178 aa10.82□□□□□ -0.68
SCFD1-224ENST00000557713 DNAH10OSP0CZ25 163 aa10.81□□□□□ -0.68
SCFD1-224ENST00000557713 INAFM2P0DMQ5 153 aa10.81□□□□□ -0.68
SCFD1-224ENST00000557713 KRTAP10-1P60331 282 aa10.81□□□□□ -0.68
SCFD1-224ENST00000557713 ZNF415Q09FC8 603 aa10.81□□□□□ -0.68
SCFD1-224ENST00000557713 OR5C1Q8NGR4 320 aa10.81□□□□□ -0.68
SCFD1-224ENST00000557713 Q8TAT8 98 aa10.81□□□□□ -0.68
SCFD1-224ENST00000557713 THAP6Q8TBB0 222 aa10.81□□□□□ -0.68
SCFD1-224ENST00000557713 ZNF479Q96JC4 524 aa10.81□□□□□ -0.68
SCFD1-224ENST00000557713 MDFICQ9P1T7 246 aa10.81□□□□□ -0.68
SCFD1-224ENST00000557713 LY96Q9Y6Y9 160 aa10.81□□□□□ -0.68
SCFD1-224ENST00000557713 E5RGE8 158 aa10.8□□□□□ -0.68
SCFD1-224ENST00000557713 K7EP13 123 aa10.8□□□□□ -0.68
SCFD1-224ENST00000557713 K7EQD1 137 aa10.8□□□□□ -0.68
SCFD1-224ENST00000557713 OR10J4P0C629 311 aa10.8□□□□□ -0.68
SCFD1-224ENST00000557713 ZNF266Q14584 549 aa10.8□□□□□ -0.68
SCFD1-224ENST00000557713 MUC21Q5SSG8 566 aa10.8□□□□□ -0.68
SCFD1-224ENST00000557713 WFDC10BQ8IUB3 73 aa10.8□□□□□ -0.68
SCFD1-224ENST00000557713 OR10G4Q8NGN3 311 aa10.8□□□□□ -0.68
SCFD1-224ENST00000557713 RASL10AQ92737 203 aa10.8□□□□□ -0.68
SCFD1-224ENST00000557713 PHYHIPLQ96FC7 376 aa10.8□□□□□ -0.68
SCFD1-224ENST00000557713 PAXXQ9BUH6 204 aa10.8□□□□□ -0.68
SCFD1-224ENST00000557713 VPS13BQ7Z7G8 4022 aa10.8□□□□□ -0.68
SCFD1-224ENST00000557713 TRGV4A0A0C4DH28 118 aa10.79□□□□□ -0.68
SCFD1-224ENST00000557713 RBAKDNA6NC62 111 aa10.79□□□□□ -0.68
SCFD1-224ENST00000557713 SFTA3P0C7M3 94 aa10.79□□□□□ -0.68
SCFD1-224ENST00000557713 MSRB1Q9NZV6 116 aa10.79□□□□□ -0.68
SCFD1-224ENST00000557713 IFNA5P01569 189 aa10.78□□□□□ -0.68
SCFD1-224ENST00000557713 SRIP30626 198 aa10.78□□□□□ -0.68
SCFD1-224ENST00000557713 RANP62826 216 aaKnown RBP10.78□□□□□ -0.68
SCFD1-224ENST00000557713 Q6AWC8 147 aa10.78□□□□□ -0.68
SCFD1-224ENST00000557713 SPXQ9BT56 116 aa10.78□□□□□ -0.68
SCFD1-224ENST00000557713 WDR61Q9GZS3 305 aaKnown RBP10.78□□□□□ -0.68
SCFD1-224ENST00000557713 SLC25A31Q9H0C2 315 aa10.78□□□□□ -0.68
SCFD1-224ENST00000557713 FAM240BA0A1B0GVZ2 78 aa10.77□□□□□ -0.69
SCFD1-224ENST00000557713 ORM1P02763 201 aa10.77□□□□□ -0.69
SCFD1-224ENST00000557713 GYPEP15421 78 aa10.77□□□□□ -0.69
SCFD1-224ENST00000557713 EVI2AP22794 236 aa10.77□□□□□ -0.69
SCFD1-224ENST00000557713 CSN1S1P47710 185 aa10.77□□□□□ -0.69
SCFD1-224ENST00000557713 Q5VSD8 79 aa10.77□□□□□ -0.69
SCFD1-224ENST00000557713 CCDC32Q9BV29 185 aa10.77□□□□□ -0.69
SCFD1-224ENST00000557713 OR5AC2Q9NZP5 309 aa10.77□□□□□ -0.69
SCFD1-224ENST00000557713 LENEPQ9Y5L5 61 aa10.77□□□□□ -0.69
SCFD1-224ENST00000557713 H0YIZ8 118 aa10.76□□□□□ -0.69
SCFD1-224ENST00000557713 SIX6O95475 246 aa10.76□□□□□ -0.69
SCFD1-224ENST00000557713 TMEM183BQ1AE95 376 aa10.76□□□□□ -0.69
SCFD1-224ENST00000557713 TMEM183AQ8IXX5 376 aa10.76□□□□□ -0.69
SCFD1-224ENST00000557713 FRZBQ92765 325 aa10.76□□□□□ -0.69
SCFD1-224ENST00000557713 KCNIP2Q9NS61 270 aa10.76□□□□□ -0.69
SCFD1-224ENST00000557713 DIRC3C9JPN6 131 aa10.75□□□□□ -0.69
SCFD1-224ENST00000557713 OR7C2O60412 319 aa10.75□□□□□ -0.69
SCFD1-224ENST00000557713 GCSHP23434 173 aa10.75□□□□□ -0.69
SCFD1-224ENST00000557713 TDRG1Q3Y452 100 aa10.75□□□□□ -0.69
SCFD1-224ENST00000557713 FAM159AQ6UWV7 190 aa10.75□□□□□ -0.69
SCFD1-224ENST00000557713 PCNPQ8WW12 178 aaKnown RBP10.75□□□□□ -0.69
SCFD1-224ENST00000557713 NMES1Q9C002 83 aa10.75□□□□□ -0.69
SCFD1-224ENST00000557713 TRGV11A0A075B6L2 103 aa10.74□□□□□ -0.69
SCFD1-224ENST00000557713 TRAV4A0A0B4J268 109 aa10.74□□□□□ -0.69
SCFD1-224ENST00000557713 C17orf112F2Z3M2 114 aa10.74□□□□□ -0.69
SCFD1-224ENST00000557713 TMED6Q8WW62 240 aa10.74□□□□□ -0.69
SCFD1-224ENST00000557713 TXNDC17Q9BRA2 123 aa10.74□□□□□ -0.69
SCFD1-224ENST00000557713 C9JCJ5 164 aa10.73□□□□□ -0.69
SCFD1-224ENST00000557713 GNRH2O43555 120 aa10.73□□□□□ -0.69
SCFD1-224ENST00000557713 SMR3BP02814 79 aaPredicted RBP10.73□□□□□ -0.69
SCFD1-224ENST00000557713 CRYGDP07320 174 aa10.73□□□□□ -0.69
SCFD1-224ENST00000557713 UBE2L3P68036 154 aaKnown RBP10.73□□□□□ -0.69
SCFD1-224ENST00000557713 MZT2BQ6NZ67 158 aa10.73□□□□□ -0.69
SCFD1-224ENST00000557713 OR4C5Q8NGB2 326 aa10.73□□□□□ -0.69
SCFD1-224ENST00000557713 MYCBP2O75592 4640 aa10.72□□□□□ -0.69
SCFD1-224ENST00000557713 IGHV3-16A0A0C4DH30 117 aa10.72□□□□□ -0.69
SCFD1-224ENST00000557713 LOC100131303A0A0U1RQF7 123 aa10.72□□□□□ -0.69
SCFD1-224ENST00000557713 LRCOL1A6NCL2 159 aa10.72□□□□□ -0.69
SCFD1-224ENST00000557713 TIRAPP58753 221 aa10.72□□□□□ -0.69
SCFD1-224ENST00000557713 ASAH1Q13510 395 aa10.72□□□□□ -0.69
SCFD1-224ENST00000557713 LRRC37A5PQ49AS3 106 aa10.72□□□□□ -0.69
SCFD1-224ENST00000557713 C10orf126Q8N4M7 172 aa10.72□□□□□ -0.69
SCFD1-224ENST00000557713 NDUFA13Q9P0J0 144 aa10.72□□□□□ -0.69
SCFD1-224ENST00000557713 M0R2P5 195 aa10.71□□□□□ -0.69
SCFD1-224ENST00000557713 SH2D6Q7Z4S9 175 aa10.71□□□□□ -0.69
SCFD1-224ENST00000557713 ATP5SQ99766 215 aa10.71□□□□□ -0.69
SCFD1-224ENST00000557713 DMBT1Q9UGM3 2413 aaPredicted RBP10.71□□□□□ -0.69
SCFD1-224ENST00000557713 SRRM2Q9UQ35 2752 aaKnown RBP10.71□□□□□ -0.69
SCFD1-224ENST00000557713 DNAH8Q96JB1 4490 aa10.7□□□□□ -0.7
SCFD1-224ENST00000557713 PGPA6NDG6 321 aa10.7□□□□□ -0.7
SCFD1-224ENST00000557713 CYCSP99999 105 aaKnown RBP10.7□□□□□ -0.7
SCFD1-224ENST00000557713 KHDC3LQ587J8 217 aa10.7□□□□□ -0.7
SCFD1-224ENST00000557713 FFAR4Q5NUL3 377 aa10.7□□□□□ -0.7
SCFD1-224ENST00000557713 HYLS1Q96M11 299 aa10.7□□□□□ -0.7
SCFD1-224ENST00000557713 OTORQ9NRC9 128 aa10.7□□□□□ -0.7
SCFD1-224ENST00000557713 NAGKQ9UJ70 344 aa10.7□□□□□ -0.7
SCFD1-224ENST00000557713 IGHV3-38A0A0C4DH36 116 aa10.69□□□□□ -0.7
SCFD1-224ENST00000557713 EIF3GO75821 320 aaKnown RBP eCLIP10.69□□□□□ -0.7
SCFD1-224ENST00000557713 GATA1P15976 413 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms