RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 LENEPQ9Y5L5 61 aa11.08□□□□□ -0.64
NEDD1-213ENST00000557644 STAB2Q8WWQ8 2551 aa11.08□□□□□ -0.64
NEDD1-213ENST00000557644 NHLRC4P0CG21 123 aaPredicted RBP11.08□□□□□ -0.64
NEDD1-213ENST00000557644 SRSF3P84103 164 aaKnown RBP11.08□□□□□ -0.64
NEDD1-213ENST00000557644 TMEM183BQ1AE95 376 aa11.08□□□□□ -0.64
NEDD1-213ENST00000557644 CLLU1Q5K131 121 aa11.08□□□□□ -0.64
NEDD1-213ENST00000557644 ZNF705AQ6ZN79 300 aaPredicted RBP11.08□□□□□ -0.64
NEDD1-213ENST00000557644 FMC1Q96HJ9 113 aa11.08□□□□□ -0.64
NEDD1-213ENST00000557644 TRBV7-9A0A0J9YWB2 115 aa11.07□□□□□ -0.64
NEDD1-213ENST00000557644 C7orf71A4D174 169 aa11.07□□□□□ -0.64
NEDD1-213ENST00000557644 RPL35P42766 123 aaKnown RBP11.07□□□□□ -0.64
NEDD1-213ENST00000557644 TMEM208Q9BTX3 173 aa11.07□□□□□ -0.64
NEDD1-213ENST00000557644 MED9Q9NWA0 146 aa11.07□□□□□ -0.64
NEDD1-213ENST00000557644 X6R8D5 127 aa11.07□□□□□ -0.64
NEDD1-213ENST00000557644 NDFIP1Q9BT67 221 aa11.06□□□□□ -0.64
NEDD1-213ENST00000557644 GOLT1BQ9Y3E0 138 aa11.06□□□□□ -0.64
NEDD1-213ENST00000557644 ZNF324O75467 553 aaPredicted RBP11.06□□□□□ -0.64
NEDD1-213ENST00000557644 ZNF80P51504 273 aaPredicted RBP11.06□□□□□ -0.64
NEDD1-213ENST00000557644 NHLRC2Q8NBF2 726 aa11.06□□□□□ -0.64
NEDD1-213ENST00000557644 FBLL1A6NHQ2 334 aaKnown RBP11.05□□□□□ -0.64
NEDD1-213ENST00000557644 LTAP01374 205 aa11.05□□□□□ -0.64
NEDD1-213ENST00000557644 HTN1P15515 57 aa11.05□□□□□ -0.64
NEDD1-213ENST00000557644 LINC01587Q99440 93 aa11.05□□□□□ -0.64
NEDD1-213ENST00000557644 RAB19A4D1S5 217 aa11.05□□□□□ -0.64
NEDD1-213ENST00000557644 C9JQL5 133 aa11.05□□□□□ -0.64
NEDD1-213ENST00000557644 CEBPGP53567 150 aa11.05□□□□□ -0.64
NEDD1-213ENST00000557644 ZNF705GA8MUZ8 300 aaPredicted RBP11.04□□□□□ -0.64
NEDD1-213ENST00000557644 RGS13O14921 159 aa11.04□□□□□ -0.64
NEDD1-213ENST00000557644 DEFB4AO15263 64 aa11.04□□□□□ -0.64
NEDD1-213ENST00000557644 SAPCD1Q5SSQ6 148 aa11.04□□□□□ -0.64
NEDD1-213ENST00000557644 NIPSNAP3BQ9BS92 247 aa11.04□□□□□ -0.64
NEDD1-213ENST00000557644 TRBV6-1A0A0K0K1D8 114 aa11.04□□□□□ -0.64
NEDD1-213ENST00000557644 GCGP01275 180 aa11.04□□□□□ -0.64
NEDD1-213ENST00000557644 ZFP30Q9Y2G7 519 aa11.04□□□□□ -0.64
NEDD1-213ENST00000557644 TRBV20OR9-2A0A075B6H5 130 aa11.03□□□□□ -0.64
NEDD1-213ENST00000557644 SMUG1Q53HV7 270 aa11.03□□□□□ -0.64
NEDD1-213ENST00000557644 CENPWQ5EE01 88 aa11.03□□□□□ -0.64
NEDD1-213ENST00000557644 BAGE2Q86Y30 109 aa11.03□□□□□ -0.64
NEDD1-213ENST00000557644 ZC2HC1AQ96GY0 325 aa11.03□□□□□ -0.64
NEDD1-213ENST00000557644 TMEM250H0YL14 139 aa11.03□□□□□ -0.64
NEDD1-213ENST00000557644 H7BYZ3 331 aa11.03□□□□□ -0.64
NEDD1-213ENST00000557644 S100A9P06702 114 aaKnown RBP11.03□□□□□ -0.64
NEDD1-213ENST00000557644 SRP19P09132 144 aaKnown RBP11.03□□□□□ -0.64
NEDD1-213ENST00000557644 AZU1P20160 251 aa11.03□□□□□ -0.64
NEDD1-213ENST00000557644 ZNF674Q2M3X9 581 aa11.03□□□□□ -0.64
NEDD1-213ENST00000557644 Q6AWC8 147 aa11.03□□□□□ -0.64
NEDD1-213ENST00000557644 Q8NAQ8 132 aa11.03□□□□□ -0.64
NEDD1-213ENST00000557644 C20orf144Q9BQM9 153 aa11.03□□□□□ -0.64
NEDD1-213ENST00000557644 U3KQK5 164 aa11.03□□□□□ -0.64
NEDD1-213ENST00000557644 IGHV4-28A0A0C4DH34 117 aa11.02□□□□□ -0.65
NEDD1-213ENST00000557644 PGPEP1LA6NFU8 196 aa11.02□□□□□ -0.65
NEDD1-213ENST00000557644 TAS2R60P59551 318 aa11.02□□□□□ -0.65
NEDD1-213ENST00000557644 MUC21Q5SSG8 566 aa11.02□□□□□ -0.65
NEDD1-213ENST00000557644 TMEM256Q8N2U0 113 aa11.02□□□□□ -0.65
NEDD1-213ENST00000557644 PARLQ9H300 379 aa11.02□□□□□ -0.65
NEDD1-213ENST00000557644 CRIP1P50238 77 aa11.02□□□□□ -0.65
NEDD1-213ENST00000557644 TMEM183AQ8IXX5 376 aa11.02□□□□□ -0.65
NEDD1-213ENST00000557644 MLST8Q9BVC4 326 aa11.02□□□□□ -0.65
NEDD1-213ENST00000557644 NEU1Q99519 415 aa11.01□□□□□ -0.65
NEDD1-213ENST00000557644 NAGKQ9UJ70 344 aa11.01□□□□□ -0.65
NEDD1-213ENST00000557644 A0A0J9YWU9 116 aa11.01□□□□□ -0.65
NEDD1-213ENST00000557644 PFN1P07737 140 aaKnown RBP11.01□□□□□ -0.65
NEDD1-213ENST00000557644 MIFP14174 115 aa11.01□□□□□ -0.65
NEDD1-213ENST00000557644 PEA15Q15121 130 aa11.01□□□□□ -0.65
NEDD1-213ENST00000557644 RRN3P1Q2M238 152 aa11.01□□□□□ -0.65
NEDD1-213ENST00000557644 C11orf21Q9P2W6 132 aa11.01□□□□□ -0.65
NEDD1-213ENST00000557644 TP53TG3Q9ULZ0 132 aa11.01□□□□□ -0.65
NEDD1-213ENST00000557644 TRAV21A0A0B4J279 112 aa11□□□□□ -0.65
NEDD1-213ENST00000557644 IGLV2-8P01709 118 aa11□□□□□ -0.65
NEDD1-213ENST00000557644 GNG4P50150 75 aa11□□□□□ -0.65
NEDD1-213ENST00000557644 COX8CQ7Z4L0 72 aa11□□□□□ -0.65
NEDD1-213ENST00000557644 PYGO2Q9BRQ0 406 aa11□□□□□ -0.65
NEDD1-213ENST00000557644 EMP1P54849 157 aa10.99□□□□□ -0.65
NEDD1-213ENST00000557644 SMIM9A6NGZ8 99 aa10.99□□□□□ -0.65
NEDD1-213ENST00000557644 IGHV1OR15-1A0A075B7D0 117 aa10.98□□□□□ -0.65
NEDD1-213ENST00000557644 PRR27Q6MZM9 219 aa10.98□□□□□ -0.65
NEDD1-213ENST00000557644 CBY3A6NI87 242 aa10.98□□□□□ -0.65
NEDD1-213ENST00000557644 SH2D1AO60880 128 aa10.98□□□□□ -0.65
NEDD1-213ENST00000557644 NDUFS6O75380 124 aaKnown RBP10.98□□□□□ -0.65
NEDD1-213ENST00000557644 MGST1P10620 155 aaKnown RBP10.98□□□□□ -0.65
NEDD1-213ENST00000557644 ANXA2RQ3ZCQ2 193 aa10.98□□□□□ -0.65
NEDD1-213ENST00000557644 RNASE8Q8TDE3 154 aaKnown RBP10.98□□□□□ -0.65
NEDD1-213ENST00000557644 FABP5P3A8MUU1 101 aa10.97□□□□□ -0.65
NEDD1-213ENST00000557644 FAM162BQ5T6X4 162 aa10.97□□□□□ -0.65
NEDD1-213ENST00000557644 FAM159AQ6UWV7 190 aa10.97□□□□□ -0.65
NEDD1-213ENST00000557644 SMIM7Q9BQ49 75 aa10.97□□□□□ -0.65
NEDD1-213ENST00000557644 PLAC8L1A1L4L8 177 aa10.97□□□□□ -0.65
NEDD1-213ENST00000557644 EIF4E3Q8N5X7 224 aaKnown RBP10.97□□□□□ -0.65
NEDD1-213ENST00000557644 OCC1Q8TAD7 63 aa10.97□□□□□ -0.65
NEDD1-213ENST00000557644 SMDT1Q9H4I9 107 aa10.97□□□□□ -0.65
NEDD1-213ENST00000557644 ZNF727A8MUV8 499 aa10.96□□□□□ -0.65
NEDD1-213ENST00000557644 GNRH2O43555 120 aa10.96□□□□□ -0.65
NEDD1-213ENST00000557644 OR5I1Q13606 314 aa10.96□□□□□ -0.65
NEDD1-213ENST00000557644 LINC00467Q9BRT7 94 aa10.96□□□□□ -0.65
NEDD1-213ENST00000557644 EDA2RQ9HAV5 297 aa10.96□□□□□ -0.65
NEDD1-213ENST00000557644 IGKV3D-20A0A0C4DH25 116 aa10.96□□□□□ -0.66
NEDD1-213ENST00000557644 C9JCJ5 164 aa10.96□□□□□ -0.66
NEDD1-213ENST00000557644 K7EN84 100 aa10.96□□□□□ -0.66
NEDD1-213ENST00000557644 M0R036 132 aa10.96□□□□□ -0.66
NEDD1-213ENST00000557644 TMEM263Q8WUH6 116 aaKnown RBP10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms