RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 OR10P1Q8NGE3 313 aa1.77□□□□□ -2.13
TRAV28-201ENST00000557548 WFDC5Q8TCV5 224 aa1.77□□□□□ -2.13
TRAV28-201ENST00000557548 ZC2HC1AQ96GY0 325 aa1.77□□□□□ -2.13
TRAV28-201ENST00000557548 ZNF714Q96N38 554 aa1.77□□□□□ -2.13
TRAV28-201ENST00000557548 CIB3Q96Q77 187 aaPredicted RBP1.77□□□□□ -2.13
TRAV28-201ENST00000557548 SDF2Q99470 211 aa1.77□□□□□ -2.13
TRAV28-201ENST00000557548 NAA38Q9BRA0 125 aaKnown RBP1.77□□□□□ -2.13
TRAV28-201ENST00000557548 GINS4Q9BRT9 223 aa1.77□□□□□ -2.13
TRAV28-201ENST00000557548 NPCDR1Q9BY65 106 aa1.77□□□□□ -2.13
TRAV28-201ENST00000557548 C11orf1Q9H5F2 150 aa1.77□□□□□ -2.13
TRAV28-201ENST00000557548 RPRMQ9NS64 109 aa1.77□□□□□ -2.13
TRAV28-201ENST00000557548 TXNL4BQ9NX01 149 aaKnown RBP1.77□□□□□ -2.13
TRAV28-201ENST00000557548 TAS2R8Q9NYW2 309 aa1.77□□□□□ -2.13
TRAV28-201ENST00000557548 METTL1Q9UBP6 276 aaKnown RBP1.77□□□□□ -2.13
TRAV28-201ENST00000557548 EPDR1Q9UM22 224 aa1.77□□□□□ -2.13
TRAV28-201ENST00000557548 IER3IP1Q9Y5U9 82 aa1.77□□□□□ -2.13
TRAV28-201ENST00000557548 R4GN34 69 aa1.77□□□□□ -2.13
TRAV28-201ENST00000557548 MGAMO43451 1857 aa1.77□□□□□ -2.13
TRAV28-201ENST00000557548 EML6Q6ZMW3 1958 aa1.76□□□□□ -2.13
TRAV28-201ENST00000557548 PTPRFP10586 1907 aa1.76□□□□□ -2.13
TRAV28-201ENST00000557548 K7ERJ3 54 aa1.76□□□□□ -2.13
TRAV28-201ENST00000557548 NPYP01303 97 aa1.76□□□□□ -2.13
TRAV28-201ENST00000557548 MT-ND6P03923 174 aa1.76□□□□□ -2.13
TRAV28-201ENST00000557548 IGHV3-30-3P0DP02 117 aa1.76□□□□□ -2.13
TRAV28-201ENST00000557548 PYYP10082 97 aa1.76□□□□□ -2.13
TRAV28-201ENST00000557548 HLA-DRB4P13762 266 aa1.76□□□□□ -2.13
TRAV28-201ENST00000557548 KRTAP13-2Q52LG2 175 aa1.76□□□□□ -2.13
TRAV28-201ENST00000557548 NOXRED1Q6NXP6 359 aa1.76□□□□□ -2.13
TRAV28-201ENST00000557548 ZNF705AQ6ZN79 300 aaPredicted RBP1.76□□□□□ -2.13
TRAV28-201ENST00000557548 C7orf65Q6ZTY9 151 aa1.76□□□□□ -2.13
TRAV28-201ENST00000557548 AAED1Q7RTV5 226 aa1.76□□□□□ -2.13
TRAV28-201ENST00000557548 KCNRGQ8N5I3 272 aa1.76□□□□□ -2.13
TRAV28-201ENST00000557548 SIGLECL1Q8N7X8 197 aa1.76□□□□□ -2.13
TRAV28-201ENST00000557548 OR4B1Q8NGF8 309 aa1.76□□□□□ -2.13
TRAV28-201ENST00000557548 NAA60Q9H7X0 242 aa1.76□□□□□ -2.13
TRAV28-201ENST00000557548 ASF1BQ9NVP2 202 aa1.76□□□□□ -2.13
TRAV28-201ENST00000557548 NOP16Q9Y3C1 178 aaKnown RBP1.76□□□□□ -2.13
TRAV28-201ENST00000557548 HLA-DRB4X5D2U9 266 aa1.76□□□□□ -2.13
TRAV28-201ENST00000557548 PAPPA2Q9BXP8 1791 aa1.76□□□□□ -2.13
TRAV28-201ENST00000557548 COL4A5P29400 1685 aa1.76□□□□□ -2.13
TRAV28-201ENST00000557548 MYH6P13533 1939 aa1.76□□□□□ -2.13
TRAV28-201ENST00000557548 GBF1Q92538 1859 aa1.75□□□□□ -2.13
TRAV28-201ENST00000557548 KIF26AQ9ULI4 1882 aaPredicted RBP1.75□□□□□ -2.13
TRAV28-201ENST00000557548 LRRC37AA6NMS7 1700 aa1.75□□□□□ -2.13
TRAV28-201ENST00000557548 DSCAMO60469 2012 aa1.75□□□□□ -2.13
TRAV28-201ENST00000557548 C17orf51A8MQB3 221 aa1.75□□□□□ -2.13
TRAV28-201ENST00000557548 C3orf84H3BNL1 204 aa1.75□□□□□ -2.13
TRAV28-201ENST00000557548 CCDC179H3BU77 68 aa1.75□□□□□ -2.13
TRAV28-201ENST00000557548 YPEL1O60688 119 aa1.75□□□□□ -2.13
TRAV28-201ENST00000557548 TCL1BO95988 128 aa1.75□□□□□ -2.13
TRAV28-201ENST00000557548 IGHV1-69P01742 117 aa1.75□□□□□ -2.13
TRAV28-201ENST00000557548 IGKV1-16P04430 117 aa1.75□□□□□ -2.13
TRAV28-201ENST00000557548 SLC25A5P05141 298 aaKnown RBP1.75□□□□□ -2.13
TRAV28-201ENST00000557548 CD14P08571 375 aa1.75□□□□□ -2.13
TRAV28-201ENST00000557548 TRGC1P0CF51 173 aa1.75□□□□□ -2.13
TRAV28-201ENST00000557548 CCL3P10147 92 aa1.75□□□□□ -2.13
TRAV28-201ENST00000557548 BRS3P32247 399 aa1.75□□□□□ -2.13
TRAV28-201ENST00000557548 SNRPD3P62318 126 aaKnown RBP1.75□□□□□ -2.13
TRAV28-201ENST00000557548 PABPC1L2AQ5JQF8 200 aa1.75□□□□□ -2.13
TRAV28-201ENST00000557548 LINC01545Q5VT33 79 aa1.75□□□□□ -2.13
TRAV28-201ENST00000557548 MRPL54Q6P161 138 aaKnown RBP1.75□□□□□ -2.13
TRAV28-201ENST00000557548 ZNF322Q6U7Q0 402 aaPredicted RBP1.75□□□□□ -2.13
TRAV28-201ENST00000557548 TMEM91Q6ZNR0 172 aa1.75□□□□□ -2.13
TRAV28-201ENST00000557548 TEN1Q86WV5 123 aa1.75□□□□□ -2.13
TRAV28-201ENST00000557548 SVBPQ8N300 66 aa1.75□□□□□ -2.13
TRAV28-201ENST00000557548 CNEP1R1Q8N9A8 125 aa1.75□□□□□ -2.13
TRAV28-201ENST00000557548 Q8NAQ8 132 aa1.75□□□□□ -2.13
TRAV28-201ENST00000557548 C5orf17Q8NAS9 161 aa1.75□□□□□ -2.13
TRAV28-201ENST00000557548 WFDC11Q8NEX6 87 aa1.75□□□□□ -2.13
TRAV28-201ENST00000557548 UPK3BQ9BT76 320 aa1.75□□□□□ -2.13
TRAV28-201ENST00000557548 TTTY13Q9BZ97 58 aa1.75□□□□□ -2.13
TRAV28-201ENST00000557548 COMMD3Q9UBI1 195 aa1.75□□□□□ -2.13
TRAV28-201ENST00000557548 TRAV12-2A0A075B6T6 113 aa1.74□□□□□ -2.13
TRAV28-201ENST00000557548 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.74□□□□□ -2.13
TRAV28-201ENST00000557548 A0A1B0GU33 70 aa1.74□□□□□ -2.13
TRAV28-201ENST00000557548 C19orf71A6NCJ1 209 aa1.74□□□□□ -2.13
TRAV28-201ENST00000557548 RER1O15258 196 aa1.74□□□□□ -2.13
TRAV28-201ENST00000557548 SYNGR2O43760 224 aa1.74□□□□□ -2.13
TRAV28-201ENST00000557548 LY6HO94772 140 aa1.74□□□□□ -2.13
TRAV28-201ENST00000557548 HBDP02042 147 aa1.74□□□□□ -2.13
TRAV28-201ENST00000557548 PMP2P02689 132 aa1.74□□□□□ -2.13
TRAV28-201ENST00000557548 RBP4P02753 201 aa1.74□□□□□ -2.13
TRAV28-201ENST00000557548 MSMBP08118 114 aa1.74□□□□□ -2.13
TRAV28-201ENST00000557548 SPINK8P0C7L1 97 aa1.74□□□□□ -2.13
TRAV28-201ENST00000557548 IFITM1P13164 125 aa1.74□□□□□ -2.13
TRAV28-201ENST00000557548 ZNF22P17026 224 aaPredicted RBP1.74□□□□□ -2.13
TRAV28-201ENST00000557548 KRTAP10-1P60331 282 aa1.74□□□□□ -2.13
TRAV28-201ENST00000557548 CATR1Q13166 79 aa1.74□□□□□ -2.13
TRAV28-201ENST00000557548 MIAQ16674 131 aa1.74□□□□□ -2.13
TRAV28-201ENST00000557548 FAM229BQ4G0N7 80 aa1.74□□□□□ -2.13
TRAV28-201ENST00000557548 KHDC3LQ587J8 217 aa1.74□□□□□ -2.13
TRAV28-201ENST00000557548 SDIM1Q6ZPB5 146 aa1.74□□□□□ -2.13
TRAV28-201ENST00000557548 TTC9CQ8N5M4 171 aa1.74□□□□□ -2.13
TRAV28-201ENST00000557548 LINC00311Q8N616 119 aa1.74□□□□□ -2.13
TRAV28-201ENST00000557548 CLDND2Q8NHS1 167 aa1.74□□□□□ -2.13
TRAV28-201ENST00000557548 RAB37Q96AX2 223 aa1.74□□□□□ -2.13
TRAV28-201ENST00000557548 DPH3Q96FX2 82 aa1.74□□□□□ -2.13
TRAV28-201ENST00000557548 SAR1AQ9NR31 198 aa1.74□□□□□ -2.13
TRAV28-201ENST00000557548 KCPQ6ZWJ8 1503 aa1.74□□□□□ -2.13
TRAV28-201ENST00000557548 PXDNLA1KZ92 1463 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms