RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 LENEPQ9Y5L5 61 aa10.21□□□□□ -0.78
VIPAS39-208ENST00000556412 KLLNB2CW77 178 aa10.2□□□□□ -0.78
VIPAS39-208ENST00000556412 TMEM183BQ1AE95 376 aa10.2□□□□□ -0.78
VIPAS39-208ENST00000556412 SAPCD1Q5SSQ6 148 aa10.2□□□□□ -0.78
VIPAS39-208ENST00000556412 C11orf52Q96A22 123 aa10.2□□□□□ -0.78
VIPAS39-208ENST00000556412 TRBV7-9A0A0J9YWB2 115 aa10.19□□□□□ -0.78
VIPAS39-208ENST00000556412 RPL35P42766 123 aaKnown RBP10.19□□□□□ -0.78
VIPAS39-208ENST00000556412 CLLU1Q5K131 121 aa10.19□□□□□ -0.78
VIPAS39-208ENST00000556412 NHLRC2Q8NBF2 726 aa10.19□□□□□ -0.78
VIPAS39-208ENST00000556412 KLF12Q9Y4X4 402 aa10.19□□□□□ -0.78
VIPAS39-208ENST00000556412 ZNF705AQ6ZN79 300 aaPredicted RBP10.19□□□□□ -0.78
VIPAS39-208ENST00000556412 Q6ZQT7 251 aa10.19□□□□□ -0.78
VIPAS39-208ENST00000556412 DEFB4AO15263 64 aa10.18□□□□□ -0.78
VIPAS39-208ENST00000556412 PRM2P04554 102 aa10.18□□□□□ -0.78
VIPAS39-208ENST00000556412 S100A9P06702 114 aaKnown RBP10.18□□□□□ -0.78
VIPAS39-208ENST00000556412 ZNF674Q2M3X9 581 aa10.18□□□□□ -0.78
VIPAS39-208ENST00000556412 SMUG1Q53HV7 270 aa10.18□□□□□ -0.78
VIPAS39-208ENST00000556412 BAGE2Q86Y30 109 aa10.18□□□□□ -0.78
VIPAS39-208ENST00000556412 NAGKQ9UJ70 344 aa10.18□□□□□ -0.78
VIPAS39-208ENST00000556412 U3KQK5 164 aa10.18□□□□□ -0.78
VIPAS39-208ENST00000556412 X6R8D5 127 aa10.18□□□□□ -0.78
VIPAS39-208ENST00000556412 AGRNO00468 2067 aa10.17□□□□□ -0.78
VIPAS39-208ENST00000556412 RAB19A4D1S5 217 aa10.17□□□□□ -0.78
VIPAS39-208ENST00000556412 ZNF705GA8MUZ8 300 aaPredicted RBP10.17□□□□□ -0.78
VIPAS39-208ENST00000556412 H7BYZ3 331 aa10.17□□□□□ -0.78
VIPAS39-208ENST00000556412 GCGP01275 180 aa10.17□□□□□ -0.78
VIPAS39-208ENST00000556412 LTAP01374 205 aa10.17□□□□□ -0.78
VIPAS39-208ENST00000556412 TMEM256Q8N2U0 113 aa10.17□□□□□ -0.78
VIPAS39-208ENST00000556412 C20orf144Q9BQM9 153 aa10.17□□□□□ -0.78
VIPAS39-208ENST00000556412 ZFP30Q9Y2G7 519 aa10.17□□□□□ -0.78
VIPAS39-208ENST00000556412 SRSF3P84103 164 aaKnown RBP10.17□□□□□ -0.78
VIPAS39-208ENST00000556412 RRN3P1Q2M238 152 aa10.17□□□□□ -0.78
VIPAS39-208ENST00000556412 CENPWQ5EE01 88 aa10.17□□□□□ -0.78
VIPAS39-208ENST00000556412 MUC21Q5SSG8 566 aa10.17□□□□□ -0.78
VIPAS39-208ENST00000556412 IGHV4-28A0A0C4DH34 117 aa10.16□□□□□ -0.78
VIPAS39-208ENST00000556412 TRBV6-1A0A0K0K1D8 114 aa10.16□□□□□ -0.78
VIPAS39-208ENST00000556412 TMEM250H0YL14 139 aa10.16□□□□□ -0.78
VIPAS39-208ENST00000556412 RGS13O14921 159 aa10.16□□□□□ -0.78
VIPAS39-208ENST00000556412 ZNF324O75467 553 aaPredicted RBP10.16□□□□□ -0.78
VIPAS39-208ENST00000556412 GNG4P50150 75 aa10.16□□□□□ -0.78
VIPAS39-208ENST00000556412 ZNF80P51504 273 aaPredicted RBP10.16□□□□□ -0.78
VIPAS39-208ENST00000556412 EMP1P54849 157 aa10.16□□□□□ -0.78
VIPAS39-208ENST00000556412 PEA15Q15121 130 aa10.16□□□□□ -0.78
VIPAS39-208ENST00000556412 TRAV21A0A0B4J279 112 aa10.15□□□□□ -0.78
VIPAS39-208ENST00000556412 MIFP14174 115 aa10.15□□□□□ -0.78
VIPAS39-208ENST00000556412 TAS2R60P59551 318 aa10.15□□□□□ -0.78
VIPAS39-208ENST00000556412 ZC2HC1AQ96GY0 325 aa10.15□□□□□ -0.78
VIPAS39-208ENST00000556412 PARLQ9H300 379 aa10.15□□□□□ -0.78
VIPAS39-208ENST00000556412 A0A0J9YWU9 116 aa10.14□□□□□ -0.79
VIPAS39-208ENST00000556412 CBY3A6NI87 242 aa10.14□□□□□ -0.79
VIPAS39-208ENST00000556412 SRP19P09132 144 aaKnown RBP10.14□□□□□ -0.79
VIPAS39-208ENST00000556412 MGST1P10620 155 aaKnown RBP10.14□□□□□ -0.79
VIPAS39-208ENST00000556412 Q6AWC8 147 aa10.14□□□□□ -0.79
VIPAS39-208ENST00000556412 PRR27Q6MZM9 219 aa10.14□□□□□ -0.79
VIPAS39-208ENST00000556412 TMEM183AQ8IXX5 376 aa10.14□□□□□ -0.79
VIPAS39-208ENST00000556412 PYGO2Q9BRQ0 406 aa10.14□□□□□ -0.79
VIPAS39-208ENST00000556412 SMIM9A6NGZ8 99 aa10.14□□□□□ -0.79
VIPAS39-208ENST00000556412 PFN1P07737 140 aaKnown RBP10.14□□□□□ -0.79
VIPAS39-208ENST00000556412 AZU1P20160 251 aa10.14□□□□□ -0.79
VIPAS39-208ENST00000556412 FAM159AQ6UWV7 190 aa10.14□□□□□ -0.79
VIPAS39-208ENST00000556412 Q8NAQ8 132 aa10.14□□□□□ -0.79
VIPAS39-208ENST00000556412 NEU1Q99519 415 aa10.14□□□□□ -0.79
VIPAS39-208ENST00000556412 PRKDCP78527 4128 aaKnown RBP10.13□□□□□ -0.79
VIPAS39-208ENST00000556412 NBEAL2Q6ZNJ1 2754 aa10.13□□□□□ -0.79
VIPAS39-208ENST00000556412 IGHV1OR15-1A0A075B7D0 117 aa10.13□□□□□ -0.79
VIPAS39-208ENST00000556412 PGPEP1LA6NFU8 196 aa10.13□□□□□ -0.79
VIPAS39-208ENST00000556412 C9JQL5 133 aa10.13□□□□□ -0.79
VIPAS39-208ENST00000556412 TRBV20OR9-2A0A075B6H5 130 aa10.12□□□□□ -0.79
VIPAS39-208ENST00000556412 FAM162BQ5T6X4 162 aa10.12□□□□□ -0.79
VIPAS39-208ENST00000556412 SMIM7Q9BQ49 75 aa10.12□□□□□ -0.79
VIPAS39-208ENST00000556412 FABP5P3A8MUU1 101 aa10.12□□□□□ -0.79
VIPAS39-208ENST00000556412 SH2D1AO60880 128 aa10.12□□□□□ -0.79
VIPAS39-208ENST00000556412 ANXA2RQ3ZCQ2 193 aa10.12□□□□□ -0.79
VIPAS39-208ENST00000556412 EIF4E3Q8N5X7 224 aaKnown RBP10.12□□□□□ -0.79
VIPAS39-208ENST00000556412 TP53TG3Q9ULZ0 132 aa10.12□□□□□ -0.79
VIPAS39-208ENST00000556412 ZNF727A8MUV8 499 aa10.11□□□□□ -0.79
VIPAS39-208ENST00000556412 M0R036 132 aa10.11□□□□□ -0.79
VIPAS39-208ENST00000556412 ORM1P02763 201 aa10.11□□□□□ -0.79
VIPAS39-208ENST00000556412 CRIP1P50238 77 aa10.11□□□□□ -0.79
VIPAS39-208ENST00000556412 C16orf74Q96GX8 76 aa10.11□□□□□ -0.79
VIPAS39-208ENST00000556412 MLST8Q9BVC4 326 aa10.11□□□□□ -0.79
VIPAS39-208ENST00000556412 COX8CQ7Z4L0 72 aa10.1□□□□□ -0.79
VIPAS39-208ENST00000556412 TMEM263Q8WUH6 116 aaKnown RBP10.1□□□□□ -0.79
VIPAS39-208ENST00000556412 SMDT1Q9H4I9 107 aa10.1□□□□□ -0.79
VIPAS39-208ENST00000556412 C11orf21Q9P2W6 132 aa10.1□□□□□ -0.79
VIPAS39-208ENST00000556412 COMMD7Q86VX2 200 aa10.1□□□□□ -0.79
VIPAS39-208ENST00000556412 RNASE8Q8TDE3 154 aaKnown RBP10.1□□□□□ -0.79
VIPAS39-208ENST00000556412 C11orf68Q9H3H3 251 aaKnown RBP10.1□□□□□ -0.79
VIPAS39-208ENST00000556412 SDF2L1Q9HCN8 221 aa10.1□□□□□ -0.79
VIPAS39-208ENST00000556412 TMSB15BA0A087X1C1 80 aa10.09□□□□□ -0.79
VIPAS39-208ENST00000556412 TMEM189A5PLL7 270 aa10.09□□□□□ -0.79
VIPAS39-208ENST00000556412 C9JCJ5 164 aa10.09□□□□□ -0.79
VIPAS39-208ENST00000556412 GNRH2O43555 120 aa10.09□□□□□ -0.79
VIPAS39-208ENST00000556412 NDUFS6O75380 124 aaKnown RBP10.09□□□□□ -0.79
VIPAS39-208ENST00000556412 IGLV2-8P01709 118 aa10.09□□□□□ -0.79
VIPAS39-208ENST00000556412 OR5I1Q13606 314 aa10.09□□□□□ -0.79
VIPAS39-208ENST00000556412 ZNF493Q6ZR52 646 aa10.09□□□□□ -0.79
VIPAS39-208ENST00000556412 SMIM12Q96EX1 92 aa10.09□□□□□ -0.79
VIPAS39-208ENST00000556412 KCNS1Q96KK3 526 aa10.09□□□□□ -0.79
VIPAS39-208ENST00000556412 LINC00467Q9BRT7 94 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms