RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 ZGRF1Q86YA3 2104 aa11.84□□□□□ -0.51
ARHGEF40-207ENST00000556399 MYMXA0A1B0GTQ4 84 aa11.84□□□□□ -0.51
ARHGEF40-207ENST00000556399 K7EIM0 57 aa11.84□□□□□ -0.51
ARHGEF40-207ENST00000556399 SAA4P35542 130 aa11.84□□□□□ -0.51
ARHGEF40-207ENST00000556399 LINC00322Q6ZN03 302 aaPredicted RBP11.84□□□□□ -0.51
ARHGEF40-207ENST00000556399 H3BMG7 143 aa11.83□□□□□ -0.52
ARHGEF40-207ENST00000556399 C8orf86Q6ZUL3 223 aa11.83□□□□□ -0.52
ARHGEF40-207ENST00000556399 TRAV12-3A0A0B4J271 114 aa11.83□□□□□ -0.52
ARHGEF40-207ENST00000556399 G3V318 75 aa11.83□□□□□ -0.52
ARHGEF40-207ENST00000556399 TSPAN13O95857 204 aa11.83□□□□□ -0.52
ARHGEF40-207ENST00000556399 SLC25A16P16260 332 aa11.83□□□□□ -0.52
ARHGEF40-207ENST00000556399 A0A087WWL8 130 aa11.83□□□□□ -0.52
ARHGEF40-207ENST00000556399 TMEM238C9JI98 176 aa11.83□□□□□ -0.52
ARHGEF40-207ENST00000556399 RRN3P1Q2M238 152 aa11.83□□□□□ -0.52
ARHGEF40-207ENST00000556399 SEM1Q6ZVN7 128 aa11.83□□□□□ -0.52
ARHGEF40-207ENST00000556399 DYNAPQ8N1N2 210 aa11.83□□□□□ -0.52
ARHGEF40-207ENST00000556399 MBD6Q96DN6 1003 aa11.83□□□□□ -0.52
ARHGEF40-207ENST00000556399 Q8N7P7 452 aa11.82□□□□□ -0.52
ARHGEF40-207ENST00000556399 GATA1P15976 413 aaPredicted RBP11.82□□□□□ -0.52
ARHGEF40-207ENST00000556399 AMTNQ6UX39 209 aa11.82□□□□□ -0.52
ARHGEF40-207ENST00000556399 TP73-AS1Q9UF72 201 aa11.82□□□□□ -0.52
ARHGEF40-207ENST00000556399 CREBBPQ92793 2442 aa11.82□□□□□ -0.52
ARHGEF40-207ENST00000556399 F8VRH5 84 aa11.82□□□□□ -0.52
ARHGEF40-207ENST00000556399 FCN3O75636 299 aa11.82□□□□□ -0.52
ARHGEF40-207ENST00000556399 SPINK8P0C7L1 97 aa11.82□□□□□ -0.52
ARHGEF40-207ENST00000556399 IGKV3D-20A0A0C4DH25 116 aa11.82□□□□□ -0.52
ARHGEF40-207ENST00000556399 SMIM2Q9BVW6 85 aa11.82□□□□□ -0.52
ARHGEF40-207ENST00000556399 IGFBPL1Q8WX77 278 aa11.81□□□□□ -0.52
ARHGEF40-207ENST00000556399 MSRB1Q9NZV6 116 aa11.81□□□□□ -0.52
ARHGEF40-207ENST00000556399 BRD3OSQ6XYD6 125 aa11.81□□□□□ -0.52
ARHGEF40-207ENST00000556399 PRSS22Q9GZN4 317 aa11.81□□□□□ -0.52
ARHGEF40-207ENST00000556399 TP53TG1Q9Y2A0 90 aa11.81□□□□□ -0.52
ARHGEF40-207ENST00000556399 IGKV3OR2-268A0A0C4DH90 116 aa11.81□□□□□ -0.52
ARHGEF40-207ENST00000556399 TNRC6AQ8NDV7 1962 aaKnown RBP11.81□□□□□ -0.52
ARHGEF40-207ENST00000556399 TRAV8-4A0A0B4J246 113 aa11.81□□□□□ -0.52
ARHGEF40-207ENST00000556399 FAM223BA6NKX1 122 aa11.81□□□□□ -0.52
ARHGEF40-207ENST00000556399 PF4P02776 101 aa11.81□□□□□ -0.52
ARHGEF40-207ENST00000556399 TAL2Q16559 108 aa11.81□□□□□ -0.52
ARHGEF40-207ENST00000556399 FAM223AQ8IWN6 122 aa11.81□□□□□ -0.52
ARHGEF40-207ENST00000556399 PRADC1Q9BSG0 188 aa11.81□□□□□ -0.52
ARHGEF40-207ENST00000556399 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.8□□□□□ -0.52
ARHGEF40-207ENST00000556399 ZNF688P0C7X2 276 aa11.8□□□□□ -0.52
ARHGEF40-207ENST00000556399 ZNF876PQ49A33 203 aa11.8□□□□□ -0.52
ARHGEF40-207ENST00000556399 ZFAND6Q6FIF0 208 aa11.8□□□□□ -0.52
ARHGEF40-207ENST00000556399 DUSP14O95147 198 aaKnown RBP11.8□□□□□ -0.52
ARHGEF40-207ENST00000556399 HLA-DRB4P13762 266 aa11.8□□□□□ -0.52
ARHGEF40-207ENST00000556399 RHPN1-AS1Q9BWJ2 59 aa11.8□□□□□ -0.52
ARHGEF40-207ENST00000556399 HLA-DRB4X5D2U9 266 aa11.8□□□□□ -0.52
ARHGEF40-207ENST00000556399 TRBV25-1A0A075B6N4 114 aa11.8□□□□□ -0.52
ARHGEF40-207ENST00000556399 A0A087WX48 190 aa11.8□□□□□ -0.52
ARHGEF40-207ENST00000556399 GAGE12HA6NDE8 117 aa11.8□□□□□ -0.52
ARHGEF40-207ENST00000556399 TEX22C9J3V5 150 aa11.8□□□□□ -0.52
ARHGEF40-207ENST00000556399 C12orf74Q32Q52 190 aa11.8□□□□□ -0.52
ARHGEF40-207ENST00000556399 CFHR4Q92496 578 aa11.8□□□□□ -0.52
ARHGEF40-207ENST00000556399 CRYGCP07315 174 aa11.79□□□□□ -0.52
ARHGEF40-207ENST00000556399 C10orf126Q8N4M7 172 aa11.79□□□□□ -0.52
ARHGEF40-207ENST00000556399 LINC00310P59036 64 aa11.79□□□□□ -0.52
ARHGEF40-207ENST00000556399 PLEKHB2Q96CS7 222 aa11.79□□□□□ -0.52
ARHGEF40-207ENST00000556399 SHISA9B4DS77 424 aa11.79□□□□□ -0.52
ARHGEF40-207ENST00000556399 GAGE2BQ13066 116 aa11.79□□□□□ -0.52
ARHGEF40-207ENST00000556399 GAGE2EQ4V326 116 aa11.79□□□□□ -0.52
ARHGEF40-207ENST00000556399 LINC01587Q99440 93 aa11.79□□□□□ -0.52
ARHGEF40-207ENST00000556399 GAGE2DQ9UEU5 116 aa11.79□□□□□ -0.52
ARHGEF40-207ENST00000556399 TRGV11A0A075B6L2 103 aa11.79□□□□□ -0.52
ARHGEF40-207ENST00000556399 DNAL4O96015 105 aa11.78□□□□□ -0.52
ARHGEF40-207ENST00000556399 AZU1P20160 251 aa11.78□□□□□ -0.52
ARHGEF40-207ENST00000556399 MLST8Q9BVC4 326 aa11.78□□□□□ -0.52
ARHGEF40-207ENST00000556399 DOPEY2Q9Y3R5 2298 aa11.78□□□□□ -0.52
ARHGEF40-207ENST00000556399 AGPAT4-IT1Q9H0P7 198 aa11.78□□□□□ -0.52
ARHGEF40-207ENST00000556399 UBE2E1P51965 193 aa11.78□□□□□ -0.52
ARHGEF40-207ENST00000556399 BOD1L2Q8IYS8 172 aa11.78□□□□□ -0.52
ARHGEF40-207ENST00000556399 ITLN2Q8WWU7 325 aaPredicted RBP11.78□□□□□ -0.52
ARHGEF40-207ENST00000556399 TTTY13Q9BZ97 58 aa11.78□□□□□ -0.52
ARHGEF40-207ENST00000556399 NPC2P61916 151 aa11.78□□□□□ -0.52
ARHGEF40-207ENST00000556399 TEX48A0A1B0GUV7 120 aa11.77□□□□□ -0.52
ARHGEF40-207ENST00000556399 NEGR1Q7Z3B1 354 aa11.77□□□□□ -0.52
ARHGEF40-207ENST00000556399 YAE1D1Q9NRH1 226 aa11.77□□□□□ -0.52
ARHGEF40-207ENST00000556399 HCFC1P51610 2035 aa11.77□□□□□ -0.52
ARHGEF40-207ENST00000556399 H3BUX3 64 aa11.77□□□□□ -0.53
ARHGEF40-207ENST00000556399 SP5Q6BEB4 398 aaPredicted RBP11.77□□□□□ -0.53
ARHGEF40-207ENST00000556399 IGHV3-73A0A0B4J1V6 119 aa11.77□□□□□ -0.53
ARHGEF40-207ENST00000556399 C9JAW5 83 aa11.77□□□□□ -0.53
ARHGEF40-207ENST00000556399 M0R2P5 195 aa11.77□□□□□ -0.53
ARHGEF40-207ENST00000556399 ANXA2RQ3ZCQ2 193 aa11.77□□□□□ -0.53
ARHGEF40-207ENST00000556399 USMG5Q96IX5 58 aa11.77□□□□□ -0.53
ARHGEF40-207ENST00000556399 LINC00574Q9H8X3 128 aa11.77□□□□□ -0.53
ARHGEF40-207ENST00000556399 BPESC1Q9GZL8 116 aa11.77□□□□□ -0.53
ARHGEF40-207ENST00000556399 OVOL3O00110 214 aa11.76□□□□□ -0.53
ARHGEF40-207ENST00000556399 FXYD2P54710 66 aa11.76□□□□□ -0.53
ARHGEF40-207ENST00000556399 LOXL1Q08397 574 aaPredicted RBP11.76□□□□□ -0.53
ARHGEF40-207ENST00000556399 PMVKQ15126 192 aa11.76□□□□□ -0.53
ARHGEF40-207ENST00000556399 A0A0U1RRA0 63 aa11.76□□□□□ -0.53
ARHGEF40-207ENST00000556399 FOXE3Q13461 319 aa11.76□□□□□ -0.53
ARHGEF40-207ENST00000556399 OR11H6Q8NGC7 330 aa11.76□□□□□ -0.53
ARHGEF40-207ENST00000556399 ARFGEF3Q5TH69 2177 aa11.75□□□□□ -0.53
ARHGEF40-207ENST00000556399 ATXN8Q156A1 80 aa11.75□□□□□ -0.53
ARHGEF40-207ENST00000556399 C1orf159Q96HA4 380 aa11.75□□□□□ -0.53
ARHGEF40-207ENST00000556399 IGLV11-55A0A075B6I3 123 aa11.75□□□□□ -0.53
ARHGEF40-207ENST00000556399 TRBV6-1A0A0K0K1D8 114 aa11.75□□□□□ -0.53
ARHGEF40-207ENST00000556399 IGLV1-47P01700 117 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms