RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 IGHV3OR16-13A0A075B7E8 117 aa6.28□□□□□ -1.4
ATXN3-235ENST00000556082 IGHV3-74A0A0B4J1X5 117 aa6.28□□□□□ -1.4
ATXN3-235ENST00000556082 A0A1B0GUT8 65 aa6.28□□□□□ -1.4
ATXN3-235ENST00000556082 RAB4BP61018 213 aa6.28□□□□□ -1.4
ATXN3-235ENST00000556082 PAFAH1B2P68402 229 aa6.28□□□□□ -1.4
ATXN3-235ENST00000556082 HIST1H1AQ02539 215 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-235ENST00000556082 SCGB2A2Q13296 93 aa6.28□□□□□ -1.4
ATXN3-235ENST00000556082 TM4SF20Q53R12 229 aa6.28□□□□□ -1.4
ATXN3-235ENST00000556082 RNF182Q8N6D2 247 aa6.28□□□□□ -1.4
ATXN3-235ENST00000556082 PGLYRP4Q96LB8 373 aa6.28□□□□□ -1.4
ATXN3-235ENST00000556082 NRN1Q9NPD7 142 aa6.28□□□□□ -1.4
ATXN3-235ENST00000556082 TP53TG3Q9ULZ0 132 aa6.28□□□□□ -1.4
ATXN3-235ENST00000556082 FABP4P15090 132 aa6.27□□□□□ -1.41
ATXN3-235ENST00000556082 ZNF80P51504 273 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-235ENST00000556082 S100A12P80511 92 aa6.27□□□□□ -1.41
ATXN3-235ENST00000556082 SLAQ13239 276 aa6.27□□□□□ -1.41
ATXN3-235ENST00000556082 TMEM78Q5T7P6 136 aa6.27□□□□□ -1.41
ATXN3-235ENST00000556082 C10orf99Q6UWK7 81 aa6.27□□□□□ -1.41
ATXN3-235ENST00000556082 IL17RELQ6ZVW7 336 aa6.27□□□□□ -1.41
ATXN3-235ENST00000556082 Q71RC1 249 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-235ENST00000556082 TMEM256Q8N2U0 113 aa6.27□□□□□ -1.41
ATXN3-235ENST00000556082 ALKBH7Q9BT30 221 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-235ENST00000556082 TMEM213A2RRL7 107 aa6.26□□□□□ -1.41
ATXN3-235ENST00000556082 IGLC6P0CF74 106 aa6.26□□□□□ -1.41
ATXN3-235ENST00000556082 GZMBP10144 247 aa6.26□□□□□ -1.41
ATXN3-235ENST00000556082 CTRLP40313 264 aa6.26□□□□□ -1.41
ATXN3-235ENST00000556082 ID1P41134 155 aa6.26□□□□□ -1.41
ATXN3-235ENST00000556082 CAMPP49913 170 aa6.26□□□□□ -1.41
ATXN3-235ENST00000556082 ERCC8Q13216 396 aa6.26□□□□□ -1.41
ATXN3-235ENST00000556082 JOSD1Q15040 202 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-235ENST00000556082 PDZD11Q5EBL8 140 aa6.26□□□□□ -1.41
ATXN3-235ENST00000556082 PYY3Q5JQD4 70 aa6.26□□□□□ -1.41
ATXN3-235ENST00000556082 ZNF493Q6ZR52 646 aa6.26□□□□□ -1.41
ATXN3-235ENST00000556082 ZNF575Q86XF7 245 aa6.26□□□□□ -1.41
ATXN3-235ENST00000556082 BAGE3Q86Y29 109 aa6.26□□□□□ -1.41
ATXN3-235ENST00000556082 APRG1Q8IVJ8 170 aa6.26□□□□□ -1.41
ATXN3-235ENST00000556082 KLHDC1Q8N7A1 406 aa6.26□□□□□ -1.41
ATXN3-235ENST00000556082 Q8TAT8 98 aa6.26□□□□□ -1.41
ATXN3-235ENST00000556082 BORCS7Q96B45 105 aa6.26□□□□□ -1.41
ATXN3-235ENST00000556082 FAM19A4Q96LR4 140 aa6.26□□□□□ -1.41
ATXN3-235ENST00000556082 CNFNQ9BYD5 112 aa6.26□□□□□ -1.41
ATXN3-235ENST00000556082 TENM4Q6N022 2769 aa6.26□□□□□ -1.41
ATXN3-235ENST00000556082 DOPEY2Q9Y3R5 2298 aa6.25□□□□□ -1.41
ATXN3-235ENST00000556082 LOC102724200A0A096LPH7 203 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-235ENST00000556082 GRIFINA4D1Z8 144 aa6.25□□□□□ -1.41
ATXN3-235ENST00000556082 DNAJC9-AS1A6NH13 148 aa6.25□□□□□ -1.41
ATXN3-235ENST00000556082 F2Z2F3 143 aa6.25□□□□□ -1.41
ATXN3-235ENST00000556082 NUPR1O60356 82 aa6.25□□□□□ -1.41
ATXN3-235ENST00000556082 SRIP30626 198 aa6.25□□□□□ -1.41
ATXN3-235ENST00000556082 ZNF738Q8NE65 137 aa6.25□□□□□ -1.41
ATXN3-235ENST00000556082 OR10J6PQ8NGY7 276 aa6.25□□□□□ -1.41
ATXN3-235ENST00000556082 C18orf32Q8TCD1 76 aa6.25□□□□□ -1.41
ATXN3-235ENST00000556082 DCANP1Q8TF63 244 aa6.25□□□□□ -1.41
ATXN3-235ENST00000556082 C4orf3Q8WVX3 66 aa6.25□□□□□ -1.41
ATXN3-235ENST00000556082 C16orf95Q9H693 158 aa6.25□□□□□ -1.41
ATXN3-235ENST00000556082 YAE1D1Q9NRH1 226 aa6.25□□□□□ -1.41
ATXN3-235ENST00000556082 HELZ2Q9BYK8 2649 aaKnown RBP6.25□□□□□ -1.41
ATXN3-235ENST00000556082 MAP1AP78559 2803 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-235ENST00000556082 IGHV4OR15-8A0A075B7B6 117 aa6.24□□□□□ -1.41
ATXN3-235ENST00000556082 A0A087WW49 117 aa6.24□□□□□ -1.41
ATXN3-235ENST00000556082 TRAV2A0A0B4J234 112 aa6.24□□□□□ -1.41
ATXN3-235ENST00000556082 SERF1AO75920 110 aa6.24□□□□□ -1.41
ATXN3-235ENST00000556082 GPX1P07203 203 aa6.24□□□□□ -1.41
ATXN3-235ENST00000556082 ARMS2P0C7Q2 107 aa6.24□□□□□ -1.41
ATXN3-235ENST00000556082 HOXD3P31249 432 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-235ENST00000556082 KIAA1644Q3SXP7 199 aa6.24□□□□□ -1.41
ATXN3-235ENST00000556082 LYZL1Q6UWQ5 148 aa6.24□□□□□ -1.41
ATXN3-235ENST00000556082 Q6ZSV7 163 aa6.24□□□□□ -1.41
ATXN3-235ENST00000556082 FER1L6-AS1Q8NA97 138 aa6.24□□□□□ -1.41
ATXN3-235ENST00000556082 OR8A1Q8NGG7 326 aa6.24□□□□□ -1.41
ATXN3-235ENST00000556082 NIT2Q9NQR4 276 aa6.24□□□□□ -1.41
ATXN3-235ENST00000556082 PDZD2O15018 2839 aa6.23□□□□□ -1.41
ATXN3-235ENST00000556082 VPS13CQ709C8 3753 aa6.23□□□□□ -1.41
ATXN3-235ENST00000556082 IGHV4-4A0A075B6R2 117 aa6.23□□□□□ -1.41
ATXN3-235ENST00000556082 IGKV3D-20A0A0C4DH25 116 aa6.23□□□□□ -1.41
ATXN3-235ENST00000556082 A0A1B0GUS0 222 aa6.23□□□□□ -1.41
ATXN3-235ENST00000556082 C2orf70A6NJV1 201 aa6.23□□□□□ -1.41
ATXN3-235ENST00000556082 M0QZ24 198 aa6.23□□□□□ -1.41
ATXN3-235ENST00000556082 ORM1P02763 201 aa6.23□□□□□ -1.41
ATXN3-235ENST00000556082 TCTEX1D4Q5JR98 221 aa6.23□□□□□ -1.41
ATXN3-235ENST00000556082 ZFAND2AQ8N6M9 145 aa6.23□□□□□ -1.41
ATXN3-235ENST00000556082 ODF3Q96PU9 254 aa6.23□□□□□ -1.41
ATXN3-235ENST00000556082 MS4A6AQ9H2W1 248 aa6.23□□□□□ -1.41
ATXN3-235ENST00000556082 U3KQK5 164 aa6.23□□□□□ -1.41
ATXN3-235ENST00000556082 ZANQ9Y493 2812 aa6.22□□□□□ -1.41
ATXN3-235ENST00000556082 ITPR3Q14573 2671 aa6.22□□□□□ -1.41
ATXN3-235ENST00000556082 LINC01619G3V211 115 aa6.22□□□□□ -1.41
ATXN3-235ENST00000556082 K7EQG2 157 aa6.22□□□□□ -1.41
ATXN3-235ENST00000556082 OR5AL1P0C617 328 aa6.22□□□□□ -1.41
ATXN3-235ENST00000556082 PRB4P10163 310 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-235ENST00000556082 SYNJ2BPP57105 145 aa6.22□□□□□ -1.41
ATXN3-235ENST00000556082 FAM104BQ5XKR9 115 aa6.22□□□□□ -1.41
ATXN3-235ENST00000556082 OR1N2Q8NGR9 330 aa6.22□□□□□ -1.41
ATXN3-235ENST00000556082 CHCHD1Q96BP2 118 aaKnown RBP6.22□□□□□ -1.41
ATXN3-235ENST00000556082 KCNS1Q96KK3 526 aa6.22□□□□□ -1.41
ATXN3-235ENST00000556082 DUX5Q96PT3 197 aa6.22□□□□□ -1.41
ATXN3-235ENST00000556082 TMEM191AQ9H0A3 160 aa6.22□□□□□ -1.41
ATXN3-235ENST00000556082 ESM1Q9NQ30 184 aa6.22□□□□□ -1.41
ATXN3-235ENST00000556082 TEX15Q9BXT5 2789 aa6.22□□□□□ -1.41
ATXN3-235ENST00000556082 SVEP1Q4LDE5 3571 aa6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms