RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 NPFFR1Q9GZQ6 430 aa13.79□□□□□ -0.2
RCCD1-204ENST00000555737 TRBV25-1A0A075B6N4 114 aa13.78□□□□□ -0.2
RCCD1-204ENST00000555737 FABP5P3A8MUU1 101 aa13.78□□□□□ -0.2
RCCD1-204ENST00000555737 CLEC19AQ6UXS0 136 aa13.78□□□□□ -0.2
RCCD1-204ENST00000555737 G3V4G9 280 aa13.78□□□□□ -0.2
RCCD1-204ENST00000555737 H3BMG7 143 aa13.78□□□□□ -0.2
RCCD1-204ENST00000555737 ODF1Q14990 250 aa13.78□□□□□ -0.2
RCCD1-204ENST00000555737 SPANXN1Q5VSR9 72 aa13.78□□□□□ -0.2
RCCD1-204ENST00000555737 RNF185Q96GF1 192 aa13.78□□□□□ -0.2
RCCD1-204ENST00000555737 CUBNO60494 3623 aa13.77□□□□□ -0.2
RCCD1-204ENST00000555737 F8W735 103 aaPredicted RBP13.77□□□□□ -0.2
RCCD1-204ENST00000555737 SMIM17P0DL12 118 aa13.77□□□□□ -0.2
RCCD1-204ENST00000555737 C15orf32Q32M92 178 aa13.77□□□□□ -0.2
RCCD1-204ENST00000555737 CFAP161Q6P656 301 aa13.77□□□□□ -0.2
RCCD1-204ENST00000555737 MAPKAPK5-AS1Q8N8E1 139 aa13.77□□□□□ -0.2
RCCD1-204ENST00000555737 RAB1BQ9H0U4 201 aa13.77□□□□□ -0.2
RCCD1-204ENST00000555737 B9A039 149 aa13.77□□□□□ -0.21
RCCD1-204ENST00000555737 CTSGP08311 255 aa13.77□□□□□ -0.21
RCCD1-204ENST00000555737 WFDC2Q14508 124 aa13.77□□□□□ -0.21
RCCD1-204ENST00000555737 ZNF562Q6V9R5 426 aa13.77□□□□□ -0.21
RCCD1-204ENST00000555737 HIST1H4GQ99525 98 aa13.77□□□□□ -0.21
RCCD1-204ENST00000555737 HRNRQ86YZ3 2850 aaPredicted RBP13.77□□□□□ -0.21
RCCD1-204ENST00000555737 IGHV3OR16-10A0A075B7F0 116 aa13.77□□□□□ -0.21
RCCD1-204ENST00000555737 G3V318 75 aa13.77□□□□□ -0.21
RCCD1-204ENST00000555737 M0R381 172 aa13.77□□□□□ -0.21
RCCD1-204ENST00000555737 NCOR2Q9Y618 2525 aa13.76□□□□□ -0.21
RCCD1-204ENST00000555737 IGLV11-55A0A075B6I3 123 aa13.75□□□□□ -0.21
RCCD1-204ENST00000555737 H3BVH4 76 aa13.75□□□□□ -0.21
RCCD1-204ENST00000555737 EMP1P54849 157 aa13.75□□□□□ -0.21
RCCD1-204ENST00000555737 RPL11P62913 178 aaKnown RBP13.75□□□□□ -0.21
RCCD1-204ENST00000555737 SCGB2A2Q13296 93 aa13.75□□□□□ -0.21
RCCD1-204ENST00000555737 ETDBQ3ZM63 59 aa13.75□□□□□ -0.21
RCCD1-204ENST00000555737 C11orf21Q9P2W6 132 aa13.75□□□□□ -0.21
RCCD1-204ENST00000555737 Q8NA96 180 aa13.75□□□□□ -0.21
RCCD1-204ENST00000555737 IGHG4P01861 327 aa13.75□□□□□ -0.21
RCCD1-204ENST00000555737 MYOZ3Q8TDC0 251 aa13.75□□□□□ -0.21
RCCD1-204ENST00000555737 GLMPQ8WWB7 406 aa13.75□□□□□ -0.21
RCCD1-204ENST00000555737 U3KQK5 164 aa13.75□□□□□ -0.21
RCCD1-204ENST00000555737 DPM2O94777 84 aa13.74□□□□□ -0.21
RCCD1-204ENST00000555737 TGFAP01135 160 aa13.74□□□□□ -0.21
RCCD1-204ENST00000555737 CEACAM3P40198 252 aa13.74□□□□□ -0.21
RCCD1-204ENST00000555737 RPS20P60866 119 aaKnown RBP13.74□□□□□ -0.21
RCCD1-204ENST00000555737 HHLA3Q9XRX5 114 aa13.74□□□□□ -0.21
RCCD1-204ENST00000555737 CHD8Q9HCK8 2581 aa13.74□□□□□ -0.21
RCCD1-204ENST00000555737 LINC01548A6NM66 108 aa13.74□□□□□ -0.21
RCCD1-204ENST00000555737 IGF1P05019 195 aa13.74□□□□□ -0.21
RCCD1-204ENST00000555737 PDE6HQ13956 83 aa13.73□□□□□ -0.21
RCCD1-204ENST00000555737 CYSLTR1Q9Y271 337 aa13.73□□□□□ -0.21
RCCD1-204ENST00000555737 SORL1Q92673 2214 aa13.73□□□□□ -0.21
RCCD1-204ENST00000555737 LY6LH3BQJ8 138 aa13.73□□□□□ -0.21
RCCD1-204ENST00000555737 NEGR1Q7Z3B1 354 aa13.73□□□□□ -0.21
RCCD1-204ENST00000555737 IGKV3D-20A0A0C4DH25 116 aa13.73□□□□□ -0.21
RCCD1-204ENST00000555737 IGLC6P0CF74 106 aa13.73□□□□□ -0.21
RCCD1-204ENST00000555737 MGPP08493 103 aa13.72□□□□□ -0.21
RCCD1-204ENST00000555737 AGPAT4-IT1Q9H0P7 198 aa13.72□□□□□ -0.21
RCCD1-204ENST00000555737 TSSC4Q9Y5U2 329 aaPredicted RBP13.72□□□□□ -0.21
RCCD1-204ENST00000555737 CCL21O00585 134 aa13.72□□□□□ -0.21
RCCD1-204ENST00000555737 TRBV6-1A0A0K0K1D8 114 aa13.71□□□□□ -0.21
RCCD1-204ENST00000555737 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.71□□□□□ -0.21
RCCD1-204ENST00000555737 SAMD13Q5VXD3 122 aa13.71□□□□□ -0.21
RCCD1-204ENST00000555737 VMO1Q7Z5L0 202 aa13.71□□□□□ -0.21
RCCD1-204ENST00000555737 ZNF479Q96JC4 524 aa13.71□□□□□ -0.21
RCCD1-204ENST00000555737 PAX8Q06710 450 aa13.71□□□□□ -0.21
RCCD1-204ENST00000555737 TMEM78Q5T7P6 136 aa13.71□□□□□ -0.21
RCCD1-204ENST00000555737 DOPEY2Q9Y3R5 2298 aa13.71□□□□□ -0.21
RCCD1-204ENST00000555737 CDSNQ15517 529 aa13.71□□□□□ -0.22
RCCD1-204ENST00000555737 TMEM219Q86XT9 240 aa13.71□□□□□ -0.22
RCCD1-204ENST00000555737 NXT2Q9NPJ8 142 aaKnown RBP13.71□□□□□ -0.22
RCCD1-204ENST00000555737 OR5A1Q8NGJ0 315 aa13.7□□□□□ -0.22
RCCD1-204ENST00000555737 TIMD4Q96H15 378 aa13.7□□□□□ -0.22
RCCD1-204ENST00000555737 AZU1P20160 251 aa13.7□□□□□ -0.22
RCCD1-204ENST00000555737 S100A4P26447 101 aaKnown RBP13.7□□□□□ -0.22
RCCD1-204ENST00000555737 ZNF575Q86XF7 245 aa13.7□□□□□ -0.22
RCCD1-204ENST00000555737 NDUFS8O00217 210 aa13.69□□□□□ -0.22
RCCD1-204ENST00000555737 INSL3P51460 131 aa13.69□□□□□ -0.22
RCCD1-204ENST00000555737 GATD1Q8NB37 220 aa13.69□□□□□ -0.22
RCCD1-204ENST00000555737 CEND1Q8N111 149 aa13.69□□□□□ -0.22
RCCD1-204ENST00000555737 ATP6V0E1O15342 81 aa13.68□□□□□ -0.22
RCCD1-204ENST00000555737 ZNF502Q8TBZ5 544 aa13.68□□□□□ -0.22
RCCD1-204ENST00000555737 VKORC1Q9BQB6 163 aa13.68□□□□□ -0.22
RCCD1-204ENST00000555737 NOTCH3Q9UM47 2321 aa13.68□□□□□ -0.22
RCCD1-204ENST00000555737 IGHV7-81A0A0B4J1V7 117 aa13.68□□□□□ -0.22
RCCD1-204ENST00000555737 C14orf178Q8N769 122 aaPredicted RBP13.68□□□□□ -0.22
RCCD1-204ENST00000555737 CSPG4Q6UVK1 2322 aa13.68□□□□□ -0.22
RCCD1-204ENST00000555737 LAGE3Q14657 143 aa13.67□□□□□ -0.22
RCCD1-204ENST00000555737 DPF1Q92782 380 aa13.67□□□□□ -0.22
RCCD1-204ENST00000555737 C16orf92Q96LL3 132 aa13.67□□□□□ -0.22
RCCD1-204ENST00000555737 LOC107984156A0A0G2JMH3 177 aa13.67□□□□□ -0.22
RCCD1-204ENST00000555737 SRD5A1P18405 259 aa13.67□□□□□ -0.22
RCCD1-204ENST00000555737 FOXC1Q12948 553 aa13.67□□□□□ -0.22
RCCD1-204ENST00000555737 ARL17AQ8IVW1 177 aa13.67□□□□□ -0.22
RCCD1-204ENST00000555737 RPL39LQ96EH5 51 aaKnown RBP13.67□□□□□ -0.22
RCCD1-204ENST00000555737 SIVA1O15304 175 aa13.67□□□□□ -0.22
RCCD1-204ENST00000555737 ATP5G2Q06055 141 aa13.67□□□□□ -0.22
RCCD1-204ENST00000555737 SCGB1D4Q6XE38 83 aa13.67□□□□□ -0.22
RCCD1-204ENST00000555737 TTC9CQ8N5M4 171 aa13.66□□□□□ -0.22
RCCD1-204ENST00000555737 RNF5Q99942 180 aa13.66□□□□□ -0.22
RCCD1-204ENST00000555737 IGLL5B9A064 214 aa13.65□□□□□ -0.22
RCCD1-204ENST00000555737 SCGB2A1O75556 95 aa13.65□□□□□ -0.22
RCCD1-204ENST00000555737 ZFP36P26651 326 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms