RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 ANKRD20A5PA0PJZ0 165 aa5.89□□□□□ -1.47
PRKCH-218ENST00000555628 C9JCJ5 164 aa5.89□□□□□ -1.47
PRKCH-218ENST00000555628 CTDSPLO15194 276 aa5.89□□□□□ -1.47
PRKCH-218ENST00000555628 ANXA7P20073 488 aaKnown RBP5.89□□□□□ -1.47
PRKCH-218ENST00000555628 RNASE4P34096 147 aaKnown RBP5.89□□□□□ -1.47
PRKCH-218ENST00000555628 RPP30P78346 268 aaKnown RBP5.89□□□□□ -1.47
PRKCH-218ENST00000555628 MRPS10P82664 201 aaKnown RBP5.89□□□□□ -1.47
PRKCH-218ENST00000555628 TDRG1Q3Y452 100 aa5.89□□□□□ -1.47
PRKCH-218ENST00000555628 TMEM14EPQ6UXP3 125 aa5.89□□□□□ -1.47
PRKCH-218ENST00000555628 C9orf47Q6ZRZ4 202 aa5.89□□□□□ -1.47
PRKCH-218ENST00000555628 CLVS1Q8IUQ0 354 aaPredicted RBP5.89□□□□□ -1.47
PRKCH-218ENST00000555628 C15orf40Q8WUR7 153 aa5.89□□□□□ -1.47
PRKCH-218ENST00000555628 PCNPQ8WW12 178 aaKnown RBP5.89□□□□□ -1.47
PRKCH-218ENST00000555628 FUNDC2Q9BWH2 189 aa5.89□□□□□ -1.47
PRKCH-218ENST00000555628 RABL2BQ9UNT1 228 aa5.89□□□□□ -1.47
PRKCH-218ENST00000555628 RNF24Q9Y225 148 aa5.89□□□□□ -1.47
PRKCH-218ENST00000555628 STRAPQ9Y3F4 350 aaKnown RBP5.89□□□□□ -1.47
PRKCH-218ENST00000555628 TRAV4A0A0B4J268 109 aa5.88□□□□□ -1.47
PRKCH-218ENST00000555628 SMCO3A2RU48 225 aa5.88□□□□□ -1.47
PRKCH-218ENST00000555628 RNF222A6NCQ9 220 aa5.88□□□□□ -1.47
PRKCH-218ENST00000555628 GATA1P15976 413 aaPredicted RBP5.88□□□□□ -1.47
PRKCH-218ENST00000555628 RPL37AP61513 92 aaKnown RBP5.88□□□□□ -1.47
PRKCH-218ENST00000555628 CTF1Q16619 201 aa5.88□□□□□ -1.47
PRKCH-218ENST00000555628 GUK1Q16774 197 aa5.88□□□□□ -1.47
PRKCH-218ENST00000555628 SH2D6Q7Z4S9 175 aa5.88□□□□□ -1.47
PRKCH-218ENST00000555628 S100A7AQ86SG5 101 aa5.88□□□□□ -1.47
PRKCH-218ENST00000555628 ZNF546Q86UE3 836 aa5.88□□□□□ -1.47
PRKCH-218ENST00000555628 LINC00477Q96M19 166 aa5.88□□□□□ -1.47
PRKCH-218ENST00000555628 MGST2Q99735 147 aa5.88□□□□□ -1.47
PRKCH-218ENST00000555628 SLC25A31Q9H0C2 315 aa5.88□□□□□ -1.47
PRKCH-218ENST00000555628 TRBV19A0A075B6N1 114 aa5.87□□□□□ -1.47
PRKCH-218ENST00000555628 AGPAT2O15120 278 aa5.87□□□□□ -1.47
PRKCH-218ENST00000555628 IGHV3-30P01768 117 aa5.87□□□□□ -1.47
PRKCH-218ENST00000555628 IGHV3-33P01772 117 aa5.87□□□□□ -1.47
PRKCH-218ENST00000555628 IGHV3-30-3P0DP02 117 aa5.87□□□□□ -1.47
PRKCH-218ENST00000555628 IGHV3-30-5P0DP03 117 aa5.87□□□□□ -1.47
PRKCH-218ENST00000555628 ANXA3P12429 323 aa5.87□□□□□ -1.47
PRKCH-218ENST00000555628 MALP21145 153 aa5.87□□□□□ -1.47
PRKCH-218ENST00000555628 POLR2GP62487 172 aaKnown RBP eCLIP5.87□□□□□ -1.47
PRKCH-218ENST00000555628 ARL16Q0P5N6 197 aa5.87□□□□□ -1.47
PRKCH-218ENST00000555628 ACOT6Q3I5F7 207 aaPredicted RBP5.87□□□□□ -1.47
PRKCH-218ENST00000555628 TM2D2Q9BX73 214 aa5.87□□□□□ -1.47
PRKCH-218ENST00000555628 NPVFQ9HCQ7 196 aa5.87□□□□□ -1.47
PRKCH-218ENST00000555628 FAT4Q6V0I7 4981 aa5.86□□□□□ -1.47
PRKCH-218ENST00000555628 PIGBOS1A0A0B4J2F0 54 aa5.86□□□□□ -1.47
PRKCH-218ENST00000555628 TNFSF8P32971 234 aa5.86□□□□□ -1.47
PRKCH-218ENST00000555628 RRAS2P62070 204 aaPredicted RBP5.86□□□□□ -1.47
PRKCH-218ENST00000555628 VAMP2P63027 116 aa5.86□□□□□ -1.47
PRKCH-218ENST00000555628 TMEM128Q5BJH2 165 aa5.86□□□□□ -1.47
PRKCH-218ENST00000555628 LELP1Q5T871 98 aa5.86□□□□□ -1.47
PRKCH-218ENST00000555628 Q6ZRU5 148 aa5.86□□□□□ -1.47
PRKCH-218ENST00000555628 BAALCQ8WXS3 180 aa5.86□□□□□ -1.47
PRKCH-218ENST00000555628 AP3S1Q92572 193 aa5.86□□□□□ -1.47
PRKCH-218ENST00000555628 SMIM8Q96KF7 97 aa5.86□□□□□ -1.47
PRKCH-218ENST00000555628 SCGB3A2Q96PL1 93 aa5.86□□□□□ -1.47
PRKCH-218ENST00000555628 PAXXQ9BUH6 204 aa5.86□□□□□ -1.47
PRKCH-218ENST00000555628 NAA50Q9GZZ1 169 aaKnown RBP5.86□□□□□ -1.47
PRKCH-218ENST00000555628 Q9H521 79 aa5.86□□□□□ -1.47
PRKCH-218ENST00000555628 IGKV2-40A0A087WW87 121 aaPredicted RBP5.85□□□□□ -1.47
PRKCH-218ENST00000555628 TRBV7-9A0A0J9YWB2 115 aa5.85□□□□□ -1.47
PRKCH-218ENST00000555628 CTDSP2O14595 271 aa5.85□□□□□ -1.47
PRKCH-218ENST00000555628 COX7A2P2O60397 106 aa5.85□□□□□ -1.47
PRKCH-218ENST00000555628 IGKV2D-40P01614 121 aaPredicted RBP5.85□□□□□ -1.47
PRKCH-218ENST00000555628 GPX1P07203 203 aa5.85□□□□□ -1.47
PRKCH-218ENST00000555628 METTL15P1P0C7V9 234 aa5.85□□□□□ -1.47
PRKCH-218ENST00000555628 LINC00694P0DN24 101 aa5.85□□□□□ -1.47
PRKCH-218ENST00000555628 PPT1P50897 306 aa5.85□□□□□ -1.47
PRKCH-218ENST00000555628 C10orf113Q5VZT2 155 aa5.85□□□□□ -1.47
PRKCH-218ENST00000555628 DNAJC30Q96LL9 226 aa5.85□□□□□ -1.47
PRKCH-218ENST00000555628 SPXQ9BT56 116 aa5.85□□□□□ -1.47
PRKCH-218ENST00000555628 DNAJC4Q9NNZ3 241 aa5.85□□□□□ -1.47
PRKCH-218ENST00000555628 ZNF492Q9P255 531 aa5.85□□□□□ -1.47
PRKCH-218ENST00000555628 SCP2D1Q9UJQ7 156 aa5.85□□□□□ -1.47
PRKCH-218ENST00000555628 TRAV8-3A0A0A6YYJ7 113 aa5.84□□□□□ -1.47
PRKCH-218ENST00000555628 TRAV8-6A0A0B4J262 113 aa5.84□□□□□ -1.47
PRKCH-218ENST00000555628 GOSR2O14653 212 aa5.84□□□□□ -1.47
PRKCH-218ENST00000555628 PPP1R1AQ13522 171 aa5.84□□□□□ -1.47
PRKCH-218ENST00000555628 PDE6HQ13956 83 aa5.84□□□□□ -1.47
PRKCH-218ENST00000555628 ZNF266Q14584 549 aa5.84□□□□□ -1.47
PRKCH-218ENST00000555628 OR10J3Q5JRS4 329 aa5.84□□□□□ -1.47
PRKCH-218ENST00000555628 Q6AWC8 147 aa5.84□□□□□ -1.47
PRKCH-218ENST00000555628 EXOC3-AS1Q8N2X6 119 aa5.84□□□□□ -1.47
PRKCH-218ENST00000555628 SLC25A29Q8N8R3 303 aa5.84□□□□□ -1.47
PRKCH-218ENST00000555628 NHLRC2Q8NBF2 726 aa5.84□□□□□ -1.47
PRKCH-218ENST00000555628 Q8TAT8 98 aa5.84□□□□□ -1.47
PRKCH-218ENST00000555628 SOSTQ9BQB4 213 aa5.84□□□□□ -1.47
PRKCH-218ENST00000555628 SRRQ9GZT4 340 aa5.84□□□□□ -1.47
PRKCH-218ENST00000555628 PSENENQ9NZ42 101 aa5.84□□□□□ -1.47
PRKCH-218ENST00000555628 CCDC59Q9P031 241 aaKnown RBP5.84□□□□□ -1.47
PRKCH-218ENST00000555628 TMEM14CQ9P0S9 112 aa5.84□□□□□ -1.47
PRKCH-218ENST00000555628 PRELID1Q9Y255 219 aa5.84□□□□□ -1.47
PRKCH-218ENST00000555628 RBFOX3A6NFN3 312 aa5.83□□□□□ -1.48
PRKCH-218ENST00000555628 PANO1I0J062 215 aa5.83□□□□□ -1.48
PRKCH-218ENST00000555628 SSSCA1O60232 199 aa5.83□□□□□ -1.48
PRKCH-218ENST00000555628 GAS8-AS1O95177 125 aa5.83□□□□□ -1.48
PRKCH-218ENST00000555628 SFT2D2O95562 160 aa5.83□□□□□ -1.48
PRKCH-218ENST00000555628 HOXB5P09067 269 aa5.83□□□□□ -1.48
PRKCH-218ENST00000555628 MUC21Q5SSG8 566 aa5.83□□□□□ -1.48
PRKCH-218ENST00000555628 DAZ4Q86SG3 579 aaKnown RBP5.83□□□□□ -1.48
PRKCH-218ENST00000555628 Q8N976 141 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms