RNA–Protein interactions for RNA: ENST00000555612.5

SYNE2-220, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 6,766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-220ENST00000555612 ORAOV1Q8WV07 137 aa6.49□□□□□ -1.37
SYNE2-220ENST00000555612 C1orf147Q96MC9 270 aaPredicted RBP6.49□□□□□ -1.37
SYNE2-220ENST00000555612 IGLC1P0CG04 106 aa6.48□□□□□ -1.37
SYNE2-220ENST00000555612 NDUFAF3Q9BU61 184 aa6.48□□□□□ -1.37
SYNE2-220ENST00000555612 ZNF114Q8NC26 417 aa6.48□□□□□ -1.37
SYNE2-220ENST00000555612 ZNF479Q96JC4 524 aa6.48□□□□□ -1.37
SYNE2-220ENST00000555612 PRR25Q96S07 402 aa6.48□□□□□ -1.37
SYNE2-220ENST00000555612 UBE2BP63146 152 aa6.48□□□□□ -1.37
SYNE2-220ENST00000555612 KLF5Q13887 457 aaPredicted RBP6.48□□□□□ -1.37
SYNE2-220ENST00000555612 C11orf53Q8IXP5 236 aa6.48□□□□□ -1.37
SYNE2-220ENST00000555612 CHAC1Q9BUX1 264 aa6.48□□□□□ -1.37
SYNE2-220ENST00000555612 A0A1B0GV90 55 aa6.48□□□□□ -1.37
SYNE2-220ENST00000555612 HLA-DRB4P13762 266 aa6.48□□□□□ -1.37
SYNE2-220ENST00000555612 SLAQ13239 276 aa6.48□□□□□ -1.37
SYNE2-220ENST00000555612 U3KQE9 123 aa6.48□□□□□ -1.37
SYNE2-220ENST00000555612 HLA-DRB4X5D2U9 266 aa6.48□□□□□ -1.37
SYNE2-220ENST00000555612 ZC2HC1BQ5TFG8 222 aa6.47□□□□□ -1.37
SYNE2-220ENST00000555612 ESM1Q9NQ30 184 aa6.47□□□□□ -1.37
SYNE2-220ENST00000555612 HLA-DMBP28068 263 aa6.47□□□□□ -1.37
SYNE2-220ENST00000555612 GUSBP1Q15486 140 aa6.47□□□□□ -1.37
SYNE2-220ENST00000555612 RHOHQ15669 191 aa6.47□□□□□ -1.37
SYNE2-220ENST00000555612 C2orf66Q6UXQ4 117 aa6.47□□□□□ -1.37
SYNE2-220ENST00000555612 GFRA4Q9GZZ7 299 aa6.47□□□□□ -1.37
SYNE2-220ENST00000555612 CLPSL1A2RUU4 121 aa6.47□□□□□ -1.37
SYNE2-220ENST00000555612 RPL32P62910 135 aaKnown RBP6.47□□□□□ -1.37
SYNE2-220ENST00000555612 HIST2H2BCQ6DN03 193 aa6.47□□□□□ -1.37
SYNE2-220ENST00000555612 Q8NA96 180 aa6.47□□□□□ -1.37
SYNE2-220ENST00000555612 hDV102S1A0JD36 115 aa6.47□□□□□ -1.37
SYNE2-220ENST00000555612 PRSS46E5RG02 174 aa6.47□□□□□ -1.37
SYNE2-220ENST00000555612 H3BMM0 161 aa6.47□□□□□ -1.37
SYNE2-220ENST00000555612 CCL18P55774 89 aa6.47□□□□□ -1.37
SYNE2-220ENST00000555612 HSD52Q0P140 79 aa6.47□□□□□ -1.37
SYNE2-220ENST00000555612 LYPD6BQ8NI32 183 aa6.47□□□□□ -1.37
SYNE2-220ENST00000555612 UBE2WQ96B02 151 aa6.47□□□□□ -1.37
SYNE2-220ENST00000555612 AJUBAQ96IF1 538 aa6.47□□□□□ -1.37
SYNE2-220ENST00000555612 SNHG12Q9BXW3 62 aa6.46□□□□□ -1.37
SYNE2-220ENST00000555612 SEM1Q6ZVN7 128 aa6.46□□□□□ -1.37
SYNE2-220ENST00000555612 MRPL53Q96EL3 112 aaKnown RBP6.46□□□□□ -1.37
SYNE2-220ENST00000555612 ZNF492Q9P255 531 aa6.46□□□□□ -1.37
SYNE2-220ENST00000555612 KLF12Q9Y4X4 402 aa6.46□□□□□ -1.37
SYNE2-220ENST00000555612 TRAV8-4A0A0B4J246 113 aa6.46□□□□□ -1.38
SYNE2-220ENST00000555612 F8W735 103 aaPredicted RBP6.46□□□□□ -1.38
SYNE2-220ENST00000555612 LYPD6Q86Y78 171 aa6.46□□□□□ -1.38
SYNE2-220ENST00000555612 BCL6BQ8N143 479 aaPredicted RBP6.46□□□□□ -1.38
SYNE2-220ENST00000555612 TMEM256Q8N2U0 113 aa6.46□□□□□ -1.38
SYNE2-220ENST00000555612 NAA38Q9BRA0 125 aaKnown RBP6.46□□□□□ -1.38
SYNE2-220ENST00000555612 IGHV4OR15-8A0A075B7B6 117 aa6.46□□□□□ -1.38
SYNE2-220ENST00000555612 A0A087WW49 117 aa6.46□□□□□ -1.38
SYNE2-220ENST00000555612 IGHV7-81A0A0B4J1V7 117 aa6.46□□□□□ -1.38
SYNE2-220ENST00000555612 HIST3H2BBQ8N257 126 aa6.46□□□□□ -1.38
SYNE2-220ENST00000555612 ZNF491Q8N8L2 437 aa6.46□□□□□ -1.38
SYNE2-220ENST00000555612 TMEM14CQ9P0S9 112 aa6.46□□□□□ -1.38
SYNE2-220ENST00000555612 SPART-AS1P0CW21 52 aa6.46□□□□□ -1.38
SYNE2-220ENST00000555612 C19orf84I3L1E1 186 aa6.45□□□□□ -1.38
SYNE2-220ENST00000555612 WISP2O76076 250 aa6.45□□□□□ -1.38
SYNE2-220ENST00000555612 RNASE13Q5GAN3 156 aaKnown RBP6.45□□□□□ -1.38
SYNE2-220ENST00000555612 C8orf31Q8N9H6 132 aa6.45□□□□□ -1.38
SYNE2-220ENST00000555612 IGHV1-24A0A0C4DH33 117 aa6.45□□□□□ -1.38
SYNE2-220ENST00000555612 ESDP10768 282 aa6.45□□□□□ -1.38
SYNE2-220ENST00000555612 WIPF2Q8TF74 440 aaPredicted RBP6.45□□□□□ -1.38
SYNE2-220ENST00000555612 PCNX2A6NKB5 2137 aa6.45□□□□□ -1.38
SYNE2-220ENST00000555612 CYYR1Q96J86 154 aa6.45□□□□□ -1.38
SYNE2-220ENST00000555612 C17orf77Q96MU5 243 aa6.45□□□□□ -1.38
SYNE2-220ENST00000555612 MED13LQ71F56 2210 aa6.45□□□□□ -1.38
SYNE2-220ENST00000555612 DOCK9Q9BZ29 2069 aa6.45□□□□□ -1.38
SYNE2-220ENST00000555612 ZGRF1Q86YA3 2104 aa6.45□□□□□ -1.38
SYNE2-220ENST00000555612 GBF1Q92538 1859 aa6.45□□□□□ -1.38
SYNE2-220ENST00000555612 TRAV8-3A0A0A6YYJ7 113 aa6.45□□□□□ -1.38
SYNE2-220ENST00000555612 IGLC7A0M8Q6 106 aa6.45□□□□□ -1.38
SYNE2-220ENST00000555612 ATP5G1P05496 136 aa6.45□□□□□ -1.38
SYNE2-220ENST00000555612 XCL1P47992 114 aa6.45□□□□□ -1.38
SYNE2-220ENST00000555612 SMAD5-AS1Q9Y6J3 95 aa6.45□□□□□ -1.38
SYNE2-220ENST00000555612 CUL9Q8IWT3 2517 aa6.45□□□□□ -1.38
SYNE2-220ENST00000555612 DEFB4AO15263 64 aa6.45□□□□□ -1.38
SYNE2-220ENST00000555612 GNRH2O43555 120 aa6.45□□□□□ -1.38
SYNE2-220ENST00000555612 C1orf43Q9BWL3 253 aa6.45□□□□□ -1.38
SYNE2-220ENST00000555612 NOTCH4Q99466 2003 aa6.45□□□□□ -1.38
SYNE2-220ENST00000555612 IGHV3-30P01768 117 aa6.45□□□□□ -1.38
SYNE2-220ENST00000555612 IGHV3-33P01772 117 aa6.45□□□□□ -1.38
SYNE2-220ENST00000555612 IGHV3-30-3P0DP02 117 aa6.45□□□□□ -1.38
SYNE2-220ENST00000555612 IGHV3-30-5P0DP03 117 aa6.45□□□□□ -1.38
SYNE2-220ENST00000555612 HIST1H4AP62805 103 aaKnown RBP6.45□□□□□ -1.38
SYNE2-220ENST00000555612 FAM104BQ5XKR9 115 aa6.45□□□□□ -1.38
SYNE2-220ENST00000555612 TECTAO75443 2155 aa6.44□□□□□ -1.38
SYNE2-220ENST00000555612 TMEM141Q96I45 108 aa6.44□□□□□ -1.38
SYNE2-220ENST00000555612 EDA2RQ9HAV5 297 aa6.44□□□□□ -1.38
SYNE2-220ENST00000555612 DEFB135Q30KP9 77 aa6.44□□□□□ -1.38
SYNE2-220ENST00000555612 PRSS57Q6UWY2 283 aa6.44□□□□□ -1.38
SYNE2-220ENST00000555612 HIST1H2BLQ99880 126 aa6.44□□□□□ -1.38
SYNE2-220ENST00000555612 ATRXP46100 2492 aa6.44□□□□□ -1.38
SYNE2-220ENST00000555612 INAFM1C9JVW0 142 aa6.44□□□□□ -1.38
SYNE2-220ENST00000555612 ASPHD1Q5U4P2 390 aa6.44□□□□□ -1.38
SYNE2-220ENST00000555612 DYNAPQ8N1N2 210 aa6.44□□□□□ -1.38
SYNE2-220ENST00000555612 WFDC11Q8NEX6 87 aa6.44□□□□□ -1.38
SYNE2-220ENST00000555612 SPRY4Q9C004 299 aa6.44□□□□□ -1.38
SYNE2-220ENST00000555612 DNAJC9-AS1A6NH13 148 aa6.44□□□□□ -1.38
SYNE2-220ENST00000555612 MYCNOSP40205 109 aa6.44□□□□□ -1.38
SYNE2-220ENST00000555612 SAMD5Q5TGI4 173 aa6.44□□□□□ -1.38
SYNE2-220ENST00000555612 Q8N8P6 123 aa6.44□□□□□ -1.38
SYNE2-220ENST00000555612 RITA1Q96K30 269 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms