RNA–Protein interactions for RNA: ENST00000555518.5

LINC00643-203, long intergenic non-protein coding RNA 643, humanhuman

TSL 4

Gene LINC00643, Length 552 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-203ENST00000555518 LTAP01374 205 aa4.68□□□□□ -1.66
LINC00643-203ENST00000555518 IGKV2D-40P01614 121 aaPredicted RBP4.68□□□□□ -1.66
LINC00643-203ENST00000555518 BMI1P35226 326 aa4.68□□□□□ -1.66
LINC00643-203ENST00000555518 AKR1C3P42330 323 aa4.68□□□□□ -1.66
LINC00643-203ENST00000555518 TAS2R60P59551 318 aa4.68□□□□□ -1.66
LINC00643-203ENST00000555518 PSG3Q16557 428 aa4.68□□□□□ -1.66
LINC00643-203ENST00000555518 DEFB114Q30KQ6 69 aa4.68□□□□□ -1.66
LINC00643-203ENST00000555518 ANXA2RQ3ZCQ2 193 aa4.68□□□□□ -1.66
LINC00643-203ENST00000555518 CENPWQ5EE01 88 aa4.68□□□□□ -1.66
LINC00643-203ENST00000555518 GOLT1AQ6ZVE7 132 aa4.68□□□□□ -1.66
LINC00643-203ENST00000555518 Q86TA4 180 aa4.68□□□□□ -1.66
LINC00643-203ENST00000555518 LINC01551Q86U37 167 aa4.68□□□□□ -1.66
LINC00643-203ENST00000555518 TMEM61Q8N0U2 210 aa4.68□□□□□ -1.66
LINC00643-203ENST00000555518 SVBPQ8N300 66 aa4.68□□□□□ -1.66
LINC00643-203ENST00000555518 TMEM75Q8N9X5 138 aa4.68□□□□□ -1.66
LINC00643-203ENST00000555518 VGLL1Q99990 258 aa4.68□□□□□ -1.66
LINC00643-203ENST00000555518 MS4A6AQ9H2W1 248 aa4.68□□□□□ -1.66
LINC00643-203ENST00000555518 PEMTQ9UBM1 199 aa4.68□□□□□ -1.66
LINC00643-203ENST00000555518 NAT8Q9UHE5 227 aa4.68□□□□□ -1.66
LINC00643-203ENST00000555518 RPH3ALQ9UNE2 315 aa4.68□□□□□ -1.66
LINC00643-203ENST00000555518 LY96Q9Y6Y9 160 aa4.68□□□□□ -1.66
LINC00643-203ENST00000555518 TRAV2A0A0B4J234 112 aa4.67□□□□□ -1.66
LINC00643-203ENST00000555518 RBAKDNA6NC62 111 aa4.67□□□□□ -1.66
LINC00643-203ENST00000555518 IZUMO1RA6ND01 250 aa4.67□□□□□ -1.66
LINC00643-203ENST00000555518 TSPAN4O14817 238 aa4.67□□□□□ -1.66
LINC00643-203ENST00000555518 CNN1P51911 297 aaKnown RBP4.67□□□□□ -1.66
LINC00643-203ENST00000555518 DEFB1P60022 68 aa4.67□□□□□ -1.66
LINC00643-203ENST00000555518 TMEM241Q24JQ0 296 aa4.67□□□□□ -1.66
LINC00643-203ENST00000555518 LCN12Q6JVE5 192 aa4.67□□□□□ -1.66
LINC00643-203ENST00000555518 COX8CQ7Z4L0 72 aa4.67□□□□□ -1.66
LINC00643-203ENST00000555518 GBGT1Q8N5D6 347 aa4.67□□□□□ -1.66
LINC00643-203ENST00000555518 OCC1Q8TAD7 63 aa4.67□□□□□ -1.66
LINC00643-203ENST00000555518 ISOC2Q96AB3 205 aa4.67□□□□□ -1.66
LINC00643-203ENST00000555518 TVP23CQ96ET8 276 aa4.67□□□□□ -1.66
LINC00643-203ENST00000555518 FMC1Q96HJ9 113 aa4.67□□□□□ -1.66
LINC00643-203ENST00000555518 SGK494Q96LW2 274 aa4.67□□□□□ -1.66
LINC00643-203ENST00000555518 NIPSNAP3BQ9BS92 247 aa4.67□□□□□ -1.66
LINC00643-203ENST00000555518 GPR61Q9BZJ8 451 aa4.67□□□□□ -1.66
LINC00643-203ENST00000555518 AAMDCQ9H7C9 122 aa4.67□□□□□ -1.66
LINC00643-203ENST00000555518 PRELID1Q9Y255 219 aa4.67□□□□□ -1.66
LINC00643-203ENST00000555518 IGKV3-7A0A075B6H7 116 aa4.66□□□□□ -1.66
LINC00643-203ENST00000555518 SERTM2A0A1B0GWG4 89 aa4.66□□□□□ -1.66
LINC00643-203ENST00000555518 C7orf77A4D0Y5 90 aa4.66□□□□□ -1.66
LINC00643-203ENST00000555518 M0QZ24 198 aa4.66□□□□□ -1.66
LINC00643-203ENST00000555518 DNASE2O00115 360 aaPredicted RBP4.66□□□□□ -1.66
LINC00643-203ENST00000555518 SNAPINO95295 136 aa4.66□□□□□ -1.66
LINC00643-203ENST00000555518 GCGP01275 180 aa4.66□□□□□ -1.66
LINC00643-203ENST00000555518 IGLV1-51P01701 117 aa4.66□□□□□ -1.66
LINC00643-203ENST00000555518 S100A9P06702 114 aaKnown RBP4.66□□□□□ -1.66
LINC00643-203ENST00000555518 GNG4P50150 75 aa4.66□□□□□ -1.66
LINC00643-203ENST00000555518 FLI1Q01543 452 aaPredicted RBP4.66□□□□□ -1.66
LINC00643-203ENST00000555518 PNRC1Q12796 327 aaPredicted RBP4.66□□□□□ -1.66
LINC00643-203ENST00000555518 ERCC8Q13216 396 aa4.66□□□□□ -1.66
LINC00643-203ENST00000555518 OR5I1Q13606 314 aa4.66□□□□□ -1.66
LINC00643-203ENST00000555518 ADIRFQ15847 76 aa4.66□□□□□ -1.66
LINC00643-203ENST00000555518 LINC00322Q6ZN03 302 aaPredicted RBP4.66□□□□□ -1.66
LINC00643-203ENST00000555518 NHLRC2Q8NBF2 726 aa4.66□□□□□ -1.66
LINC00643-203ENST00000555518 CMTM2Q8TAZ6 248 aa4.66□□□□□ -1.66
LINC00643-203ENST00000555518 FAM19A4Q96LR4 140 aa4.66□□□□□ -1.66
LINC00643-203ENST00000555518 YPEL4Q96NS1 127 aa4.66□□□□□ -1.66
LINC00643-203ENST00000555518 ASCL2Q99929 193 aa4.66□□□□□ -1.66
LINC00643-203ENST00000555518 PPP1R14DQ9NXH3 145 aa4.66□□□□□ -1.66
LINC00643-203ENST00000555518 CLEC5AQ9NY25 188 aa4.66□□□□□ -1.66
LINC00643-203ENST00000555518 PSG8Q9UQ74 426 aa4.66□□□□□ -1.66
LINC00643-203ENST00000555518 ZNF256Q9Y2P7 627 aaPredicted RBP4.66□□□□□ -1.66
LINC00643-203ENST00000555518 AGRNO00468 2067 aa4.65□□□□□ -1.66
LINC00643-203ENST00000555518 A0A087WWC5 75 aa4.65□□□□□ -1.67
LINC00643-203ENST00000555518 TRAV25A0A0B4J276 109 aa4.65□□□□□ -1.67
LINC00643-203ENST00000555518 C19orf71A6NCJ1 209 aa4.65□□□□□ -1.67
LINC00643-203ENST00000555518 A8MTW9 85 aa4.65□□□□□ -1.67
LINC00643-203ENST00000555518 F6UB75 175 aa4.65□□□□□ -1.67
LINC00643-203ENST00000555518 M0R036 132 aa4.65□□□□□ -1.67
LINC00643-203ENST00000555518 ZNF688P0C7X2 276 aa4.65□□□□□ -1.67
LINC00643-203ENST00000555518 ZNF705DP0CH99 300 aaPredicted RBP4.65□□□□□ -1.67
LINC00643-203ENST00000555518 ZNF705BP0CI00 300 aaPredicted RBP4.65□□□□□ -1.67
LINC00643-203ENST00000555518 CSN1S1P47710 185 aa4.65□□□□□ -1.67
LINC00643-203ENST00000555518 TFPI2P48307 235 aa4.65□□□□□ -1.67
LINC00643-203ENST00000555518 UBE2G1P62253 170 aa4.65□□□□□ -1.67
LINC00643-203ENST00000555518 RHEBQ15382 184 aa4.65□□□□□ -1.67
LINC00643-203ENST00000555518 ODF3L2Q3SX64 289 aa4.65□□□□□ -1.67
LINC00643-203ENST00000555518 RNF212Q495C1 297 aa4.65□□□□□ -1.67
LINC00643-203ENST00000555518 GDF5OSQ5U4N7 250 aa4.65□□□□□ -1.67
LINC00643-203ENST00000555518 SAMD13Q5VXD3 122 aa4.65□□□□□ -1.67
LINC00643-203ENST00000555518 PRNTQ86SH4 94 aa4.65□□□□□ -1.67
LINC00643-203ENST00000555518 BAGE2Q86Y30 109 aa4.65□□□□□ -1.67
LINC00643-203ENST00000555518 CBLN2Q8IUK8 224 aa4.65□□□□□ -1.67
LINC00643-203ENST00000555518 TMEM183AQ8IXX5 376 aa4.65□□□□□ -1.67
LINC00643-203ENST00000555518 OR8A1Q8NGG7 326 aa4.65□□□□□ -1.67
LINC00643-203ENST00000555518 Q8TAT8 98 aa4.65□□□□□ -1.67
LINC00643-203ENST00000555518 DYNLRB2Q8TF09 96 aa4.65□□□□□ -1.67
LINC00643-203ENST00000555518 SMIM12Q96EX1 92 aa4.65□□□□□ -1.67
LINC00643-203ENST00000555518 ZC2HC1AQ96GY0 325 aa4.65□□□□□ -1.67
LINC00643-203ENST00000555518 SPAG8Q99932 426 aaPredicted RBP4.65□□□□□ -1.67
LINC00643-203ENST00000555518 AGPAT4-IT1Q9H0P7 198 aa4.65□□□□□ -1.67
LINC00643-203ENST00000555518 A0A0J9YX75 114 aa4.64□□□□□ -1.67
LINC00643-203ENST00000555518 B4DEV8 164 aa4.64□□□□□ -1.67
LINC00643-203ENST00000555518 SAP30O75446 220 aa4.64□□□□□ -1.67
LINC00643-203ENST00000555518 CT45A10P0DMU9 189 aa4.64□□□□□ -1.67
LINC00643-203ENST00000555518 ID1P41134 155 aa4.64□□□□□ -1.67
LINC00643-203ENST00000555518 CRIP1P50238 77 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms