RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 C10orf99Q6UWK7 81 aa18.49■□□□□ 0.55
TMEM260-207ENST00000555497 LINC00173Q6ZV60 143 aa18.49■□□□□ 0.55
TMEM260-207ENST00000555497 SPATA12Q7Z6I5 190 aa18.49■□□□□ 0.55
TMEM260-207ENST00000555497 NPFFR1Q9GZQ6 430 aa18.49■□□□□ 0.55
TMEM260-207ENST00000555497 Q6ZQT7 251 aa18.49■□□□□ 0.55
TMEM260-207ENST00000555497 C9orf47Q6ZRZ4 202 aa18.49■□□□□ 0.55
TMEM260-207ENST00000555497 A0A0G2JLM5 398 aa18.48■□□□□ 0.55
TMEM260-207ENST00000555497 IGHV4-31P0DP07 118 aa18.48■□□□□ 0.55
TMEM260-207ENST00000555497 LINC01559Q495D7 138 aa18.48■□□□□ 0.55
TMEM260-207ENST00000555497 TMEM78Q5T7P6 136 aa18.48■□□□□ 0.55
TMEM260-207ENST00000555497 FAM104BQ5XKR9 115 aa18.48■□□□□ 0.55
TMEM260-207ENST00000555497 NPSP0C0P6 89 aa18.47■□□□□ 0.55
TMEM260-207ENST00000555497 MSRB1Q9NZV6 116 aa18.47■□□□□ 0.55
TMEM260-207ENST00000555497 SELENOKQ9Y6D0 94 aa18.47■□□□□ 0.55
TMEM260-207ENST00000555497 IGKV3D-20A0A0C4DH25 116 aa18.47■□□□□ 0.55
TMEM260-207ENST00000555497 SOCS3O14543 225 aa18.47■□□□□ 0.55
TMEM260-207ENST00000555497 TM4SF20Q53R12 229 aa18.47■□□□□ 0.55
TMEM260-207ENST00000555497 C9orf139Q6ZV77 190 aa18.46■□□□□ 0.55
TMEM260-207ENST00000555497 ATOH7Q8N100 152 aa18.46■□□□□ 0.55
TMEM260-207ENST00000555497 D6R8Y8 96 aa18.46■□□□□ 0.55
TMEM260-207ENST00000555497 EDN2P20800 178 aa18.46■□□□□ 0.55
TMEM260-207ENST00000555497 DEFB1P60022 68 aa18.46■□□□□ 0.55
TMEM260-207ENST00000555497 TWIST1Q15672 202 aa18.46■□□□□ 0.55
TMEM260-207ENST00000555497 U3KQK5 164 aa18.46■□□□□ 0.55
TMEM260-207ENST00000555497 FSHBP01225 129 aa18.45■□□□□ 0.54
TMEM260-207ENST00000555497 PSMB8P28062 276 aa18.45■□□□□ 0.54
TMEM260-207ENST00000555497 ZNF580Q9UK33 172 aa18.45■□□□□ 0.54
TMEM260-207ENST00000555497 NAV2Q8IVL1 2488 aa18.45■□□□□ 0.54
TMEM260-207ENST00000555497 MRPL51Q4U2R6 128 aaKnown RBP18.45■□□□□ 0.54
TMEM260-207ENST00000555497 ZNF738Q8NE65 137 aa18.45■□□□□ 0.54
TMEM260-207ENST00000555497 DEFB113Q30KQ7 82 aa18.44■□□□□ 0.54
TMEM260-207ENST00000555497 FOXE3Q13461 319 aa18.43■□□□□ 0.54
TMEM260-207ENST00000555497 MAJINQ3KP22 176 aa18.43■□□□□ 0.54
TMEM260-207ENST00000555497 RHPN1-AS1Q9BWJ2 59 aa18.43■□□□□ 0.54
TMEM260-207ENST00000555497 MXRA5Q9NR99 2828 aa18.43■□□□□ 0.54
TMEM260-207ENST00000555497 IGHV7-4-1A0A0J9YVY3 117 aa18.43■□□□□ 0.54
TMEM260-207ENST00000555497 HIST1H1AQ02539 215 aaPredicted RBP18.43■□□□□ 0.54
TMEM260-207ENST00000555497 PRR9Q5T870 116 aa18.43■□□□□ 0.54
TMEM260-207ENST00000555497 CNFNQ9BYD5 112 aa18.43■□□□□ 0.54
TMEM260-207ENST00000555497 PEF1Q9UBV8 284 aaKnown RBP18.43■□□□□ 0.54
TMEM260-207ENST00000555497 DOPEY2Q9Y3R5 2298 aa18.43■□□□□ 0.54
TMEM260-207ENST00000555497 BATFQ16520 125 aa18.42■□□□□ 0.54
TMEM260-207ENST00000555497 SPATA45Q537H7 98 aa18.42■□□□□ 0.54
TMEM260-207ENST00000555497 IGKV3-7A0A075B6H7 116 aa18.42■□□□□ 0.54
TMEM260-207ENST00000555497 FAM106AQ4KMX7 169 aa18.42■□□□□ 0.54
TMEM260-207ENST00000555497 Q5PR19 223 aa18.42■□□□□ 0.54
TMEM260-207ENST00000555497 COL5A1-AS1Q5SY13 56 aa18.42■□□□□ 0.54
TMEM260-207ENST00000555497 LEPROTL1O95214 131 aa18.41■□□□□ 0.54
TMEM260-207ENST00000555497 RPL11P62913 178 aaKnown RBP18.41■□□□□ 0.54
TMEM260-207ENST00000555497 PRELID3AQ96N28 172 aa18.41■□□□□ 0.54
TMEM260-207ENST00000555497 TMEM70Q9BUB7 260 aa18.41■□□□□ 0.54
TMEM260-207ENST00000555497 SMKR1H3BMG3 65 aa18.41■□□□□ 0.54
TMEM260-207ENST00000555497 IFI27P40305 119 aaPredicted RBP18.41■□□□□ 0.54
TMEM260-207ENST00000555497 DAZ1Q9NQZ3 744 aaKnown RBP18.41■□□□□ 0.54
TMEM260-207ENST00000555497 BEX4Q9NWD9 120 aaPredicted RBP18.41■□□□□ 0.54
TMEM260-207ENST00000555497 TEX15Q9BXT5 2789 aa18.4■□□□□ 0.54
TMEM260-207ENST00000555497 DMRTA1Q5VZB9 504 aa18.39■□□□□ 0.54
TMEM260-207ENST00000555497 ORMDL3Q8N138 153 aa18.39■□□□□ 0.54
TMEM260-207ENST00000555497 PRSS3P2Q8NHM4 247 aa18.39■□□□□ 0.54
TMEM260-207ENST00000555497 RNF185Q96GF1 192 aa18.39■□□□□ 0.54
TMEM260-207ENST00000555497 SMPXQ9UHP9 88 aa18.39■□□□□ 0.54
TMEM260-207ENST00000555497 LOC389332A0A1B0GUA5 103 aa18.39■□□□□ 0.53
TMEM260-207ENST00000555497 Q6YL49 198 aa18.39■□□□□ 0.53
TMEM260-207ENST00000555497 TMEM191AQ9H0A3 160 aa18.39■□□□□ 0.53
TMEM260-207ENST00000555497 AP5S1Q9NUS5 200 aa18.39■□□□□ 0.53
TMEM260-207ENST00000555497 SIGLEC8Q9NYZ4 499 aa18.39■□□□□ 0.53
TMEM260-207ENST00000555497 PRRC2AP48634 2157 aaKnown RBP18.38■□□□□ 0.53
TMEM260-207ENST00000555497 SRD5A1P18405 259 aa18.38■□□□□ 0.53
TMEM260-207ENST00000555497 VPREB3Q9UKI3 123 aa18.38■□□□□ 0.53
TMEM260-207ENST00000555497 CRXO43186 299 aaPredicted RBP18.38■□□□□ 0.53
TMEM260-207ENST00000555497 UQCR10Q9UDW1 63 aa18.38■□□□□ 0.53
TMEM260-207ENST00000555497 APCP25054 2843 aa18.38■□□□□ 0.53
TMEM260-207ENST00000555497 F6UB75 175 aa18.37■□□□□ 0.53
TMEM260-207ENST00000555497 SYS1-DBNDD2H3BUS1 97 aa18.37■□□□□ 0.53
TMEM260-207ENST00000555497 NCR2O95944 276 aa18.37■□□□□ 0.53
TMEM260-207ENST00000555497 OR5AL1P0C617 328 aa18.37■□□□□ 0.53
TMEM260-207ENST00000555497 FA2HQ7L5A8 372 aa18.37■□□□□ 0.53
TMEM260-207ENST00000555497 J3KRW8 73 aa18.37■□□□□ 0.53
TMEM260-207ENST00000555497 GAS8-AS1O95177 125 aa18.37■□□□□ 0.53
TMEM260-207ENST00000555497 ZFAND2AQ8N6M9 145 aa18.37■□□□□ 0.53
TMEM260-207ENST00000555497 Q96MF0 132 aa18.37■□□□□ 0.53
TMEM260-207ENST00000555497 NPYP01303 97 aa18.36■□□□□ 0.53
TMEM260-207ENST00000555497 TFPI2P48307 235 aa18.36■□□□□ 0.53
TMEM260-207ENST00000555497 KRTAP1-3Q8IUG1 177 aa18.36■□□□□ 0.53
TMEM260-207ENST00000555497 LINC00477Q96M19 166 aa18.36■□□□□ 0.53
TMEM260-207ENST00000555497 TIMM8BQ9Y5J9 83 aaPredicted RBP18.36■□□□□ 0.53
TMEM260-207ENST00000555497 OVOL1O14753 267 aa18.35■□□□□ 0.53
TMEM260-207ENST00000555497 IGLC3P0DOY3 106 aa18.35■□□□□ 0.53
TMEM260-207ENST00000555497 CKS2P33552 79 aa18.35■□□□□ 0.53
TMEM260-207ENST00000555497 LRRC75A-AS1Q8N1F1 130 aa18.35■□□□□ 0.53
TMEM260-207ENST00000555497 OR10J6PQ8NGY7 276 aa18.35■□□□□ 0.53
TMEM260-207ENST00000555497 LENEPQ9Y5L5 61 aa18.35■□□□□ 0.53
TMEM260-207ENST00000555497 CREBBPQ92793 2442 aa18.35■□□□□ 0.53
TMEM260-207ENST00000555497 A0A096LNJ9 63 aa18.35■□□□□ 0.53
TMEM260-207ENST00000555497 K7EMT4 169 aa18.35■□□□□ 0.53
TMEM260-207ENST00000555497 OR10AG1Q8NH19 301 aa18.35■□□□□ 0.53
TMEM260-207ENST00000555497 ZNF702PQ9H963 129 aa18.35■□□□□ 0.53
TMEM260-207ENST00000555497 HOXA3O43365 443 aaPredicted RBP18.34■□□□□ 0.53
TMEM260-207ENST00000555497 PRSS57Q6UWY2 283 aa18.34■□□□□ 0.53
TMEM260-207ENST00000555497 MCRIP2Q9BUT9 160 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms