RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 CA1P00915 261 aaPredicted RBP8.5□□□□□ -1.05
SHMT2-216ENST00000554975 ZNF705DP0CH99 300 aaPredicted RBP8.5□□□□□ -1.05
SHMT2-216ENST00000554975 ZNF705BP0CI00 300 aaPredicted RBP8.5□□□□□ -1.05
SHMT2-216ENST00000554975 PMCHP20382 165 aa8.5□□□□□ -1.05
SHMT2-216ENST00000554975 SLC35B1P78383 322 aa8.5□□□□□ -1.05
SHMT2-216ENST00000554975 ECSCRQ19T08 205 aa8.5□□□□□ -1.05
SHMT2-216ENST00000554975 FAM209BQ5JX69 171 aa8.5□□□□□ -1.05
SHMT2-216ENST00000554975 COX8CQ7Z4L0 72 aa8.5□□□□□ -1.05
SHMT2-216ENST00000554975 GATD1Q8NB37 220 aa8.5□□□□□ -1.05
SHMT2-216ENST00000554975 C18orf32Q8TCD1 76 aa8.5□□□□□ -1.05
SHMT2-216ENST00000554975 MRPL53Q96EL3 112 aaKnown RBP8.5□□□□□ -1.05
SHMT2-216ENST00000554975 HSPB9Q9BQS6 159 aa8.5□□□□□ -1.05
SHMT2-216ENST00000554975 NDUFAF3Q9BU61 184 aa8.5□□□□□ -1.05
SHMT2-216ENST00000554975 TP53TG3Q9ULZ0 132 aa8.5□□□□□ -1.05
SHMT2-216ENST00000554975 A0A1B0GUT8 65 aa8.49□□□□□ -1.05
SHMT2-216ENST00000554975 F8W735 103 aaPredicted RBP8.49□□□□□ -1.05
SHMT2-216ENST00000554975 BRI3O95415 125 aa8.49□□□□□ -1.05
SHMT2-216ENST00000554975 IGLV2-11P01706 119 aa8.49□□□□□ -1.05
SHMT2-216ENST00000554975 FOXA3P55318 350 aaPredicted RBP8.49□□□□□ -1.05
SHMT2-216ENST00000554975 LINC00310P59036 64 aa8.49□□□□□ -1.05
SHMT2-216ENST00000554975 RHOGP84095 191 aa8.49□□□□□ -1.05
SHMT2-216ENST00000554975 SLAQ13239 276 aa8.49□□□□□ -1.05
SHMT2-216ENST00000554975 KHDC1LQ5JSQ8 128 aa8.49□□□□□ -1.05
SHMT2-216ENST00000554975 CDPF1Q6NVV7 123 aa8.49□□□□□ -1.05
SHMT2-216ENST00000554975 TEX43Q6ZNM6 134 aa8.49□□□□□ -1.05
SHMT2-216ENST00000554975 EXOC3-AS1Q8N2X6 119 aa8.49□□□□□ -1.05
SHMT2-216ENST00000554975 C5orf56Q8N8D9 126 aa8.49□□□□□ -1.05
SHMT2-216ENST00000554975 DPF1Q92782 380 aa8.49□□□□□ -1.05
SHMT2-216ENST00000554975 CHCHD1Q96BP2 118 aaKnown RBP8.49□□□□□ -1.05
SHMT2-216ENST00000554975 VAMP8Q9BV40 100 aa8.49□□□□□ -1.05
SHMT2-216ENST00000554975 TSSC4Q9Y5U2 329 aaPredicted RBP8.49□□□□□ -1.05
SHMT2-216ENST00000554975 SORL1Q92673 2214 aa8.49□□□□□ -1.05
SHMT2-216ENST00000554975 RBAKDNA6NC62 111 aa8.48□□□□□ -1.05
SHMT2-216ENST00000554975 OR2T8A6NH00 312 aa8.48□□□□□ -1.05
SHMT2-216ENST00000554975 A8MWP6 167 aa8.48□□□□□ -1.05
SHMT2-216ENST00000554975 H3BTX0 84 aa8.48□□□□□ -1.05
SHMT2-216ENST00000554975 GPX1P07203 203 aa8.48□□□□□ -1.05
SHMT2-216ENST00000554975 CTSGP08311 255 aa8.48□□□□□ -1.05
SHMT2-216ENST00000554975 BMI1P35226 326 aa8.48□□□□□ -1.05
SHMT2-216ENST00000554975 PMCHL1Q16048 86 aa8.48□□□□□ -1.05
SHMT2-216ENST00000554975 C15orf32Q32M92 178 aa8.48□□□□□ -1.05
SHMT2-216ENST00000554975 METTL26Q96S19 204 aa8.48□□□□□ -1.05
SHMT2-216ENST00000554975 C20orf144Q9BQM9 153 aa8.48□□□□□ -1.05
SHMT2-216ENST00000554975 FRAS1Q86XX4 4008 aa8.48□□□□□ -1.05
SHMT2-216ENST00000554975 C20orf202A1L168 122 aa8.47□□□□□ -1.05
SHMT2-216ENST00000554975 EGR2P11161 476 aaPredicted RBP8.47□□□□□ -1.05
SHMT2-216ENST00000554975 GPR183P32249 361 aa8.47□□□□□ -1.05
SHMT2-216ENST00000554975 CAMPP49913 170 aa8.47□□□□□ -1.05
SHMT2-216ENST00000554975 ZFAND6Q6FIF0 208 aa8.47□□□□□ -1.05
SHMT2-216ENST00000554975 ADAMTSL5Q6ZMM2 481 aa8.47□□□□□ -1.05
SHMT2-216ENST00000554975 C18orf65Q6ZTR6 163 aa8.47□□□□□ -1.05
SHMT2-216ENST00000554975 Q6ZWC4 215 aa8.47□□□□□ -1.05
SHMT2-216ENST00000554975 TCF24Q7RTU0 167 aa8.47□□□□□ -1.05
SHMT2-216ENST00000554975 OR4X2Q8NGF9 303 aa8.47□□□□□ -1.05
SHMT2-216ENST00000554975 ZC2HC1AQ96GY0 325 aa8.47□□□□□ -1.05
SHMT2-216ENST00000554975 PRR25Q96S07 402 aa8.47□□□□□ -1.05
SHMT2-216ENST00000554975 ALKBH7Q9BT30 221 aaPredicted RBP8.47□□□□□ -1.05
SHMT2-216ENST00000554975 NRN1Q9NPD7 142 aa8.47□□□□□ -1.05
SHMT2-216ENST00000554975 LINC00527Q9UJ94 153 aa8.47□□□□□ -1.05
SHMT2-216ENST00000554975 ZNF580Q9UK33 172 aa8.47□□□□□ -1.05
SHMT2-216ENST00000554975 HERC2O95714 4834 aa8.47□□□□□ -1.05
SHMT2-216ENST00000554975 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.46□□□□□ -1.06
SHMT2-216ENST00000554975 TRAV8-1A0A0A6YYK1 113 aa8.46□□□□□ -1.06
SHMT2-216ENST00000554975 TRAV41A0A0B4J266 112 aa8.46□□□□□ -1.06
SHMT2-216ENST00000554975 OR5AL1P0C617 328 aa8.46□□□□□ -1.06
SHMT2-216ENST00000554975 ATP5G2Q06055 141 aa8.46□□□□□ -1.06
SHMT2-216ENST00000554975 KIAA1644Q3SXP7 199 aa8.46□□□□□ -1.06
SHMT2-216ENST00000554975 ZNF664Q8N3J9 261 aa8.46□□□□□ -1.06
SHMT2-216ENST00000554975 PGLYRP4Q96LB8 373 aa8.46□□□□□ -1.06
SHMT2-216ENST00000554975 PRO1933Q9H354 126 aa8.46□□□□□ -1.06
SHMT2-216ENST00000554975 ZFAND3Q9H8U3 227 aa8.46□□□□□ -1.06
SHMT2-216ENST00000554975 PLECQ15149 4684 aaKnown RBP8.45□□□□□ -1.06
SHMT2-216ENST00000554975 LOC102724200A0A096LPH7 203 aaPredicted RBP8.45□□□□□ -1.06
SHMT2-216ENST00000554975 A0A1W2PS18 150 aa8.45□□□□□ -1.06
SHMT2-216ENST00000554975 TMEM189A5PLL7 270 aa8.45□□□□□ -1.06
SHMT2-216ENST00000554975 ZNF785A8K8V0 405 aa8.45□□□□□ -1.06
SHMT2-216ENST00000554975 SNRPCP09234 159 aaKnown RBP8.45□□□□□ -1.06
SHMT2-216ENST00000554975 KRTDAPP60985 99 aa8.45□□□□□ -1.06
SHMT2-216ENST00000554975 RNASEKQ6P5S7 137 aaKnown RBP8.45□□□□□ -1.06
SHMT2-216ENST00000554975 GTSF1Q8WW33 167 aa8.45□□□□□ -1.06
SHMT2-216ENST00000554975 USMG5Q96IX5 58 aa8.45□□□□□ -1.06
SHMT2-216ENST00000554975 SGK494Q96LW2 274 aa8.45□□□□□ -1.06
SHMT2-216ENST00000554975 RCHY1Q96PM5 261 aa8.45□□□□□ -1.06
SHMT2-216ENST00000554975 M0R2Z0 102 aa8.44□□□□□ -1.06
SHMT2-216ENST00000554975 NUPR1O60356 82 aa8.44□□□□□ -1.06
SHMT2-216ENST00000554975 IGHG2P01859 326 aa8.44□□□□□ -1.06
SHMT2-216ENST00000554975 CTRLP40313 264 aa8.44□□□□□ -1.06
SHMT2-216ENST00000554975 C19orf54Q5BKX5 351 aa8.44□□□□□ -1.06
SHMT2-216ENST00000554975 SAMD13Q5VXD3 122 aa8.44□□□□□ -1.06
SHMT2-216ENST00000554975 LINC00322Q6ZN03 302 aaPredicted RBP8.44□□□□□ -1.06
SHMT2-216ENST00000554975 C14orf144Q96I85 54 aa8.44□□□□□ -1.06
SHMT2-216ENST00000554975 CCDC140Q96MF4 163 aa8.44□□□□□ -1.06
SHMT2-216ENST00000554975 S4R3C0 116 aa8.44□□□□□ -1.06
SHMT2-216ENST00000554975 LINC01548A6NM66 108 aa8.43□□□□□ -1.06
SHMT2-216ENST00000554975 F2Z2F3 143 aa8.43□□□□□ -1.06
SHMT2-216ENST00000554975 M0R3E3 92 aa8.43□□□□□ -1.06
SHMT2-216ENST00000554975 BUB3O43684 328 aa8.43□□□□□ -1.06
SHMT2-216ENST00000554975 IGF1P05019 195 aa8.43□□□□□ -1.06
SHMT2-216ENST00000554975 FRMD6-AS1P0C7T7 363 aa8.43□□□□□ -1.06
SHMT2-216ENST00000554975 NTF3P20783 257 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms