RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 RNF212Q495C1 297 aa4.32□□□□□ -1.72
ATXN3-230ENST00000554673 SOHLH1Q5JUK2 328 aa4.32□□□□□ -1.72
ATXN3-230ENST00000554673 AMTNQ6UX39 209 aa4.32□□□□□ -1.72
ATXN3-230ENST00000554673 GOLT1AQ6ZVE7 132 aa4.32□□□□□ -1.72
ATXN3-230ENST00000554673 TMEM61Q8N0U2 210 aa4.32□□□□□ -1.72
ATXN3-230ENST00000554673 ZFAND2AQ8N6M9 145 aa4.32□□□□□ -1.72
ATXN3-230ENST00000554673 TMEM75Q8N9X5 138 aa4.32□□□□□ -1.72
ATXN3-230ENST00000554673 OR11H1Q8NG94 326 aa4.32□□□□□ -1.72
ATXN3-230ENST00000554673 OR1N2Q8NGR9 330 aa4.32□□□□□ -1.72
ATXN3-230ENST00000554673 HIST1H2BAQ96A08 127 aa4.32□□□□□ -1.72
ATXN3-230ENST00000554673 ZC2HC1AQ96GY0 325 aa4.32□□□□□ -1.72
ATXN3-230ENST00000554673 CITED1Q99966 193 aa4.32□□□□□ -1.72
ATXN3-230ENST00000554673 SMIM7Q9BQ49 75 aa4.32□□□□□ -1.72
ATXN3-230ENST00000554673 NKX6-2Q9C056 277 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-230ENST00000554673 AGPAT4-IT1Q9H0P7 198 aa4.32□□□□□ -1.72
ATXN3-230ENST00000554673 WFDC10AQ9H1F0 79 aa4.32□□□□□ -1.72
ATXN3-230ENST00000554673 OTORQ9NRC9 128 aa4.32□□□□□ -1.72
ATXN3-230ENST00000554673 TMEM167BQ9NRX6 74 aa4.32□□□□□ -1.72
ATXN3-230ENST00000554673 THYN1Q9P016 225 aa4.32□□□□□ -1.72
ATXN3-230ENST00000554673 ZNF256Q9Y2P7 627 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-230ENST00000554673 PKD1L1Q8TDX9 2849 aa4.31□□□□□ -1.72
ATXN3-230ENST00000554673 IGKV3-7A0A075B6H7 116 aa4.31□□□□□ -1.72
ATXN3-230ENST00000554673 TGIF2-C20orf24A0A0A6YYL0 155 aa4.31□□□□□ -1.72
ATXN3-230ENST00000554673 TRBV6-1A0A0K0K1D8 114 aa4.31□□□□□ -1.72
ATXN3-230ENST00000554673 A8MTW9 85 aa4.31□□□□□ -1.72
ATXN3-230ENST00000554673 C9JCJ5 164 aa4.31□□□□□ -1.72
ATXN3-230ENST00000554673 SLC25A5P05141 298 aaKnown RBP4.31□□□□□ -1.72
ATXN3-230ENST00000554673 GIG44P09565 113 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-230ENST00000554673 CT45A10P0DMU9 189 aa4.31□□□□□ -1.72
ATXN3-230ENST00000554673 TAGLN2P37802 199 aaKnown RBP4.31□□□□□ -1.72
ATXN3-230ENST00000554673 ELOBQ15370 118 aa4.31□□□□□ -1.72
ATXN3-230ENST00000554673 TMEM183BQ1AE95 376 aa4.31□□□□□ -1.72
ATXN3-230ENST00000554673 ODF3L2Q3SX64 289 aa4.31□□□□□ -1.72
ATXN3-230ENST00000554673 Q75L30 129 aa4.31□□□□□ -1.72
ATXN3-230ENST00000554673 COX8CQ7Z4L0 72 aa4.31□□□□□ -1.72
ATXN3-230ENST00000554673 TMEM183AQ8IXX5 376 aa4.31□□□□□ -1.72
ATXN3-230ENST00000554673 GBGT1Q8N5D6 347 aa4.31□□□□□ -1.72
ATXN3-230ENST00000554673 C5orf17Q8NAS9 161 aa4.31□□□□□ -1.72
ATXN3-230ENST00000554673 GTSF1Q8WW33 167 aa4.31□□□□□ -1.72
ATXN3-230ENST00000554673 PYGO2Q9BRQ0 406 aa4.31□□□□□ -1.72
ATXN3-230ENST00000554673 RNASE7Q9H1E1 156 aaKnown RBP4.31□□□□□ -1.72
ATXN3-230ENST00000554673 SMDT1Q9H4I9 107 aa4.31□□□□□ -1.72
ATXN3-230ENST00000554673 Q9H8V8 135 aa4.31□□□□□ -1.72
ATXN3-230ENST00000554673 RPH3ALQ9UNE2 315 aa4.31□□□□□ -1.72
ATXN3-230ENST00000554673 A0A0G2JLM5 398 aa4.3□□□□□ -1.72
ATXN3-230ENST00000554673 XKRY2A2RUG3 117 aa4.3□□□□□ -1.72
ATXN3-230ENST00000554673 F6UZH7 168 aa4.3□□□□□ -1.72
ATXN3-230ENST00000554673 LINC01619G3V211 115 aa4.3□□□□□ -1.72
ATXN3-230ENST00000554673 CCL24O00175 119 aa4.3□□□□□ -1.72
ATXN3-230ENST00000554673 ZNF253O75346 499 aa4.3□□□□□ -1.72
ATXN3-230ENST00000554673 PRM2P04554 102 aa4.3□□□□□ -1.72
ATXN3-230ENST00000554673 NHLRC4P0CG21 123 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-230ENST00000554673 GZMBP10144 247 aa4.3□□□□□ -1.72
ATXN3-230ENST00000554673 PSG3Q16557 428 aa4.3□□□□□ -1.72
ATXN3-230ENST00000554673 DEFB114Q30KQ6 69 aa4.3□□□□□ -1.72
ATXN3-230ENST00000554673 PIK3CD-AS1Q5SR53 167 aa4.3□□□□□ -1.72
ATXN3-230ENST00000554673 C1orf194Q5T5A4 169 aa4.3□□□□□ -1.72
ATXN3-230ENST00000554673 LCN12Q6JVE5 192 aa4.3□□□□□ -1.72
ATXN3-230ENST00000554673 BPIFA4PQ86YQ2 179 aa4.3□□□□□ -1.72
ATXN3-230ENST00000554673 OR8I2Q8N0Y5 310 aa4.3□□□□□ -1.72
ATXN3-230ENST00000554673 ZNF418Q8TF45 676 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-230ENST00000554673 MS4A6AQ9H2W1 248 aa4.3□□□□□ -1.72
ATXN3-230ENST00000554673 AAMDCQ9H7C9 122 aa4.3□□□□□ -1.72
ATXN3-230ENST00000554673 DAZ1Q9NQZ3 744 aaKnown RBP4.3□□□□□ -1.72
ATXN3-230ENST00000554673 NAT8Q9UHE5 227 aa4.3□□□□□ -1.72
ATXN3-230ENST00000554673 A0A0U1RRA0 63 aa4.29□□□□□ -1.72
ATXN3-230ENST00000554673 A0A1B0GUS0 222 aa4.29□□□□□ -1.72
ATXN3-230ENST00000554673 CRXO43186 299 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-230ENST00000554673 TCF21O43680 179 aa4.29□□□□□ -1.72
ATXN3-230ENST00000554673 PDE6DO43924 150 aa4.29□□□□□ -1.72
ATXN3-230ENST00000554673 RPL7P18124 248 aaKnown RBP4.29□□□□□ -1.72
ATXN3-230ENST00000554673 TAS2R45P59539 299 aa4.29□□□□□ -1.72
ATXN3-230ENST00000554673 RELQ04864 619 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-230ENST00000554673 FOXI1Q12951 378 aa4.29□□□□□ -1.72
ATXN3-230ENST00000554673 PDE6HQ13956 83 aa4.29□□□□□ -1.72
ATXN3-230ENST00000554673 ADIRFQ15847 76 aa4.29□□□□□ -1.72
ATXN3-230ENST00000554673 TMEM241Q24JQ0 296 aa4.29□□□□□ -1.72
ATXN3-230ENST00000554673 RBMS3Q6XE24 437 aaKnown RBP4.29□□□□□ -1.72
ATXN3-230ENST00000554673 APRG1Q8IVJ8 170 aa4.29□□□□□ -1.72
ATXN3-230ENST00000554673 OR9G4Q8NGQ1 327 aa4.29□□□□□ -1.72
ATXN3-230ENST00000554673 METTL26Q96S19 204 aa4.29□□□□□ -1.72
ATXN3-230ENST00000554673 MAP6D1Q9H9H5 199 aa4.29□□□□□ -1.72
ATXN3-230ENST00000554673 RPS10P5Q9NQ39 176 aa4.29□□□□□ -1.72
ATXN3-230ENST00000554673 PSG8Q9UQ74 426 aa4.29□□□□□ -1.72
ATXN3-230ENST00000554673 A0A087WWC5 75 aa4.28□□□□□ -1.72
ATXN3-230ENST00000554673 IGKV3D-20A0A0C4DH25 116 aa4.28□□□□□ -1.72
ATXN3-230ENST00000554673 HELTA6NFD8 242 aa4.28□□□□□ -1.72
ATXN3-230ENST00000554673 KNCNA6PVL3 124 aa4.28□□□□□ -1.72
ATXN3-230ENST00000554673 GAS8-AS1O95177 125 aa4.28□□□□□ -1.72
ATXN3-230ENST00000554673 IFNA1P01562 189 aa4.28□□□□□ -1.72
ATXN3-230ENST00000554673 ZNF688P0C7X2 276 aa4.28□□□□□ -1.72
ATXN3-230ENST00000554673 TFPI2P48307 235 aa4.28□□□□□ -1.72
ATXN3-230ENST00000554673 SLC35B1P78383 322 aa4.28□□□□□ -1.72
ATXN3-230ENST00000554673 FLI1Q01543 452 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-230ENST00000554673 RPEL1Q2QD12 228 aa4.28□□□□□ -1.72
ATXN3-230ENST00000554673 NSUN5P1Q3KNT7 163 aa4.28□□□□□ -1.72
ATXN3-230ENST00000554673 FAM106AQ4KMX7 169 aa4.28□□□□□ -1.72
ATXN3-230ENST00000554673 C9orf47Q6ZRZ4 202 aa4.28□□□□□ -1.72
ATXN3-230ENST00000554673 PRNTQ86SH4 94 aa4.28□□□□□ -1.72
ATXN3-230ENST00000554673 STHQ8IWL8 128 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms