RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 COX8CQ7Z4L0 72 aa12.06□□□□□ -0.48
ARHGEF40-203ENST00000554514 UFC1Q9Y3C8 167 aa12.06□□□□□ -0.48
ARHGEF40-203ENST00000554514 TRAV8-2A0A0B4J237 113 aa12.05□□□□□ -0.48
ARHGEF40-203ENST00000554514 IGKV3D-20A0A0C4DH25 116 aa12.05□□□□□ -0.48
ARHGEF40-203ENST00000554514 TMEM238C9JI98 176 aa12.05□□□□□ -0.48
ARHGEF40-203ENST00000554514 IGHV4-39P01824 125 aa12.05□□□□□ -0.48
ARHGEF40-203ENST00000554514 TRGV3P03979 118 aa12.05□□□□□ -0.48
ARHGEF40-203ENST00000554514 DEFB1P60022 68 aa12.05□□□□□ -0.48
ARHGEF40-203ENST00000554514 IFI27L1Q96BM0 104 aa12.05□□□□□ -0.48
ARHGEF40-203ENST00000554514 TRAV41A0A0B4J266 112 aa12.05□□□□□ -0.48
ARHGEF40-203ENST00000554514 FBLL1A6NHQ2 334 aaKnown RBP12.05□□□□□ -0.48
ARHGEF40-203ENST00000554514 SPRY2O43597 315 aa12.05□□□□□ -0.48
ARHGEF40-203ENST00000554514 TRBV12-3P01733 135 aa12.05□□□□□ -0.48
ARHGEF40-203ENST00000554514 C16orf92Q96LL3 132 aa12.05□□□□□ -0.48
ARHGEF40-203ENST00000554514 MAP1LC3AQ9H492 121 aa12.05□□□□□ -0.48
ARHGEF40-203ENST00000554514 TRAV26-2A0A0B4J265 109 aa12.04□□□□□ -0.48
ARHGEF40-203ENST00000554514 IGHV3-11P01762 117 aa12.04□□□□□ -0.48
ARHGEF40-203ENST00000554514 COX8AP10176 69 aa12.04□□□□□ -0.48
ARHGEF40-203ENST00000554514 SMIM15Q7Z3B0 74 aa12.04□□□□□ -0.48
ARHGEF40-203ENST00000554514 SLC50A1Q9BRV3 221 aa12.04□□□□□ -0.48
ARHGEF40-203ENST00000554514 RAB9AP51151 201 aa12.04□□□□□ -0.48
ARHGEF40-203ENST00000554514 DKK2Q9UBU2 259 aa12.04□□□□□ -0.48
ARHGEF40-203ENST00000554514 LEPP41159 167 aa12.04□□□□□ -0.48
ARHGEF40-203ENST00000554514 UBE2V1Q13404 147 aa12.04□□□□□ -0.48
ARHGEF40-203ENST00000554514 LCNL1Q6ZST4 164 aa12.04□□□□□ -0.48
ARHGEF40-203ENST00000554514 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.03□□□□□ -0.488e-9■■■□□ 17.1
ARHGEF40-203ENST00000554514 TRBV7-1A0A0A6YYK4 115 aa12.03□□□□□ -0.48
ARHGEF40-203ENST00000554514 TAX1BP3O14907 124 aa12.03□□□□□ -0.48
ARHGEF40-203ENST00000554514 TNFRSF6BO95407 300 aa12.03□□□□□ -0.48
ARHGEF40-203ENST00000554514 NMUP48645 174 aa12.03□□□□□ -0.48
ARHGEF40-203ENST00000554514 RPL11P62913 178 aaKnown RBP12.03□□□□□ -0.48
ARHGEF40-203ENST00000554514 HIST1H1AQ02539 215 aaPredicted RBP12.03□□□□□ -0.48
ARHGEF40-203ENST00000554514 C12orf54Q6X4T0 127 aa12.03□□□□□ -0.48
ARHGEF40-203ENST00000554514 IGF1P05019 195 aa12.03□□□□□ -0.48
ARHGEF40-203ENST00000554514 PAX8Q06710 450 aa12.03□□□□□ -0.48
ARHGEF40-203ENST00000554514 LINC01559Q495D7 138 aa12.03□□□□□ -0.48
ARHGEF40-203ENST00000554514 C2orf91Q6ZV80 131 aa12.03□□□□□ -0.48
ARHGEF40-203ENST00000554514 MOB4Q9Y3A3 225 aa12.03□□□□□ -0.48
ARHGEF40-203ENST00000554514 ARL3P36405 182 aa12.02□□□□□ -0.48
ARHGEF40-203ENST00000554514 UNQ9165/PRO28630Q6UXU0 137 aa12.02□□□□□ -0.48
ARHGEF40-203ENST00000554514 OR4C5Q8NGB2 326 aa12.02□□□□□ -0.48
ARHGEF40-203ENST00000554514 IGHV4-61A0A0C4DH41 118 aa12.02□□□□□ -0.49
ARHGEF40-203ENST00000554514 IGHV4-38-2P0DP08 117 aa12.01□□□□□ -0.49
ARHGEF40-203ENST00000554514 SMAD7O15105 426 aaKnown RBP12.01□□□□□ -0.49
ARHGEF40-203ENST00000554514 VPS25Q9BRG1 176 aa12.01□□□□□ -0.49
ARHGEF40-203ENST00000554514 LGALS9BQ3B8N2 356 aa12□□□□□ -0.49
ARHGEF40-203ENST00000554514 LGALS9CQ6DKI2 356 aa12□□□□□ -0.49
ARHGEF40-203ENST00000554514 C20orf173Q96LM9 149 aa12□□□□□ -0.49
ARHGEF40-203ENST00000554514 H3BVH4 76 aa12□□□□□ -0.49
ARHGEF40-203ENST00000554514 PRR9Q5T870 116 aa12□□□□□ -0.49
ARHGEF40-203ENST00000554514 SPANXN1Q5VSR9 72 aa12□□□□□ -0.49
ARHGEF40-203ENST00000554514 IGHV1-69DA0A0B4J2H0 117 aa12□□□□□ -0.49
ARHGEF40-203ENST00000554514 RBAKDNA6NC62 111 aa12□□□□□ -0.49
ARHGEF40-203ENST00000554514 IGHV1-69P01742 117 aa12□□□□□ -0.49
ARHGEF40-203ENST00000554514 PRSS1P07477 247 aa12□□□□□ -0.49
ARHGEF40-203ENST00000554514 DEFB125Q8N687 156 aa12□□□□□ -0.49
ARHGEF40-203ENST00000554514 GLMPQ8WWB7 406 aa12□□□□□ -0.49
ARHGEF40-203ENST00000554514 PKD1L2Q7Z442 2459 aa12□□□□□ -0.49
ARHGEF40-203ENST00000554514 CELSR2Q9HCU4 2923 aa12□□□□□ -0.49
ARHGEF40-203ENST00000554514 PCP2Q8IVA1 136 aa11.99□□□□□ -0.49
ARHGEF40-203ENST00000554514 PIFOQ8TCI5 191 aa11.99□□□□□ -0.49
ARHGEF40-203ENST00000554514 PSMG3-AS1Q96PY0 264 aa11.99□□□□□ -0.49
ARHGEF40-203ENST00000554514 AMMECR1LQ6DCA0 310 aa11.99□□□□□ -0.49
ARHGEF40-203ENST00000554514 TMEM158Q8WZ71 300 aa11.99□□□□□ -0.49
ARHGEF40-203ENST00000554514 CRYBG3Q68DQ2 2970 aa11.98□□□□□ -0.49
ARHGEF40-203ENST00000554514 CSPG4Q6UVK1 2322 aa11.98□□□□□ -0.49
ARHGEF40-203ENST00000554514 CSMD2Q7Z408 3487 aa11.98□□□□□ -0.49
ARHGEF40-203ENST00000554514 H3BUX3 64 aa11.98□□□□□ -0.49
ARHGEF40-203ENST00000554514 PF4V1P10720 104 aa11.98□□□□□ -0.49
ARHGEF40-203ENST00000554514 FGF6P10767 208 aa11.98□□□□□ -0.49
ARHGEF40-203ENST00000554514 SRSF2Q01130 221 aaKnown RBP11.98□□□□□ -0.49
ARHGEF40-203ENST00000554514 NAA38Q9BRA0 125 aaKnown RBP11.98□□□□□ -0.49
ARHGEF40-203ENST00000554514 CNFNQ9BYD5 112 aa11.98□□□□□ -0.49
ARHGEF40-203ENST00000554514 KLK15Q9H2R5 256 aa11.98□□□□□ -0.49
ARHGEF40-203ENST00000554514 PPBPP02775 128 aa11.97□□□□□ -0.49
ARHGEF40-203ENST00000554514 SRD5A1P18405 259 aa11.97□□□□□ -0.49
ARHGEF40-203ENST00000554514 TM4SF20Q53R12 229 aa11.97□□□□□ -0.49
ARHGEF40-203ENST00000554514 TMEM97Q5BJF2 176 aa11.97□□□□□ -0.49
ARHGEF40-203ENST00000554514 Q6ZS46 218 aa11.97□□□□□ -0.49
ARHGEF40-203ENST00000554514 TTTY13Q9BZ97 58 aa11.97□□□□□ -0.49
ARHGEF40-203ENST00000554514 IGHV7-4-1A0A0J9YVY3 117 aa11.97□□□□□ -0.49
ARHGEF40-203ENST00000554514 F6UB75 175 aa11.97□□□□□ -0.49
ARHGEF40-203ENST00000554514 BLCAPP62952 87 aa11.97□□□□□ -0.49
ARHGEF40-203ENST00000554514 WFDC12Q8WWY7 111 aa11.97□□□□□ -0.49
ARHGEF40-203ENST00000554514 CCL19Q99731 98 aa11.97□□□□□ -0.49
ARHGEF40-203ENST00000554514 PIMREGQ9BSJ6 248 aa11.97□□□□□ -0.49
ARHGEF40-203ENST00000554514 UTP20O75691 2785 aaKnown RBP11.97□□□□□ -0.49
ARHGEF40-203ENST00000554514 C7orf71A4D174 169 aa11.97□□□□□ -0.49
ARHGEF40-203ENST00000554514 M0R381 172 aa11.97□□□□□ -0.49
ARHGEF40-203ENST00000554514 OR2K2Q8NGT1 345 aa11.97□□□□□ -0.49
ARHGEF40-203ENST00000554514 FOXC2Q99958 501 aa11.97□□□□□ -0.49
ARHGEF40-203ENST00000554514 HIF1ANQ9NWT6 349 aa11.97□□□□□ -0.49
ARHGEF40-203ENST00000554514 FCER1GP30273 86 aa11.96□□□□□ -0.5
ARHGEF40-203ENST00000554514 NXT2Q9NPJ8 142 aaKnown RBP11.96□□□□□ -0.5
ARHGEF40-203ENST00000554514 U3KQE9 123 aa11.96□□□□□ -0.5
ARHGEF40-203ENST00000554514 FLNCQ14315 2725 aa11.95□□□□□ -0.5
ARHGEF40-203ENST00000554514 FAM223BA6NKX1 122 aa11.95□□□□□ -0.5
ARHGEF40-203ENST00000554514 C9orf47Q6ZRZ4 202 aa11.95□□□□□ -0.5
ARHGEF40-203ENST00000554514 FAM223AQ8IWN6 122 aa11.95□□□□□ -0.5
ARHGEF40-203ENST00000554514 CFAP46Q8IYW2 2715 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms