RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 A0A096LNT2 108 aa9.03□□□□□ -0.96
SHMT2-212ENST00000554467 TRBV12-3P01733 135 aa9.03□□□□□ -0.96
SHMT2-212ENST00000554467 APOHP02749 345 aaPredicted RBP9.03□□□□□ -0.96
SHMT2-212ENST00000554467 TRGV3P03979 118 aa9.03□□□□□ -0.96
SHMT2-212ENST00000554467 DEFB112Q30KQ8 113 aa9.03□□□□□ -0.96
SHMT2-212ENST00000554467 TMSB15BA0A087X1C1 80 aa9.03□□□□□ -0.96
SHMT2-212ENST00000554467 MRPS12O15235 138 aaKnown RBP9.03□□□□□ -0.96
SHMT2-212ENST00000554467 SMAGPQ0VAQ4 97 aa9.03□□□□□ -0.96
SHMT2-212ENST00000554467 SIGLEC15Q6ZMC9 328 aa9.03□□□□□ -0.96
SHMT2-212ENST00000554467 KLK15Q9H2R5 256 aa9.03□□□□□ -0.96
SHMT2-212ENST00000554467 OTORQ9NRC9 128 aa9.03□□□□□ -0.96
SHMT2-212ENST00000554467 TMEM14CQ9P0S9 112 aa9.03□□□□□ -0.96
SHMT2-212ENST00000554467 CHEK1O14757 476 aa9.03□□□□□ -0.96
SHMT2-212ENST00000554467 SLC25A16P16260 332 aa9.03□□□□□ -0.96
SHMT2-212ENST00000554467 TCTAP57738 103 aa9.03□□□□□ -0.96
SHMT2-212ENST00000554467 LINC01356Q8N9X3 169 aa9.03□□□□□ -0.96
SHMT2-212ENST00000554467 GRAMD2BQ96HH9 432 aa9.03□□□□□ -0.96
SHMT2-212ENST00000554467 CR1P17927 2039 aa9.02□□□□□ -0.96
SHMT2-212ENST00000554467 TMEM97Q5BJF2 176 aa9.02□□□□□ -0.96
SHMT2-212ENST00000554467 RABAC1Q9UI14 185 aa9.02□□□□□ -0.96
SHMT2-212ENST00000554467 FGF6P10767 208 aa9.02□□□□□ -0.97
SHMT2-212ENST00000554467 DSCR9P59020 149 aa9.02□□□□□ -0.97
SHMT2-212ENST00000554467 GPR82Q96P67 336 aa9.02□□□□□ -0.97
SHMT2-212ENST00000554467 DUX5Q96PT3 197 aa9.02□□□□□ -0.97
SHMT2-212ENST00000554467 A6NDX4 124 aa9.02□□□□□ -0.97
SHMT2-212ENST00000554467 LEPROTL1O95214 131 aa9.02□□□□□ -0.97
SHMT2-212ENST00000554467 COX8AP10176 69 aa9.02□□□□□ -0.97
SHMT2-212ENST00000554467 SMAD5-AS1Q9Y6J3 95 aa9.02□□□□□ -0.97
SHMT2-212ENST00000554467 PDZD2O15018 2839 aa9.01□□□□□ -0.97
SHMT2-212ENST00000554467 ATP5G2Q06055 141 aa9.01□□□□□ -0.97
SHMT2-212ENST00000554467 RASL11AQ6T310 242 aa9.01□□□□□ -0.97
SHMT2-212ENST00000554467 GTF2H5Q6ZYL4 71 aa9.01□□□□□ -0.97
SHMT2-212ENST00000554467 ZNF48Q96MX3 618 aaPredicted RBP9.01□□□□□ -0.97
SHMT2-212ENST00000554467 IGKV2-40A0A087WW87 121 aaPredicted RBP9.01□□□□□ -0.97
SHMT2-212ENST00000554467 TEX48A0A1B0GUV7 120 aa9.01□□□□□ -0.97
SHMT2-212ENST00000554467 NCR2O95944 276 aa9.01□□□□□ -0.97
SHMT2-212ENST00000554467 IGKV2D-40P01614 121 aaPredicted RBP9.01□□□□□ -0.97
SHMT2-212ENST00000554467 IGLV2-11P01706 119 aa9.01□□□□□ -0.97
SHMT2-212ENST00000554467 PF4V1P10720 104 aa9.01□□□□□ -0.97
SHMT2-212ENST00000554467 C10orf99Q6UWK7 81 aa9.01□□□□□ -0.97
SHMT2-212ENST00000554467 Q96MF0 132 aa9.01□□□□□ -0.97
SHMT2-212ENST00000554467 RPP21Q9H633 154 aaKnown RBP9.01□□□□□ -0.97
SHMT2-212ENST00000554467 KLF12Q9Y4X4 402 aa9.01□□□□□ -0.97
SHMT2-212ENST00000554467 A0A1B0GXF2 115 aa9.01□□□□□ -0.97
SHMT2-212ENST00000554467 H3BRM9 83 aa9.01□□□□□ -0.97
SHMT2-212ENST00000554467 Q86TA4 180 aa9.01□□□□□ -0.97
SHMT2-212ENST00000554467 EEF1AKMT3Q96AZ1 226 aa9.01□□□□□ -0.97
SHMT2-212ENST00000554467 A0A0G2JLM5 398 aa9□□□□□ -0.97
SHMT2-212ENST00000554467 HBBP68871 147 aa9□□□□□ -0.97
SHMT2-212ENST00000554467 DEFB113Q30KQ7 82 aa9□□□□□ -0.97
SHMT2-212ENST00000554467 RNF182Q8N6D2 247 aa9□□□□□ -0.97
SHMT2-212ENST00000554467 OR2K2Q8NGT1 345 aa9□□□□□ -0.97
SHMT2-212ENST00000554467 OR10AG1Q8NH19 301 aa9□□□□□ -0.97
SHMT2-212ENST00000554467 RAB37Q96AX2 223 aa9□□□□□ -0.97
SHMT2-212ENST00000554467 ZFAND3Q9H8U3 227 aa9□□□□□ -0.97
SHMT2-212ENST00000554467 A8MWL6 223 aa9□□□□□ -0.97
SHMT2-212ENST00000554467 LTAP01374 205 aa9□□□□□ -0.97
SHMT2-212ENST00000554467 SEC11AP67812 179 aa9□□□□□ -0.97
SHMT2-212ENST00000554467 IL17RELQ6ZVW7 336 aa9□□□□□ -0.97
SHMT2-212ENST00000554467 FMC1Q96HJ9 113 aa9□□□□□ -0.97
SHMT2-212ENST00000554467 ATP6V0BQ99437 205 aa9□□□□□ -0.97
SHMT2-212ENST00000554467 NIPBLQ6KC79 2804 aaeCLIP9□□□□□ -0.97
SHMT2-212ENST00000554467 CLPSL1A2RUU4 121 aa8.99□□□□□ -0.97
SHMT2-212ENST00000554467 Q8TAT8 98 aa8.99□□□□□ -0.97
SHMT2-212ENST00000554467 GTSF1Q8WW33 167 aa8.99□□□□□ -0.97
SHMT2-212ENST00000554467 MLST8Q9BVC4 326 aa8.99□□□□□ -0.97
SHMT2-212ENST00000554467 TMEM191AQ9H0A3 160 aa8.99□□□□□ -0.97
SHMT2-212ENST00000554467 IGHV4-31P0DP07 118 aa8.99□□□□□ -0.97
SHMT2-212ENST00000554467 KIR3DS1Q14943 382 aa8.99□□□□□ -0.97
SHMT2-212ENST00000554467 C18orf15Q96N68 181 aa8.99□□□□□ -0.97
SHMT2-212ENST00000554467 C8orf49Q96NF6 230 aa8.99□□□□□ -0.97
SHMT2-212ENST00000554467 MS4A6AQ9H2W1 248 aa8.99□□□□□ -0.97
SHMT2-212ENST00000554467 RAB9AP51151 201 aa8.99□□□□□ -0.97
SHMT2-212ENST00000554467 SERTM2A0A1B0GWG4 89 aa8.98□□□□□ -0.97
SHMT2-212ENST00000554467 ZNF785A8K8V0 405 aa8.98□□□□□ -0.97
SHMT2-212ENST00000554467 C19orf54Q5BKX5 351 aa8.98□□□□□ -0.97
SHMT2-212ENST00000554467 LINC01545Q5VT33 79 aa8.98□□□□□ -0.97
SHMT2-212ENST00000554467 UNQ9165/PRO28630Q6UXU0 137 aa8.98□□□□□ -0.97
SHMT2-212ENST00000554467 AAMDCQ9H7C9 122 aa8.98□□□□□ -0.97
SHMT2-212ENST00000554467 AKAP9Q99996 3911 aa8.98□□□□□ -0.97
SHMT2-212ENST00000554467 TRAV26-1A0A087WT03 109 aa8.98□□□□□ -0.97
SHMT2-212ENST00000554467 SMAD7O15105 426 aaKnown RBP8.98□□□□□ -0.97
SHMT2-212ENST00000554467 SCGB2A1O75556 95 aa8.98□□□□□ -0.97
SHMT2-212ENST00000554467 IGHG2P01859 326 aa8.98□□□□□ -0.97
SHMT2-212ENST00000554467 SCGB1A1P11684 91 aa8.98□□□□□ -0.97
SHMT2-212ENST00000554467 RPL7P18124 248 aaKnown RBP8.98□□□□□ -0.97
SHMT2-212ENST00000554467 SIGMAR1Q99720 223 aa8.98□□□□□ -0.97
SHMT2-212ENST00000554467 A0A1W2PPM0 123 aa8.98□□□□□ -0.97
SHMT2-212ENST00000554467 FAM231DQ6ZW35 169 aa8.98□□□□□ -0.97
SHMT2-212ENST00000554467 PSG8Q9UQ74 426 aa8.98□□□□□ -0.97
SHMT2-212ENST00000554467 IGKV3-7A0A075B6H7 116 aa8.97□□□□□ -0.97
SHMT2-212ENST00000554467 LOC389332A0A1B0GUA5 103 aa8.97□□□□□ -0.97
SHMT2-212ENST00000554467 ARL3P36405 182 aa8.97□□□□□ -0.97
SHMT2-212ENST00000554467 FXYD7P58549 80 aa8.97□□□□□ -0.97
SHMT2-212ENST00000554467 CHCHD1Q96BP2 118 aaKnown RBP8.97□□□□□ -0.97
SHMT2-212ENST00000554467 BEX4Q9NWD9 120 aaPredicted RBP8.97□□□□□ -0.97
SHMT2-212ENST00000554467 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.97□□□□□ -0.97
SHMT2-212ENST00000554467 TRBV7-1A0A0A6YYK4 115 aa8.97□□□□□ -0.97
SHMT2-212ENST00000554467 BUB3O43684 328 aa8.97□□□□□ -0.97
SHMT2-212ENST00000554467 SMIM17P0DL12 118 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms