RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 C11orf53Q8IXP5 236 aa2.08□□□□□ -2.08
PRPF39-206ENST00000554429 NEXN-AS1Q8NBZ9 246 aa2.08□□□□□ -2.08
PRPF39-206ENST00000554429 DEFB108BQ8NET1 73 aa2.08□□□□□ -2.08
PRPF39-206ENST00000554429 FAM3DQ96BQ1 224 aa2.08□□□□□ -2.08
PRPF39-206ENST00000554429 HDHD3Q9BSH5 251 aaPredicted RBP2.08□□□□□ -2.08
PRPF39-206ENST00000554429 TMEM70Q9BUB7 260 aa2.08□□□□□ -2.08
PRPF39-206ENST00000554429 RTL8AQ9BWD3 113 aa2.08□□□□□ -2.08
PRPF39-206ENST00000554429 MRPL20Q9BYC9 149 aaKnown RBP2.08□□□□□ -2.08
PRPF39-206ENST00000554429 MAP6D1Q9H9H5 199 aa2.08□□□□□ -2.08
PRPF39-206ENST00000554429 DYNLRB1Q9NP97 96 aa2.08□□□□□ -2.08
PRPF39-206ENST00000554429 CMC2Q9NRP2 79 aa2.08□□□□□ -2.08
PRPF39-206ENST00000554429 MRPS16Q9Y3D3 137 aaKnown RBP2.08□□□□□ -2.08
PRPF39-206ENST00000554429 F11RQ9Y624 299 aaKnown RBP2.08□□□□□ -2.08
PRPF39-206ENST00000554429 LINC00312Q9Y6C7 94 aa2.08□□□□□ -2.08
PRPF39-206ENST00000554429 NBEAL1Q6ZS30 2694 aa2.08□□□□□ -2.08
PRPF39-206ENST00000554429 PCLOQ9Y6V0 5065 aa2.08□□□□□ -2.08
PRPF39-206ENST00000554429 DNAJC9-AS1A6NH13 148 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 ZNF736B4DX44 427 aaPredicted RBP2.07□□□□□ -2.08
PRPF39-206ENST00000554429 GEMIN2O14893 280 aaKnown RBP2.07□□□□□ -2.08
PRPF39-206ENST00000554429 NDUFS5O43920 106 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 NDUFB6O95139 128 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 PRB4P10163 310 aaPredicted RBP2.07□□□□□ -2.08
PRPF39-206ENST00000554429 NMUP48645 174 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 RIGQ13278 110 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 KRTAP27-1Q3LI81 207 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 KLF17Q5JT82 389 aaPredicted RBP2.07□□□□□ -2.08
PRPF39-206ENST00000554429 WDR38Q5JTN6 314 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 ZC2HC1BQ5TFG8 222 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 TEX43Q6ZNM6 134 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 Q6ZRU5 148 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 PRNTQ86SH4 94 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 TRAPPC6BQ86SZ2 158 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 LINC00311Q8N616 119 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 ZNF709Q8N972 641 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 OR10G8Q8NGN5 311 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 OR2T10Q8NGZ9 312 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 OR9G1Q8NH87 305 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 DCANP1Q8TF63 244 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 ZNF799Q96GE5 643 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 YPEL4Q96NS1 127 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 PAXXQ9BUH6 204 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 WI2-2373I1.2A0A1W2PRP0 233 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 WNT9BO14905 357 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 IGHV3-9P01782 118 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 DEFA4P12838 97 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 TPT1P13693 172 aaKnown RBP2.07□□□□□ -2.08
PRPF39-206ENST00000554429 OPRK1P41145 380 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 C11orf87Q6NUJ2 197 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 Q6YL49 198 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 WDR86Q86TI4 376 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 TMEM106BQ9NUM4 274 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 CKLFQ9UBR5 152 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 CACNG5Q9UF02 275 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 TRRAPQ9Y4A5 3859 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 IGKV1D-43A0A0B4J1Z2 117 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 ARRDC5A6NEK1 342 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 J3QRE1 110 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 SOCS1O15524 211 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 SFT2D2O95562 160 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 IGHV1-46P01743 117 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 TRGC2P03986 189 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 CXCL1P09341 107 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 ASAH2BP0C7U1 165 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 RPL18Q07020 188 aaKnown RBP2.07□□□□□ -2.08
PRPF39-206ENST00000554429 RBMY1FQ15415 496 aaKnown RBP2.07□□□□□ -2.08
PRPF39-206ENST00000554429 CLEC19AQ6UXS0 136 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 SIGLECL1Q8N7X8 197 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 NABP1Q96AH0 204 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 FAM218AQ96MZ4 157 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 C20orf78Q9BR46 151 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 MRPL32Q9BYC8 188 aaKnown RBP2.07□□□□□ -2.08
PRPF39-206ENST00000554429 TAAR3PQ9P1P4 343 aa2.07□□□□□ -2.08
PRPF39-206ENST00000554429 CLPSL1A2RUU4 121 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 C7orf77A4D0Y5 90 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 CD300LBA8K4G0 201 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 A8MWV9 139 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 M0R1X1 148 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 ANGPTL7O43827 346 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 HYPMO75409 117 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 NDUFB2O95178 105 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 APOMO95445 188 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 PATE4P0C8F1 98 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 CRISP2P16562 243 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 ZFP36P26651 326 aaKnown RBP2.06□□□□□ -2.08
PRPF39-206ENST00000554429 PSMB3P49720 205 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 LINC00310P59036 64 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 BRWD1-AS2P59051 145 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 FAM27BQ5VT28 67 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 MORN5Q5VZ52 161 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 SCGB1D4Q6XE38 83 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 PCP2Q8IVA1 136 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 ZNRF1Q8ND25 227 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 OR4B1Q8NGF8 309 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 OR4X2Q8NGF9 303 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 FAM213BQ8TBF2 198 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 ABRACLQ9P1F3 81 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 PRKDCP78527 4128 aaKnown RBP2.06□□□□□ -2.08
PRPF39-206ENST00000554429 TENM1Q9UKZ4 2725 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 TRAV8-3A0A0A6YYJ7 113 aa2.06□□□□□ -2.08
PRPF39-206ENST00000554429 IGHV2-26A0A0B4J1V2 119 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms