RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 LINC01600Q96MT4 127 aa4.4□□□□□ -1.71
ATXN3-224ENST00000554040 ARV1Q9H2C2 271 aa4.4□□□□□ -1.71
ATXN3-224ENST00000554040 DPH3P1Q9H4G8 78 aa4.4□□□□□ -1.71
ATXN3-224ENST00000554040 SHPKQ9UHJ6 478 aa4.4□□□□□ -1.71
ATXN3-224ENST00000554040 GPR132Q9UNW8 380 aa4.4□□□□□ -1.71
ATXN3-224ENST00000554040 KCNIP3Q9Y2W7 256 aa4.4□□□□□ -1.71
ATXN3-224ENST00000554040 PXMP4Q9Y6I8 212 aa4.4□□□□□ -1.71
ATXN3-224ENST00000554040 IGHV1OR15-1A0A075B7D0 117 aa4.39□□□□□ -1.71
ATXN3-224ENST00000554040 H3BTX0 84 aa4.39□□□□□ -1.71
ATXN3-224ENST00000554040 PITX3O75364 302 aa4.39□□□□□ -1.71
ATXN3-224ENST00000554040 APOA1P02647 267 aa4.39□□□□□ -1.71
ATXN3-224ENST00000554040 LINC00869P0C866 280 aa4.39□□□□□ -1.71
ATXN3-224ENST00000554040 TGFBR1P36897 503 aa4.39□□□□□ -1.71
ATXN3-224ENST00000554040 ERCC8Q13216 396 aa4.39□□□□□ -1.71
ATXN3-224ENST00000554040 OPCMLQ14982 345 aa4.39□□□□□ -1.71
ATXN3-224ENST00000554040 SURF2Q15527 256 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-224ENST00000554040 Q6ZQT7 251 aa4.39□□□□□ -1.71
ATXN3-224ENST00000554040 BPIFA4PQ86YQ2 179 aa4.39□□□□□ -1.71
ATXN3-224ENST00000554040 HSD17B11Q8NBQ5 300 aa4.39□□□□□ -1.71
ATXN3-224ENST00000554040 OR52I2Q8NH67 350 aa4.39□□□□□ -1.71
ATXN3-224ENST00000554040 ATP6V0E2Q8NHE4 81 aa4.39□□□□□ -1.71
ATXN3-224ENST00000554040 LINC00477Q96M19 166 aa4.39□□□□□ -1.71
ATXN3-224ENST00000554040 CNBD2Q96M20 576 aa4.39□□□□□ -1.71
ATXN3-224ENST00000554040 ARL6Q9H0F7 186 aa4.39□□□□□ -1.71
ATXN3-224ENST00000554040 COMMD3Q9UBI1 195 aa4.39□□□□□ -1.71
ATXN3-224ENST00000554040 MTFP1Q9UDX5 166 aa4.39□□□□□ -1.71
ATXN3-224ENST00000554040 TRAV4A0A0B4J268 109 aa4.38□□□□□ -1.71
ATXN3-224ENST00000554040 A0A0D9SG52 128 aa4.38□□□□□ -1.71
ATXN3-224ENST00000554040 MED6O75586 246 aa4.38□□□□□ -1.71
ATXN3-224ENST00000554040 RAB3DO95716 219 aa4.38□□□□□ -1.71
ATXN3-224ENST00000554040 GPX1P07203 203 aa4.38□□□□□ -1.71
ATXN3-224ENST00000554040 NMBP08949 121 aa4.38□□□□□ -1.71
ATXN3-224ENST00000554040 OR4E1P0C645 316 aa4.38□□□□□ -1.71
ATXN3-224ENST00000554040 IGLC2P0DOY2 106 aa4.38□□□□□ -1.71
ATXN3-224ENST00000554040 CRISP2P16562 243 aa4.38□□□□□ -1.71
ATXN3-224ENST00000554040 LINC00305Q7Z4B0 112 aa4.38□□□□□ -1.71
ATXN3-224ENST00000554040 TMEM229BQ8NBD8 167 aa4.38□□□□□ -1.71
ATXN3-224ENST00000554040 OR4C5Q8NGB2 326 aa4.38□□□□□ -1.71
ATXN3-224ENST00000554040 OR51S1Q8NGJ8 323 aa4.38□□□□□ -1.71
ATXN3-224ENST00000554040 CIB3Q96Q77 187 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-224ENST00000554040 AGPAT4-IT1Q9H0P7 198 aa4.38□□□□□ -1.71
ATXN3-224ENST00000554040 RPH3ALQ9UNE2 315 aa4.38□□□□□ -1.71
ATXN3-224ENST00000554040 TRAV8-1A0A0A6YYK1 113 aa4.37□□□□□ -1.71
ATXN3-224ENST00000554040 SMCO3A2RU48 225 aa4.37□□□□□ -1.71
ATXN3-224ENST00000554040 GGTLC3B5MD39 225 aa4.37□□□□□ -1.71
ATXN3-224ENST00000554040 H3BQ15 152 aa4.37□□□□□ -1.71
ATXN3-224ENST00000554040 GATA1P15976 413 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-224ENST00000554040 TAS2R19P59542 299 aa4.37□□□□□ -1.71
ATXN3-224ENST00000554040 SPANXN5Q5MJ07 72 aa4.37□□□□□ -1.71
ATXN3-224ENST00000554040 FFAR4Q5NUL3 377 aa4.37□□□□□ -1.71
ATXN3-224ENST00000554040 FAM122CQ6P4D5 195 aa4.37□□□□□ -1.71
ATXN3-224ENST00000554040 ZFAND2AQ8N6M9 145 aa4.37□□□□□ -1.71
ATXN3-224ENST00000554040 RMI2Q96E14 147 aa4.37□□□□□ -1.71
ATXN3-224ENST00000554040 MRPL53Q96EL3 112 aaKnown RBP4.37□□□□□ -1.71
ATXN3-224ENST00000554040 SPXQ9BT56 116 aa4.37□□□□□ -1.71
ATXN3-224ENST00000554040 GTSF1LQ9H1H1 148 aa4.37□□□□□ -1.71
ATXN3-224ENST00000554040 IGHV3-16A0A0C4DH30 117 aa4.36□□□□□ -1.71
ATXN3-224ENST00000554040 FABP12A6NFH5 140 aa4.36□□□□□ -1.71
ATXN3-224ENST00000554040 K7EPK0 472 aa4.36□□□□□ -1.71
ATXN3-224ENST00000554040 M0R3E3 92 aa4.36□□□□□ -1.71
ATXN3-224ENST00000554040 WRBO00258 174 aa4.36□□□□□ -1.71
ATXN3-224ENST00000554040 SYNGR2O43760 224 aa4.36□□□□□ -1.71
ATXN3-224ENST00000554040 HPGDSO60760 199 aa4.36□□□□□ -1.71
ATXN3-224ENST00000554040 KRTAP10-8P60410 259 aa4.36□□□□□ -1.71
ATXN3-224ENST00000554040 BAK1Q16611 211 aa4.36□□□□□ -1.71
ATXN3-224ENST00000554040 GUK1Q16774 197 aa4.36□□□□□ -1.71
ATXN3-224ENST00000554040 PRR9Q5T870 116 aa4.36□□□□□ -1.71
ATXN3-224ENST00000554040 FAAP20Q6NZ36 180 aa4.36□□□□□ -1.71
ATXN3-224ENST00000554040 DAZ4Q86SG3 579 aaKnown RBP4.36□□□□□ -1.71
ATXN3-224ENST00000554040 DAZ3Q9NR90 486 aaKnown RBP4.36□□□□□ -1.71
ATXN3-224ENST00000554040 STRAPQ9Y3F4 350 aaKnown RBP4.36□□□□□ -1.71
ATXN3-224ENST00000554040 FSIP2Q5CZC0 6907 aa4.35□□□□□ -1.71
ATXN3-224ENST00000554040 IGKV2D-24A0A075B6R9 120 aa4.35□□□□□ -1.71
ATXN3-224ENST00000554040 A0A0J9YXV3 536 aa4.35□□□□□ -1.71
ATXN3-224ENST00000554040 A0A0U1RQV1 116 aa4.35□□□□□ -1.71
ATXN3-224ENST00000554040 DISC1C4P0D8 188 aa4.35□□□□□ -1.71
ATXN3-224ENST00000554040 ZNF253O75346 499 aa4.35□□□□□ -1.71
ATXN3-224ENST00000554040 SLC25A6P12236 298 aa4.35□□□□□ -1.71
ATXN3-224ENST00000554040 SRPXP78539 464 aa4.35□□□□□ -1.71
ATXN3-224ENST00000554040 VWC2Q2TAL6 325 aa4.35□□□□□ -1.71
ATXN3-224ENST00000554040 C14orf177Q52M58 125 aa4.35□□□□□ -1.71
ATXN3-224ENST00000554040 SLC25A29Q8N8R3 303 aa4.35□□□□□ -1.71
ATXN3-224ENST00000554040 YIPF6Q96EC8 236 aa4.35□□□□□ -1.71
ATXN3-224ENST00000554040 PRADC1Q9BSG0 188 aa4.35□□□□□ -1.71
ATXN3-224ENST00000554040 SRRQ9GZT4 340 aa4.35□□□□□ -1.71
ATXN3-224ENST00000554040 NPVFQ9HCQ7 196 aa4.35□□□□□ -1.71
ATXN3-224ENST00000554040 PIGBOS1A0A0B4J2F0 54 aa4.34□□□□□ -1.71
ATXN3-224ENST00000554040 DUXBA0A1W2PPF3 345 aa4.34□□□□□ -1.71
ATXN3-224ENST00000554040 FAM25AB3EWG3 89 aa4.34□□□□□ -1.71
ATXN3-224ENST00000554040 FAM25CB3EWG5 89 aa4.34□□□□□ -1.71
ATXN3-224ENST00000554040 FAM25GB3EWG6 89 aa4.34□□□□□ -1.71
ATXN3-224ENST00000554040 ANKRD65E5RJM6 399 aa4.34□□□□□ -1.71
ATXN3-224ENST00000554040 H3BP45 60 aa4.34□□□□□ -1.71
ATXN3-224ENST00000554040 PANO1I0J062 215 aa4.34□□□□□ -1.71
ATXN3-224ENST00000554040 M0R2P5 195 aa4.34□□□□□ -1.71
ATXN3-224ENST00000554040 GOSR2O14653 212 aa4.34□□□□□ -1.71
ATXN3-224ENST00000554040 ANXA3P12429 323 aa4.34□□□□□ -1.71
ATXN3-224ENST00000554040 LSM3P62310 102 aaKnown RBP4.34□□□□□ -1.71
ATXN3-224ENST00000554040 POLR2GP62487 172 aaKnown RBP eCLIP4.34□□□□□ -1.71
ATXN3-224ENST00000554040 SLC38A11Q08AI6 406 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms