RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 IGF2P01344 180 aa0.05□□□□□ -2.4
SCAF11-215ENST00000551391 S100A11P31949 105 aa0.05□□□□□ -2.4
SCAF11-215ENST00000551391 SNRPD3P62318 126 aaKnown RBP0.05□□□□□ -2.4
SCAF11-215ENST00000551391 FXYD3Q14802 87 aa0.05□□□□□ -2.4
SCAF11-215ENST00000551391 TRIQKQ629K1 86 aa0.05□□□□□ -2.4
SCAF11-215ENST00000551391 LINC00208Q96KT6 92 aa0.05□□□□□ -2.4
SCAF11-215ENST00000551391 ANK1P16157 1881 aa0.05□□□□□ -2.4
SCAF11-215ENST00000551391 NUP210Q8TEM1 1887 aaPredicted RBP0.05□□□□□ -2.4
SCAF11-215ENST00000551391 TRBV7-6A0A0J9YX20 115 aa0.04□□□□□ -2.4
SCAF11-215ENST00000551391 LOC107986453A0A1B0GWG9 222 aa0.04□□□□□ -2.4
SCAF11-215ENST00000551391 BBIP1A8MTZ0 92 aa0.04□□□□□ -2.4
SCAF11-215ENST00000551391 PFDN1O60925 122 aa0.04□□□□□ -2.4
SCAF11-215ENST00000551391 SRP9P49458 86 aaKnown RBP0.04□□□□□ -2.4
SCAF11-215ENST00000551391 ASB16-AS1Q495Z4 193 aa0.04□□□□□ -2.4
SCAF11-215ENST00000551391 MORN4Q8NDC4 146 aa0.04□□□□□ -2.4
SCAF11-215ENST00000551391 CCDC32Q9BV29 185 aa0.04□□□□□ -2.4
SCAF11-215ENST00000551391 FAM135BQ49AJ0 1406 aa0.04□□□□□ -2.4
SCAF11-215ENST00000551391 LINC00305Q7Z4B0 112 aa0.03□□□□□ -2.4
SCAF11-215ENST00000551391 STX12Q86Y82 276 aa0.03□□□□□ -2.4
SCAF11-215ENST00000551391 C5orf56Q8N8D9 126 aa0.03□□□□□ -2.4
SCAF11-215ENST00000551391 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.03□□□□□ -2.4
SCAF11-215ENST00000551391 TRAV13-1A0A0B4J241 112 aa0.02□□□□□ -2.41
SCAF11-215ENST00000551391 A0A1W2PRE2 83 aa0.02□□□□□ -2.41
SCAF11-215ENST00000551391 IFITM5A6NNB3 132 aa0.02□□□□□ -2.41
SCAF11-215ENST00000551391 FAM107AO95990 144 aa0.02□□□□□ -2.41
SCAF11-215ENST00000551391 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.02□□□□□ -2.41
SCAF11-215ENST00000551391 LXNQ9BS40 222 aa0.02□□□□□ -2.41
SCAF11-215ENST00000551391 FKBP11Q9NYL4 201 aa0.02□□□□□ -2.41
SCAF11-215ENST00000551391 MRPL36Q9P0J6 103 aaKnown RBP0.02□□□□□ -2.41
SCAF11-215ENST00000551391 ATPIF1Q9UII2 106 aa0.02□□□□□ -2.41
SCAF11-215ENST00000551391 MED31Q9Y3C7 131 aa0.02□□□□□ -2.41
SCAF11-215ENST00000551391 TPRP12270 2363 aaKnown RBP0.01□□□□□ -2.41
SCAF11-215ENST00000551391 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.01□□□□□ -2.41
SCAF11-215ENST00000551391 HIGD1CA8MV81 97 aa0.01□□□□□ -2.41
SCAF11-215ENST00000551391 E7EQ34 232 aa0.01□□□□□ -2.41
SCAF11-215ENST00000551391 ZNF56Q15929 161 aa0.01□□□□□ -2.41
SCAF11-215ENST00000551391 OR8J3Q8NGG0 315 aa0.01□□□□□ -2.41
SCAF11-215ENST00000551391 PCBD2Q9H0N5 130 aa0.01□□□□□ -2.41
SCAF11-215ENST00000551391 ATG2AQ2TAZ0 1938 aa0.01□□□□□ -2.41
SCAF11-215ENST00000551391 LOC107984156A0A0G2JMH3 177 aa0□□□□□ -2.41
SCAF11-215ENST00000551391 LOC101927531A0A1B0GV80 90 aa0□□□□□ -2.41
SCAF11-215ENST00000551391 TMEM30CPA0ZSE6 113 aa0□□□□□ -2.41
SCAF11-215ENST00000551391 H3BMG7 143 aa0□□□□□ -2.41
SCAF11-215ENST00000551391 KDM6BO15054 1643 aa0□□□□□ -2.41
SCAF11-215ENST00000551391 GNG10P50151 68 aa0□□□□□ -2.41
SCAF11-215ENST00000551391 ARL17AQ8IVW1 177 aa0□□□□□ -2.41
SCAF11-215ENST00000551391 TEX29Q8N6K0 151 aa0□□□□□ -2.41
SCAF11-215ENST00000551391 OR51A4Q8NGJ6 313 aa0□□□□□ -2.41
SCAF11-215ENST00000551391 THEM6Q8WUY1 208 aa0□□□□□ -2.41
SCAF11-215ENST00000551391 DMAC1Q96GE9 116 aa0□□□□□ -2.41
SCAF11-215ENST00000551391 PIEZO1Q92508 2521 aa-0.01□□□□□ -2.41
SCAF11-215ENST00000551391 WDR97A6NE52 1622 aa-0.01□□□□□ -2.41
SCAF11-215ENST00000551391 TMEM189A5PLL7 270 aa-0.01□□□□□ -2.41
SCAF11-215ENST00000551391 TPST1O60507 370 aa-0.01□□□□□ -2.41
SCAF11-215ENST00000551391 EDF1O60869 148 aaKnown RBP-0.01□□□□□ -2.41
SCAF11-215ENST00000551391 SLC25A4P12235 298 aa-0.01□□□□□ -2.41
SCAF11-215ENST00000551391 G0S2P27469 103 aa-0.01□□□□□ -2.41
SCAF11-215ENST00000551391 ETV6P41212 452 aa-0.01□□□□□ -2.41
SCAF11-215ENST00000551391 POLR2HP52434 150 aaKnown RBP-0.01□□□□□ -2.41
SCAF11-215ENST00000551391 GTF2A1P52655 376 aaPredicted RBP-0.01□□□□□ -2.41
SCAF11-215ENST00000551391 HRCT1Q6UXD1 115 aa-0.01□□□□□ -2.41
SCAF11-215ENST00000551391 NAT14Q8WUY8 206 aa-0.01□□□□□ -2.41
SCAF11-215ENST00000551391 COMMD3Q9UBI1 195 aa-0.01□□□□□ -2.41
SCAF11-215ENST00000551391 ZFYVE26Q68DK2 2539 aa-0.01□□□□□ -2.41
SCAF11-215ENST00000551391 LRP1Q07954 4544 aaKnown RBP-0.01□□□□□ -2.41
SCAF11-215ENST00000551391 A2MP01023 1474 aa-0.02□□□□□ -2.41
SCAF11-215ENST00000551391 CDK12Q9NYV4 1490 aaPredicted RBP-0.02□□□□□ -2.41
SCAF11-215ENST00000551391 A0A096LNT2 108 aa-0.02□□□□□ -2.41
SCAF11-215ENST00000551391 LOC107984640A0A0U1RRK4 108 aa-0.02□□□□□ -2.41
SCAF11-215ENST00000551391 PGRMC1O00264 195 aaKnown RBP-0.02□□□□□ -2.41
SCAF11-215ENST00000551391 CRYGSP22914 178 aa-0.02□□□□□ -2.41
SCAF11-215ENST00000551391 LSM3P62310 102 aaKnown RBP-0.02□□□□□ -2.41
SCAF11-215ENST00000551391 BLCAPP62952 87 aa-0.02□□□□□ -2.41
SCAF11-215ENST00000551391 KLKP1Q107X0 134 aa-0.02□□□□□ -2.41
SCAF11-215ENST00000551391 PPP1R2P3Q6NXS1 205 aa-0.02□□□□□ -2.41
SCAF11-215ENST00000551391 LYPD5Q6UWN5 251 aa-0.02□□□□□ -2.41
SCAF11-215ENST00000551391 SMIM7Q9BQ49 75 aa-0.02□□□□□ -2.41
SCAF11-215ENST00000551391 CBLN4Q9NTU7 201 aa-0.02□□□□□ -2.41
SCAF11-215ENST00000551391 TRPM7Q96QT4 1865 aa-0.02□□□□□ -2.41
SCAF11-215ENST00000551391 RBBP6Q7Z6E9 1792 aaKnown RBP-0.02□□□□□ -2.41
SCAF11-215ENST00000551391 TANC2Q9HCD6 1990 aa-0.03□□□□□ -2.41
SCAF11-215ENST00000551391 PTPRGP23470 1445 aa-0.03□□□□□ -2.41
SCAF11-215ENST00000551391 BLMP54132 1417 aaPredicted RBP-0.03□□□□□ -2.41
SCAF11-215ENST00000551391 FXYD1O00168 92 aa-0.03□□□□□ -2.41
SCAF11-215ENST00000551391 RHOHQ15669 191 aa-0.03□□□□□ -2.41
SCAF11-215ENST00000551391 Q5XG85 94 aa-0.03□□□□□ -2.41
SCAF11-215ENST00000551391 SMPXQ9UHP9 88 aa-0.03□□□□□ -2.41
SCAF11-215ENST00000551391 A0A0G2JMM0 328 aa-0.04□□□□□ -2.42
SCAF11-215ENST00000551391 CDC42EP2O14613 210 aa-0.04□□□□□ -2.42
SCAF11-215ENST00000551391 HBDP02042 147 aa-0.04□□□□□ -2.42
SCAF11-215ENST00000551391 TOMM20LQ6UXN7 152 aa-0.04□□□□□ -2.42
SCAF11-215ENST00000551391 IDO2Q6ZQW0 420 aa-0.04□□□□□ -2.42
SCAF11-215ENST00000551391 OR5A2Q8NGI9 324 aa-0.04□□□□□ -2.42
SCAF11-215ENST00000551391 TMEM14BQ9NUH8 114 aa-0.04□□□□□ -2.42
SCAF11-215ENST00000551391 FER1L6Q2WGJ9 1857 aa-0.04□□□□□ -2.42
SCAF11-215ENST00000551391 AFDNP55196 1824 aaKnown RBP-0.04□□□□□ -2.42
SCAF11-215ENST00000551391 PTPRZ1P23471 2315 aaPredicted RBP-0.04□□□□□ -2.42
SCAF11-215ENST00000551391 SYNE2Q8WXH0 6885 aaKnown RBP-0.05□□□□□ -2.42
SCAF11-215ENST00000551391 TTC28Q96AY4 2481 aa-0.05□□□□□ -2.42
SCAF11-215ENST00000551391 IGKCP01834 107 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms