RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 LYRM2Q9NU23 88 aaPredicted RBP5.23□□□□□ -1.57
NEK3-201ENST00000550331 FUT9Q9Y231 359 aa5.23□□□□□ -1.57
NEK3-201ENST00000550331 TIMM9Q9Y5J7 89 aa5.23□□□□□ -1.57
NEK3-201ENST00000550331 SRRM2Q9UQ35 2752 aaKnown RBP5.22□□□□□ -1.57
NEK3-201ENST00000550331 TRAV6A0A075B6T7 132 aa5.22□□□□□ -1.57
NEK3-201ENST00000550331 TRGV1A0A0A0MS02 117 aa5.22□□□□□ -1.57
NEK3-201ENST00000550331 IGSF23A1L1A6 192 aa5.22□□□□□ -1.57
NEK3-201ENST00000550331 C5orf51A6NDU8 294 aa5.22□□□□□ -1.57
NEK3-201ENST00000550331 SIVA1O15304 175 aa5.22□□□□□ -1.57
NEK3-201ENST00000550331 LYRM1O43325 122 aa5.22□□□□□ -1.57
NEK3-201ENST00000550331 TCRBP04435 133 aa5.22□□□□□ -1.57
NEK3-201ENST00000550331 GPX1P07203 203 aa5.22□□□□□ -1.57
NEK3-201ENST00000550331 SLAQ13239 276 aa5.22□□□□□ -1.57
NEK3-201ENST00000550331 BTN1A1Q13410 526 aa5.22□□□□□ -1.57
NEK3-201ENST00000550331 ATP6V1FQ16864 119 aa5.22□□□□□ -1.57
NEK3-201ENST00000550331 VGLL1Q99990 258 aa5.22□□□□□ -1.57
NEK3-201ENST00000550331 KRTAP3-1Q9BYR8 98 aa5.22□□□□□ -1.57
NEK3-201ENST00000550331 NUDT15Q9NV35 164 aa5.22□□□□□ -1.57
NEK3-201ENST00000550331 PRO0255Q9UI72 69 aa5.22□□□□□ -1.57
NEK3-201ENST00000550331 KLF12Q9Y4X4 402 aa5.22□□□□□ -1.57
NEK3-201ENST00000550331 ICOSQ9Y6W8 199 aa5.22□□□□□ -1.57
NEK3-201ENST00000550331 TRBV7-9A0A0J9YWB2 115 aa5.21□□□□□ -1.58
NEK3-201ENST00000550331 NXPH4O95158 308 aa5.21□□□□□ -1.58
NEK3-201ENST00000550331 PYYP10082 97 aa5.21□□□□□ -1.58
NEK3-201ENST00000550331 FGF7P21781 194 aa5.21□□□□□ -1.58
NEK3-201ENST00000550331 RNASE4P34096 147 aaKnown RBP5.21□□□□□ -1.58
NEK3-201ENST00000550331 S100A10P60903 97 aa5.21□□□□□ -1.58
NEK3-201ENST00000550331 ERCC8Q13216 396 aa5.21□□□□□ -1.58
NEK3-201ENST00000550331 IL15RAQ13261 267 aa5.21□□□□□ -1.58
NEK3-201ENST00000550331 RAB32Q13637 225 aa5.21□□□□□ -1.58
NEK3-201ENST00000550331 ICAM4Q14773 271 aa5.21□□□□□ -1.58
NEK3-201ENST00000550331 TMEM78Q5T7P6 136 aa5.21□□□□□ -1.58
NEK3-201ENST00000550331 EXOC3-AS1Q8N2X6 119 aa5.21□□□□□ -1.58
NEK3-201ENST00000550331 ZFAND2AQ8N6M9 145 aa5.21□□□□□ -1.58
NEK3-201ENST00000550331 BLNKQ8WV28 456 aa5.21□□□□□ -1.58
NEK3-201ENST00000550331 SEC22CQ9BRL7 303 aa5.21□□□□□ -1.58
NEK3-201ENST00000550331 NPCDR1Q9BY65 106 aa5.21□□□□□ -1.58
NEK3-201ENST00000550331 PTTG2Q9NZH5 202 aa5.21□□□□□ -1.58
NEK3-201ENST00000550331 ZNF492Q9P255 531 aa5.21□□□□□ -1.58
NEK3-201ENST00000550331 HMCN2Q8NDA2 5059 aa5.21□□□□□ -1.58
NEK3-201ENST00000550331 IGHV1OR15-1A0A075B7D0 117 aa5.2□□□□□ -1.58
NEK3-201ENST00000550331 IGKV2-40A0A087WW87 121 aaPredicted RBP5.2□□□□□ -1.58
NEK3-201ENST00000550331 K7EP13 123 aa5.2□□□□□ -1.58
NEK3-201ENST00000550331 RGS13O14921 159 aa5.2□□□□□ -1.58
NEK3-201ENST00000550331 IGKV2D-40P01614 121 aaPredicted RBP5.2□□□□□ -1.58
NEK3-201ENST00000550331 CRYBA4P53673 196 aa5.2□□□□□ -1.58
NEK3-201ENST00000550331 ERVFC1-1P60608 527 aa5.2□□□□□ -1.58
NEK3-201ENST00000550331 ZNF415Q09FC8 603 aa5.2□□□□□ -1.58
NEK3-201ENST00000550331 MRPL23Q16540 153 aaKnown RBP5.2□□□□□ -1.58
NEK3-201ENST00000550331 GCSAMLQ5JQS6 135 aa5.2□□□□□ -1.58
NEK3-201ENST00000550331 PRR9Q5T870 116 aa5.2□□□□□ -1.58
NEK3-201ENST00000550331 NEGR1Q7Z3B1 354 aa5.2□□□□□ -1.58
NEK3-201ENST00000550331 NFE4Q86UQ8 179 aa5.2□□□□□ -1.58
NEK3-201ENST00000550331 FAM167A-AS1Q96KT0 104 aa5.2□□□□□ -1.58
NEK3-201ENST00000550331 SLC25A2Q9BXI2 301 aa5.2□□□□□ -1.58
NEK3-201ENST00000550331 MRPL32Q9BYC8 188 aaKnown RBP5.2□□□□□ -1.58
NEK3-201ENST00000550331 GPN1Q9HCN4 374 aaPredicted RBP5.2□□□□□ -1.58
NEK3-201ENST00000550331 KCNIP2Q9NS61 270 aa5.2□□□□□ -1.58
NEK3-201ENST00000550331 TRAV9-2A0A087WT02 112 aa5.19□□□□□ -1.58
NEK3-201ENST00000550331 RBAKDNA6NC62 111 aa5.19□□□□□ -1.58
NEK3-201ENST00000550331 IGHV3-53P01767 116 aa5.19□□□□□ -1.58
NEK3-201ENST00000550331 NBEAP1P0C6P0 100 aa5.19□□□□□ -1.58
NEK3-201ENST00000550331 ZNF138P52744 262 aa5.19□□□□□ -1.58
NEK3-201ENST00000550331 FHL2Q14192 279 aa5.19□□□□□ -1.58
NEK3-201ENST00000550331 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.19□□□□□ -1.58
NEK3-201ENST00000550331 FAM122CQ6P4D5 195 aa5.19□□□□□ -1.58
NEK3-201ENST00000550331 LYPD5Q6UWN5 251 aa5.19□□□□□ -1.58
NEK3-201ENST00000550331 MIR17HGQ75NE6 70 aa5.19□□□□□ -1.58
NEK3-201ENST00000550331 IQCF2Q8IXL9 164 aa5.19□□□□□ -1.58
NEK3-201ENST00000550331 CCDC32Q9BV29 185 aa5.19□□□□□ -1.58
NEK3-201ENST00000550331 OR51M1Q9H341 326 aa5.19□□□□□ -1.58
NEK3-201ENST00000550331 MRPL16Q9NX20 251 aaKnown RBP5.19□□□□□ -1.58
NEK3-201ENST00000550331 TP53TG3Q9ULZ0 132 aa5.19□□□□□ -1.58
NEK3-201ENST00000550331 HHLA3Q9XRX5 114 aa5.19□□□□□ -1.58
NEK3-201ENST00000550331 A0A087WTM6 91 aa5.18□□□□□ -1.58
NEK3-201ENST00000550331 FAM240BA0A1B0GVZ2 78 aa5.18□□□□□ -1.58
NEK3-201ENST00000550331 CSN1S1P47710 185 aa5.18□□□□□ -1.58
NEK3-201ENST00000550331 ZNF266Q14584 549 aa5.18□□□□□ -1.58
NEK3-201ENST00000550331 Q5VSD8 79 aa5.18□□□□□ -1.58
NEK3-201ENST00000550331 LYPD1Q8N2G4 141 aa5.18□□□□□ -1.58
NEK3-201ENST00000550331 OR5C1Q8NGR4 320 aa5.18□□□□□ -1.58
NEK3-201ENST00000550331 Q8TAT8 98 aa5.18□□□□□ -1.58
NEK3-201ENST00000550331 THAP6Q8TBB0 222 aa5.18□□□□□ -1.58
NEK3-201ENST00000550331 PCNPQ8WW12 178 aaKnown RBP5.18□□□□□ -1.58
NEK3-201ENST00000550331 FRZBQ92765 325 aa5.18□□□□□ -1.58
NEK3-201ENST00000550331 FXYD5Q96DB9 178 aa5.18□□□□□ -1.58
NEK3-201ENST00000550331 C8orf49Q96NF6 230 aa5.18□□□□□ -1.58
NEK3-201ENST00000550331 PAXXQ9BUH6 204 aa5.18□□□□□ -1.58
NEK3-201ENST00000550331 WDR61Q9GZS3 305 aaKnown RBP5.18□□□□□ -1.58
NEK3-201ENST00000550331 SLC25A31Q9H0C2 315 aa5.18□□□□□ -1.58
NEK3-201ENST00000550331 LY96Q9Y6Y9 160 aa5.18□□□□□ -1.58
NEK3-201ENST00000550331 TRGV11A0A075B6L2 103 aa5.17□□□□□ -1.58
NEK3-201ENST00000550331 TRGV4A0A0C4DH28 118 aa5.17□□□□□ -1.58
NEK3-201ENST00000550331 E5RGE8 158 aa5.17□□□□□ -1.58
NEK3-201ENST00000550331 K7EQD1 137 aa5.17□□□□□ -1.58
NEK3-201ENST00000550331 PRAF2O60831 178 aa5.17□□□□□ -1.58
NEK3-201ENST00000550331 ORM1P02763 201 aa5.17□□□□□ -1.58
NEK3-201ENST00000550331 EVI2AP22794 236 aa5.17□□□□□ -1.58
NEK3-201ENST00000550331 SRIP30626 198 aa5.17□□□□□ -1.58
NEK3-201ENST00000550331 NHLH2Q02577 135 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms