RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 FXYD5Q96DB9 178 aa5.65□□□□□ -1.5
SMARCD1-207ENST00000549526 UPK3BQ9BT76 320 aa5.65□□□□□ -1.5
SMARCD1-207ENST00000549526 IGKV2-40A0A087WW87 121 aaPredicted RBP5.64□□□□□ -1.51
SMARCD1-207ENST00000549526 FXYD6-FXYD2A0A087WZ82 144 aa5.64□□□□□ -1.51
SMARCD1-207ENST00000549526 A0A1W2PPV4 95 aa5.64□□□□□ -1.51
SMARCD1-207ENST00000549526 RS1O15537 224 aa5.64□□□□□ -1.51
SMARCD1-207ENST00000549526 EIF3GO75821 320 aaKnown RBP eCLIP5.64□□□□□ -1.51
SMARCD1-207ENST00000549526 IGKV2D-40P01614 121 aaPredicted RBP5.64□□□□□ -1.51
SMARCD1-207ENST00000549526 CT45A10P0DMU9 189 aa5.64□□□□□ -1.51
SMARCD1-207ENST00000549526 DEFB130BP0DP73 79 aa5.64□□□□□ -1.51
SMARCD1-207ENST00000549526 DEFB130AP0DP74 79 aa5.64□□□□□ -1.51
SMARCD1-207ENST00000549526 AZU1P20160 251 aa5.64□□□□□ -1.51
SMARCD1-207ENST00000549526 M6PRP20645 277 aa5.64□□□□□ -1.51
SMARCD1-207ENST00000549526 TAS2R60P59551 318 aa5.64□□□□□ -1.51
SMARCD1-207ENST00000549526 RAB2AP61019 212 aa5.64□□□□□ -1.51
SMARCD1-207ENST00000549526 ACOT6Q3I5F7 207 aaPredicted RBP5.64□□□□□ -1.51
SMARCD1-207ENST00000549526 GFI1BQ5VTD9 330 aa5.64□□□□□ -1.51
SMARCD1-207ENST00000549526 NFE4Q86UQ8 179 aa5.64□□□□□ -1.51
SMARCD1-207ENST00000549526 HSD17B11Q8NBQ5 300 aa5.64□□□□□ -1.51
SMARCD1-207ENST00000549526 INO80EQ8NBZ0 244 aaPredicted RBP5.64□□□□□ -1.51
SMARCD1-207ENST00000549526 ASB13Q8WXK3 278 aa5.64□□□□□ -1.51
SMARCD1-207ENST00000549526 PHYHIPLQ96FC7 376 aa5.64□□□□□ -1.51
SMARCD1-207ENST00000549526 AQP10Q96PS8 301 aa5.64□□□□□ -1.51
SMARCD1-207ENST00000549526 ODF3Q96PU9 254 aa5.64□□□□□ -1.51
SMARCD1-207ENST00000549526 TRAV12-3A0A0B4J271 114 aa5.63□□□□□ -1.51
SMARCD1-207ENST00000549526 LYRM9A8MSI8 78 aa5.63□□□□□ -1.51
SMARCD1-207ENST00000549526 H7BYZ3 331 aa5.63□□□□□ -1.51
SMARCD1-207ENST00000549526 MT1HL1P0DM35 61 aa5.63□□□□□ -1.51
SMARCD1-207ENST00000549526 CSN1S1P47710 185 aa5.63□□□□□ -1.51
SMARCD1-207ENST00000549526 KRTAP10-4P60372 401 aaPredicted RBP5.63□□□□□ -1.51
SMARCD1-207ENST00000549526 RANP62826 216 aaKnown RBP5.63□□□□□ -1.51
SMARCD1-207ENST00000549526 ESRGQ1W209 222 aa5.63□□□□□ -1.51
SMARCD1-207ENST00000549526 TMEM78Q5T7P6 136 aa5.63□□□□□ -1.51
SMARCD1-207ENST00000549526 CCDC28AQ8IWP9 274 aa5.63□□□□□ -1.51
SMARCD1-207ENST00000549526 OR10G4Q8NGN3 311 aa5.63□□□□□ -1.51
SMARCD1-207ENST00000549526 OR10G9Q8NGN4 311 aa5.63□□□□□ -1.51
SMARCD1-207ENST00000549526 OR10G7Q8NGN6 311 aa5.63□□□□□ -1.51
SMARCD1-207ENST00000549526 OR2T35Q8NGX2 323 aa5.63□□□□□ -1.51
SMARCD1-207ENST00000549526 C16orf74Q96GX8 76 aa5.63□□□□□ -1.51
SMARCD1-207ENST00000549526 LINC00477Q96M19 166 aa5.63□□□□□ -1.51
SMARCD1-207ENST00000549526 C20orf144Q9BQM9 153 aa5.63□□□□□ -1.51
SMARCD1-207ENST00000549526 AGPAT4-IT1Q9H0P7 198 aa5.63□□□□□ -1.51
SMARCD1-207ENST00000549526 PLAC8L1A1L4L8 177 aa5.62□□□□□ -1.51
SMARCD1-207ENST00000549526 C7orf71A4D174 169 aa5.62□□□□□ -1.51
SMARCD1-207ENST00000549526 HMGB3O15347 200 aaKnown RBP5.62□□□□□ -1.51
SMARCD1-207ENST00000549526 SLC25A5P05141 298 aaKnown RBP5.62□□□□□ -1.51
SMARCD1-207ENST00000549526 ATP6V0CP27449 155 aa5.62□□□□□ -1.51
SMARCD1-207ENST00000549526 CDC34P49427 236 aaPredicted RBP5.62□□□□□ -1.51
SMARCD1-207ENST00000549526 BTN1A1Q13410 526 aa5.62□□□□□ -1.51
SMARCD1-207ENST00000549526 PQLC2Q6ZP29 291 aa5.62□□□□□ -1.51
SMARCD1-207ENST00000549526 C9orf47Q6ZRZ4 202 aa5.62□□□□□ -1.51
SMARCD1-207ENST00000549526 TMEM263Q8WUH6 116 aaKnown RBP5.62□□□□□ -1.51
SMARCD1-207ENST00000549526 HYLS1Q96M11 299 aa5.62□□□□□ -1.51
SMARCD1-207ENST00000549526 NOP10Q9NPE3 64 aaKnown RBP5.62□□□□□ -1.51
SMARCD1-207ENST00000549526 RPH3ALQ9UNE2 315 aa5.62□□□□□ -1.51
SMARCD1-207ENST00000549526 MRPS16Q9Y3D3 137 aaKnown RBP5.62□□□□□ -1.51
SMARCD1-207ENST00000549526 TIMM8BQ9Y5J9 83 aaPredicted RBP5.62□□□□□ -1.51
SMARCD1-207ENST00000549526 BORCS7-ASMTA0A0B4J1R7 106 aa5.61□□□□□ -1.51
SMARCD1-207ENST00000549526 RNF222A6NCQ9 220 aa5.61□□□□□ -1.51
SMARCD1-207ENST00000549526 SNURFLB1AK76 121 aa5.61□□□□□ -1.51
SMARCD1-207ENST00000549526 C1QBP02746 253 aa5.61□□□□□ -1.51
SMARCD1-207ENST00000549526 ATP5G1P05496 136 aa5.61□□□□□ -1.51
SMARCD1-207ENST00000549526 GPX1P07203 203 aa5.61□□□□□ -1.51
SMARCD1-207ENST00000549526 RNASE4P34096 147 aaKnown RBP5.61□□□□□ -1.51
SMARCD1-207ENST00000549526 ATP5G3P48201 142 aa5.61□□□□□ -1.51
SMARCD1-207ENST00000549526 CD300CQ08708 224 aa5.61□□□□□ -1.51
SMARCD1-207ENST00000549526 ZNF493Q6ZR52 646 aa5.61□□□□□ -1.51
SMARCD1-207ENST00000549526 OR2G3Q8NGZ4 309 aa5.61□□□□□ -1.51
SMARCD1-207ENST00000549526 Q8TAT8 98 aa5.61□□□□□ -1.51
SMARCD1-207ENST00000549526 CMTM2Q8TAZ6 248 aa5.61□□□□□ -1.51
SMARCD1-207ENST00000549526 RNASE8Q8TDE3 154 aaKnown RBP5.61□□□□□ -1.51
SMARCD1-207ENST00000549526 VGLL1Q99990 258 aa5.61□□□□□ -1.51
SMARCD1-207ENST00000549526 PYGO2Q9BRQ0 406 aa5.61□□□□□ -1.51
SMARCD1-207ENST00000549526 PSMG3Q9BT73 122 aaPredicted RBP5.61□□□□□ -1.51
SMARCD1-207ENST00000549526 SH3BGRL3Q9H299 93 aa5.61□□□□□ -1.51
SMARCD1-207ENST00000549526 ZNF492Q9P255 531 aa5.61□□□□□ -1.51
SMARCD1-207ENST00000549526 TNFSF18Q9UNG2 199 aa5.61□□□□□ -1.51
SMARCD1-207ENST00000549526 PGPA6NDG6 321 aa5.6□□□□□ -1.51
SMARCD1-207ENST00000549526 CBY3A6NI87 242 aa5.6□□□□□ -1.51
SMARCD1-207ENST00000549526 KLLNB2CW77 178 aa5.6□□□□□ -1.51
SMARCD1-207ENST00000549526 SMLR1H3BR10 107 aa5.6□□□□□ -1.51
SMARCD1-207ENST00000549526 ARPC5O15511 151 aa5.6□□□□□ -1.51
SMARCD1-207ENST00000549526 MBP02144 154 aa5.6□□□□□ -1.51
SMARCD1-207ENST00000549526 ARL14EPLP0DKL9 152 aa5.6□□□□□ -1.51
SMARCD1-207ENST00000549526 CRISP2P16562 243 aa5.6□□□□□ -1.51
SMARCD1-207ENST00000549526 ZNF138P52744 262 aa5.6□□□□□ -1.51
SMARCD1-207ENST00000549526 SERF2P84101 59 aa5.6□□□□□ -1.51
SMARCD1-207ENST00000549526 FAM74A1Q5RGS3 127 aa5.6□□□□□ -1.51
SMARCD1-207ENST00000549526 RPL7L1Q6DKI1 246 aaKnown RBP5.6□□□□□ -1.51
SMARCD1-207ENST00000549526 RXFP4Q8TDU9 374 aa5.6□□□□□ -1.51
SMARCD1-207ENST00000549526 NTN5Q8WTR8 489 aaPredicted RBP5.6□□□□□ -1.51
SMARCD1-207ENST00000549526 GNPNAT1Q96EK6 184 aaPredicted RBP5.6□□□□□ -1.51
SMARCD1-207ENST00000549526 FAM19A4Q96LR4 140 aa5.6□□□□□ -1.51
SMARCD1-207ENST00000549526 OTORQ9NRC9 128 aa5.6□□□□□ -1.51
SMARCD1-207ENST00000549526 A0A0U1RQV1 116 aa5.59□□□□□ -1.51
SMARCD1-207ENST00000549526 RBAKDNA6NC62 111 aa5.59□□□□□ -1.51
SMARCD1-207ENST00000549526 DIRC3C9JPN6 131 aa5.59□□□□□ -1.51
SMARCD1-207ENST00000549526 G3V3Q6 166 aa5.59□□□□□ -1.51
SMARCD1-207ENST00000549526 RGS13O14921 159 aa5.59□□□□□ -1.51
SMARCD1-207ENST00000549526 SIVA1O15304 175 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms