RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 ERCC8Q13216 396 aa7.18□□□□□ -1.26
SMARCD1-206ENST00000549274 ZNF124Q15973 351 aa7.18□□□□□ -1.26
SMARCD1-206ENST00000549274 AMTNQ6UX39 209 aa7.18□□□□□ -1.26
SMARCD1-206ENST00000549274 LINC00322Q6ZN03 302 aaPredicted RBP7.18□□□□□ -1.26
SMARCD1-206ENST00000549274 COX8CQ7Z4L0 72 aa7.18□□□□□ -1.26
SMARCD1-206ENST00000549274 BAGE2Q86Y30 109 aa7.18□□□□□ -1.26
SMARCD1-206ENST00000549274 PCNPQ8WW12 178 aaKnown RBP7.18□□□□□ -1.26
SMARCD1-206ENST00000549274 FAM19A4Q96LR4 140 aa7.18□□□□□ -1.26
SMARCD1-206ENST00000549274 ASCL2Q99929 193 aa7.18□□□□□ -1.26
SMARCD1-206ENST00000549274 RARRES2Q99969 163 aa7.18□□□□□ -1.26
SMARCD1-206ENST00000549274 ZMAT4Q9H898 229 aa7.18□□□□□ -1.26
SMARCD1-206ENST00000549274 TRAV21A0A0B4J279 112 aa7.17□□□□□ -1.26
SMARCD1-206ENST00000549274 SMIM9A6NGZ8 99 aa7.17□□□□□ -1.26
SMARCD1-206ENST00000549274 SRP19P09132 144 aaKnown RBP7.17□□□□□ -1.26
SMARCD1-206ENST00000549274 NHLRC4P0CG21 123 aaPredicted RBP7.17□□□□□ -1.26
SMARCD1-206ENST00000549274 ZNF705DP0CH99 300 aaPredicted RBP7.17□□□□□ -1.26
SMARCD1-206ENST00000549274 ZNF705BP0CI00 300 aaPredicted RBP7.17□□□□□ -1.26
SMARCD1-206ENST00000549274 DEFA6Q01524 100 aa7.17□□□□□ -1.26
SMARCD1-206ENST00000549274 SPINK13Q1W4C9 94 aa7.17□□□□□ -1.26
SMARCD1-206ENST00000549274 SOHLH1Q5JUK2 328 aa7.17□□□□□ -1.26
SMARCD1-206ENST00000549274 COMMD7Q86VX2 200 aa7.17□□□□□ -1.26
SMARCD1-206ENST00000549274 TMEM183AQ8IXX5 376 aa7.17□□□□□ -1.26
SMARCD1-206ENST00000549274 RCHY1Q96PM5 261 aa7.17□□□□□ -1.26
SMARCD1-206ENST00000549274 B9D2Q9BPU9 175 aa7.17□□□□□ -1.26
SMARCD1-206ENST00000549274 SMIM7Q9BQ49 75 aa7.17□□□□□ -1.26
SMARCD1-206ENST00000549274 SPATA25Q9BR10 227 aa7.17□□□□□ -1.26
SMARCD1-206ENST00000549274 PYGO2Q9BRQ0 406 aa7.17□□□□□ -1.26
SMARCD1-206ENST00000549274 TMEM208Q9BTX3 173 aa7.17□□□□□ -1.26
SMARCD1-206ENST00000549274 PARLQ9H300 379 aa7.17□□□□□ -1.26
SMARCD1-206ENST00000549274 TRAV8-1A0A0A6YYK1 113 aa7.16□□□□□ -1.26
SMARCD1-206ENST00000549274 TRAV34A0A0B4J273 112 aa7.16□□□□□ -1.26
SMARCD1-206ENST00000549274 FABP5P3A8MUU1 101 aa7.16□□□□□ -1.26
SMARCD1-206ENST00000549274 ZNF727A8MUV8 499 aa7.16□□□□□ -1.26
SMARCD1-206ENST00000549274 H7BYZ3 331 aa7.16□□□□□ -1.26
SMARCD1-206ENST00000549274 M0R2Z0 102 aa7.16□□□□□ -1.26
SMARCD1-206ENST00000549274 IGLV2-11P01706 119 aa7.16□□□□□ -1.26
SMARCD1-206ENST00000549274 CEBPGP53567 150 aa7.16□□□□□ -1.26
SMARCD1-206ENST00000549274 DEFB1P60022 68 aa7.16□□□□□ -1.26
SMARCD1-206ENST00000549274 CENPWQ5EE01 88 aa7.16□□□□□ -1.26
SMARCD1-206ENST00000549274 FAM162BQ5T6X4 162 aa7.16□□□□□ -1.26
SMARCD1-206ENST00000549274 Q6AWC8 147 aa7.16□□□□□ -1.26
SMARCD1-206ENST00000549274 Q8TAT8 98 aa7.16□□□□□ -1.26
SMARCD1-206ENST00000549274 KCNS1Q96KK3 526 aa7.16□□□□□ -1.26
SMARCD1-206ENST00000549274 XCL2Q9UBD3 114 aa7.16□□□□□ -1.26
SMARCD1-206ENST00000549274 XKRY2A2RUG3 117 aa7.15□□□□□ -1.26
SMARCD1-206ENST00000549274 TMEM189A5PLL7 270 aa7.15□□□□□ -1.26
SMARCD1-206ENST00000549274 PFN1P07737 140 aaKnown RBP7.15□□□□□ -1.26
SMARCD1-206ENST00000549274 PNRC1Q12796 327 aaPredicted RBP7.15□□□□□ -1.26
SMARCD1-206ENST00000549274 ZNF674Q2M3X9 581 aa7.15□□□□□ -1.26
SMARCD1-206ENST00000549274 ZFAND2AQ8N6M9 145 aa7.15□□□□□ -1.26
SMARCD1-206ENST00000549274 DAZAP1Q96EP5 407 aaKnown RBP7.15□□□□□ -1.26
SMARCD1-206ENST00000549274 NEU1Q99519 415 aa7.15□□□□□ -1.26
SMARCD1-206ENST00000549274 LINC00467Q9BRT7 94 aa7.15□□□□□ -1.26
SMARCD1-206ENST00000549274 TEX48A0A1B0GUV7 120 aa7.14□□□□□ -1.27
SMARCD1-206ENST00000549274 SPRY2O43597 315 aa7.14□□□□□ -1.27
SMARCD1-206ENST00000549274 GCGP01275 180 aa7.14□□□□□ -1.27
SMARCD1-206ENST00000549274 PRB2P02812 416 aaPredicted RBP7.14□□□□□ -1.27
SMARCD1-206ENST00000549274 RNASE4P34096 147 aaKnown RBP7.14□□□□□ -1.27
SMARCD1-206ENST00000549274 TMEM241Q24JQ0 296 aa7.14□□□□□ -1.27
SMARCD1-206ENST00000549274 GFI1BQ5VTD9 330 aa7.14□□□□□ -1.27
SMARCD1-206ENST00000549274 FAM159AQ6UWV7 190 aa7.14□□□□□ -1.27
SMARCD1-206ENST00000549274 ZNF493Q6ZR52 646 aa7.14□□□□□ -1.27
SMARCD1-206ENST00000549274 RNF183Q96D59 192 aa7.14□□□□□ -1.27
SMARCD1-206ENST00000549274 LINC00479Q96M42 142 aa7.14□□□□□ -1.27
SMARCD1-206ENST00000549274 MLST8Q9BVC4 326 aa7.14□□□□□ -1.27
SMARCD1-206ENST00000549274 NAT8Q9UHE5 227 aa7.14□□□□□ -1.27
SMARCD1-206ENST00000549274 TRGV11A0A075B6L2 103 aa7.13□□□□□ -1.27
SMARCD1-206ENST00000549274 CRXO43186 299 aaPredicted RBP7.13□□□□□ -1.27
SMARCD1-206ENST00000549274 SFTA3P0C7M3 94 aa7.13□□□□□ -1.27
SMARCD1-206ENST00000549274 MGST1P10620 155 aaKnown RBP7.13□□□□□ -1.27
SMARCD1-206ENST00000549274 MIFP14174 115 aa7.13□□□□□ -1.27
SMARCD1-206ENST00000549274 RPS20P60866 119 aaKnown RBP7.13□□□□□ -1.27
SMARCD1-206ENST00000549274 RRN3P1Q2M238 152 aa7.13□□□□□ -1.27
SMARCD1-206ENST00000549274 DEFB135Q30KP9 77 aa7.13□□□□□ -1.27
SMARCD1-206ENST00000549274 ZNF705AQ6ZN79 300 aaPredicted RBP7.13□□□□□ -1.27
SMARCD1-206ENST00000549274 SGK494Q96LW2 274 aa7.13□□□□□ -1.27
SMARCD1-206ENST00000549274 LINC01587Q99440 93 aa7.13□□□□□ -1.27
SMARCD1-206ENST00000549274 TM2D3Q9BRN9 247 aa7.13□□□□□ -1.27
SMARCD1-206ENST00000549274 DERL1Q9BUN8 251 aa7.13□□□□□ -1.27
SMARCD1-206ENST00000549274 SEC11CQ9BY50 192 aa7.13□□□□□ -1.27
SMARCD1-206ENST00000549274 SDF2L1Q9HCN8 221 aa7.13□□□□□ -1.27
SMARCD1-206ENST00000549274 TRAV12-2A0A075B6T6 113 aa7.12□□□□□ -1.27
SMARCD1-206ENST00000549274 IGHV1OR15-1A0A075B7D0 117 aa7.12□□□□□ -1.27
SMARCD1-206ENST00000549274 TRAV12-3A0A0B4J271 114 aa7.12□□□□□ -1.27
SMARCD1-206ENST00000549274 TMEM218A2RU14 115 aa7.12□□□□□ -1.27
SMARCD1-206ENST00000549274 KRBOX1C9JBD0 128 aa7.12□□□□□ -1.27
SMARCD1-206ENST00000549274 CXCL1P09341 107 aa7.12□□□□□ -1.27
SMARCD1-206ENST00000549274 FXYD7P58549 80 aa7.12□□□□□ -1.27
SMARCD1-206ENST00000549274 BTN1A1Q13410 526 aa7.12□□□□□ -1.27
SMARCD1-206ENST00000549274 TDRG1Q3Y452 100 aa7.12□□□□□ -1.27
SMARCD1-206ENST00000549274 ANXA2RQ3ZCQ2 193 aa7.12□□□□□ -1.27
SMARCD1-206ENST00000549274 IBA57Q5T440 356 aaKnown RBP7.12□□□□□ -1.27
SMARCD1-206ENST00000549274 C15orf54Q8N8G6 183 aa7.12□□□□□ -1.27
SMARCD1-206ENST00000549274 CSNK1G2-AS1Q8NCQ2 148 aa7.12□□□□□ -1.27
SMARCD1-206ENST00000549274 TVP23CQ96ET8 276 aa7.12□□□□□ -1.27
SMARCD1-206ENST00000549274 C16orf74Q96GX8 76 aa7.12□□□□□ -1.27
SMARCD1-206ENST00000549274 ZC2HC1AQ96GY0 325 aa7.12□□□□□ -1.27
SMARCD1-206ENST00000549274 F8W036 122 aa7.11□□□□□ -1.27
SMARCD1-206ENST00000549274 ZNF324O75467 553 aaPredicted RBP7.11□□□□□ -1.27
SMARCD1-206ENST00000549274 P01737 135 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 167 ms