RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 SMUG1Q53HV7 270 aa3.53□□□□□ -1.84
SCAF11-212ENST00000549162 C1QTNF4Q9BXJ3 329 aa3.53□□□□□ -1.84
SCAF11-212ENST00000549162 LSM5Q9Y4Y9 91 aaKnown RBP3.53□□□□□ -1.84
SCAF11-212ENST00000549162 PTPRQQ9UMZ3 2332 aa3.53□□□□□ -1.85
SCAF11-212ENST00000549162 MYO15AQ9UKN7 3530 aa3.52□□□□□ -1.85
SCAF11-212ENST00000549162 IGHV3-16A0A0C4DH30 117 aa3.52□□□□□ -1.85
SCAF11-212ENST00000549162 UBE2L5PA0A1B0GUS4 154 aa3.52□□□□□ -1.85
SCAF11-212ENST00000549162 GNG10P50151 68 aa3.52□□□□□ -1.85
SCAF11-212ENST00000549162 UNQ5815/PRO19632Q6UWF5 114 aa3.52□□□□□ -1.85
SCAF11-212ENST00000549162 TMEM136Q6ZRR5 245 aa3.52□□□□□ -1.85
SCAF11-212ENST00000549162 RNF185Q96GF1 192 aa3.52□□□□□ -1.85
SCAF11-212ENST00000549162 RPP21Q9H633 154 aaKnown RBP3.52□□□□□ -1.85
SCAF11-212ENST00000549162 IGSF10Q6WRI0 2623 aa3.52□□□□□ -1.85
SCAF11-212ENST00000549162 KALRNO60229 2985 aa3.52□□□□□ -1.85
SCAF11-212ENST00000549162 FXYD6-FXYD2A0A087WZ82 144 aa3.52□□□□□ -1.85
SCAF11-212ENST00000549162 OR4C46A6NHA9 309 aa3.52□□□□□ -1.85
SCAF11-212ENST00000549162 G3V4G9 280 aa3.52□□□□□ -1.85
SCAF11-212ENST00000549162 HLA-DQA1P01909 254 aa3.52□□□□□ -1.85
SCAF11-212ENST00000549162 IL1F10Q8WWZ1 152 aa3.52□□□□□ -1.85
SCAF11-212ENST00000549162 NAT8BQ9UHF3 227 aa3.52□□□□□ -1.85
SCAF11-212ENST00000549162 PAM16Q9Y3D7 125 aa3.52□□□□□ -1.85
SCAF11-212ENST00000549162 MALRD1Q5VYJ5 2156 aa3.52□□□□□ -1.85
SCAF11-212ENST00000549162 MIFP14174 115 aa3.52□□□□□ -1.85
SCAF11-212ENST00000549162 Q71RC1 249 aaPredicted RBP3.52□□□□□ -1.85
SCAF11-212ENST00000549162 OR8A1Q8NGG7 326 aa3.52□□□□□ -1.85
SCAF11-212ENST00000549162 OR2T6Q8NHC8 308 aa3.52□□□□□ -1.85
SCAF11-212ENST00000549162 C20orf173Q96LM9 149 aa3.52□□□□□ -1.85
SCAF11-212ENST00000549162 TTC28Q96AY4 2481 aa3.52□□□□□ -1.85
SCAF11-212ENST00000549162 COX7A2P2O60397 106 aa3.51□□□□□ -1.85
SCAF11-212ENST00000549162 MLANAQ16655 118 aa3.51□□□□□ -1.85
SCAF11-212ENST00000549162 SPANXN5Q5MJ07 72 aa3.51□□□□□ -1.85
SCAF11-212ENST00000549162 MORN5Q5VZ52 161 aa3.51□□□□□ -1.85
SCAF11-212ENST00000549162 MIC13Q5XKP0 118 aa3.51□□□□□ -1.85
SCAF11-212ENST00000549162 C16orf74Q96GX8 76 aa3.51□□□□□ -1.85
SCAF11-212ENST00000549162 MSRB1Q9NZV6 116 aa3.51□□□□□ -1.85
SCAF11-212ENST00000549162 TRBV6-4A0A1B0GX49 114 aa3.51□□□□□ -1.85
SCAF11-212ENST00000549162 C11orf94C9JXX5 98 aa3.51□□□□□ -1.85
SCAF11-212ENST00000549162 TSPAN13O95857 204 aa3.51□□□□□ -1.85
SCAF11-212ENST00000549162 S100A12P80511 92 aa3.51□□□□□ -1.85
SCAF11-212ENST00000549162 FAM122CQ6P4D5 195 aa3.51□□□□□ -1.85
SCAF11-212ENST00000549162 FA2HQ7L5A8 372 aa3.51□□□□□ -1.85
SCAF11-212ENST00000549162 LINC00518Q8N0U6 118 aa3.51□□□□□ -1.85
SCAF11-212ENST00000549162 NRACQ8N912 160 aa3.51□□□□□ -1.85
SCAF11-212ENST00000549162 ZNRF2Q8NHG8 242 aa3.51□□□□□ -1.85
SCAF11-212ENST00000549162 LAMA3Q16787 3333 aa3.51□□□□□ -1.85
SCAF11-212ENST00000549162 SMG1Q96Q15 3661 aaKnown RBP3.51□□□□□ -1.85
SCAF11-212ENST00000549162 TENM4Q6N022 2769 aa3.51□□□□□ -1.85
SCAF11-212ENST00000549162 PPP5D1E7EU14 171 aa3.51□□□□□ -1.85
SCAF11-212ENST00000549162 IFNA17P01571 189 aa3.51□□□□□ -1.85
SCAF11-212ENST00000549162 SFTA2Q6UW10 78 aa3.51□□□□□ -1.85
SCAF11-212ENST00000549162 RFESDQ8TAC1 157 aa3.51□□□□□ -1.85
SCAF11-212ENST00000549162 WWC2-AS2Q96NR7 200 aa3.51□□□□□ -1.85
SCAF11-212ENST00000549162 ZNF471Q9BX82 626 aaPredicted RBP3.51□□□□□ -1.85
SCAF11-212ENST00000549162 PSG8Q9UQ74 426 aa3.51□□□□□ -1.85
SCAF11-212ENST00000549162 MUC3AQ02505 3323 aa3.51□□□□□ -1.85
SCAF11-212ENST00000549162 WDFY4Q6ZS81 3184 aa3.51□□□□□ -1.85
SCAF11-212ENST00000549162 TRAV21A0A0B4J279 112 aa3.51□□□□□ -1.85
SCAF11-212ENST00000549162 A0A0J9YXY3 114 aa3.51□□□□□ -1.85
SCAF11-212ENST00000549162 IFITM10A6NMD0 228 aa3.51□□□□□ -1.85
SCAF11-212ENST00000549162 TNFSF12O43508 249 aa3.51□□□□□ -1.85
SCAF11-212ENST00000549162 IFNA10P01566 189 aa3.51□□□□□ -1.85
SCAF11-212ENST00000549162 POLR2KP53803 58 aaKnown RBP3.51□□□□□ -1.85
SCAF11-212ENST00000549162 PHLDA1Q8WV24 401 aaPredicted RBP3.51□□□□□ -1.85
SCAF11-212ENST00000549162 MS4A6AQ9H2W1 248 aa3.51□□□□□ -1.85
SCAF11-212ENST00000549162 TNFRSF18Q9Y5U5 241 aa3.51□□□□□ -1.85
SCAF11-212ENST00000549162 VCANP13611 3396 aa3.5□□□□□ -1.85
SCAF11-212ENST00000549162 TRIOO75962 3097 aa3.5□□□□□ -1.85
SCAF11-212ENST00000549162 A0A1B0GUV1 79 aa3.5□□□□□ -1.85
SCAF11-212ENST00000549162 LINC01548A6NM66 108 aa3.5□□□□□ -1.85
SCAF11-212ENST00000549162 M0QXV9 152 aa3.5□□□□□ -1.85
SCAF11-212ENST00000549162 DMRTC1Q5HYR2 192 aa3.5□□□□□ -1.85
SCAF11-212ENST00000549162 TMEM263Q8WUH6 116 aaKnown RBP3.5□□□□□ -1.85
SCAF11-212ENST00000549162 LINC00052Q96N35 136 aa3.5□□□□□ -1.85
SCAF11-212ENST00000549162 RBMY1BA6NDE4 496 aaKnown RBP3.5□□□□□ -1.85
SCAF11-212ENST00000549162 RBMY1EA6NEQ0 496 aaKnown RBP3.5□□□□□ -1.85
SCAF11-212ENST00000549162 RBMY1DP0C7P1 496 aaKnown RBP3.5□□□□□ -1.85
SCAF11-212ENST00000549162 RNASE3P12724 160 aaKnown RBP3.5□□□□□ -1.85
SCAF11-212ENST00000549162 ODF3L2Q3SX64 289 aa3.5□□□□□ -1.85
SCAF11-212ENST00000549162 DMXL2Q8TDJ6 3036 aa3.5□□□□□ -1.85
SCAF11-212ENST00000549162 GNG7O60262 68 aa3.5□□□□□ -1.85
SCAF11-212ENST00000549162 TRGV3P03979 118 aa3.5□□□□□ -1.85
SCAF11-212ENST00000549162 RPL35P42766 123 aaKnown RBP3.5□□□□□ -1.85
SCAF11-212ENST00000549162 MAPKAPK5-AS1Q8N8E1 139 aa3.5□□□□□ -1.85
SCAF11-212ENST00000549162 LEAP2Q969E1 77 aa3.5□□□□□ -1.85
SCAF11-212ENST00000549162 A8MWL6 223 aa3.49□□□□□ -1.85
SCAF11-212ENST00000549162 H7BYZ3 331 aa3.49□□□□□ -1.85
SCAF11-212ENST00000549162 PAFAH1B2P68402 229 aa3.49□□□□□ -1.85
SCAF11-212ENST00000549162 NFE4Q86UQ8 179 aa3.49□□□□□ -1.85
SCAF11-212ENST00000549162 PRIMA1Q86XR5 153 aa3.49□□□□□ -1.85
SCAF11-212ENST00000549162 FAM104AQ969W3 186 aa3.49□□□□□ -1.85
SCAF11-212ENST00000549162 TIMM17AQ99595 171 aa3.49□□□□□ -1.85
SCAF11-212ENST00000549162 TRAV39A0A0B4J263 110 aa3.49□□□□□ -1.85
SCAF11-212ENST00000549162 FABP5P3A8MUU1 101 aa3.49□□□□□ -1.85
SCAF11-212ENST00000549162 ZNF25P17030 456 aaPredicted RBP3.49□□□□□ -1.85
SCAF11-212ENST00000549162 AMELXQ99217 191 aa3.49□□□□□ -1.85
SCAF11-212ENST00000549162 GVQW2A0A096LPI5 108 aaPredicted RBP3.49□□□□□ -1.85
SCAF11-212ENST00000549162 IGHV3-53P01767 116 aa3.49□□□□□ -1.85
SCAF11-212ENST00000549162 IAPPP10997 89 aa3.49□□□□□ -1.85
SCAF11-212ENST00000549162 RPL13AP40429 203 aaKnown RBP3.49□□□□□ -1.85
SCAF11-212ENST00000549162 LINC00310P59036 64 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms