RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 H2BFSP57053 126 aa4.65□□□□□ -1.67
SCAF11-211ENST00000547950 C9orf47Q6ZRZ4 202 aa4.65□□□□□ -1.67
SCAF11-211ENST00000547950 C11orf72Q8NBR9 251 aa4.65□□□□□ -1.67
SCAF11-211ENST00000547950 ZNF680Q8NEM1 530 aa4.65□□□□□ -1.67
SCAF11-211ENST00000547950 SCGB1C1Q8TD33 95 aa4.65□□□□□ -1.67
SCAF11-211ENST00000547950 PPP1R1CQ8WVI7 109 aa4.65□□□□□ -1.67
SCAF11-211ENST00000547950 FXYD5Q96DB9 178 aa4.65□□□□□ -1.67
SCAF11-211ENST00000547950 FAM19A4Q96LR4 140 aa4.65□□□□□ -1.67
SCAF11-211ENST00000547950 SMIM3Q9BZL3 60 aa4.65□□□□□ -1.67
SCAF11-211ENST00000547950 TP53TG3Q9ULZ0 132 aa4.65□□□□□ -1.67
SCAF11-211ENST00000547950 FUT9Q9Y231 359 aa4.65□□□□□ -1.67
SCAF11-211ENST00000547950 IGHV1OR15-1A0A075B7D0 117 aa4.64□□□□□ -1.67
SCAF11-211ENST00000547950 C16orf90A8MZG2 172 aa4.64□□□□□ -1.67
SCAF11-211ENST00000547950 EIF3GO75821 320 aaKnown RBP eCLIP4.64□□□□□ -1.67
SCAF11-211ENST00000547950 IFNA5P01569 189 aa4.64□□□□□ -1.67
SCAF11-211ENST00000547950 IGHV3-53P01767 116 aa4.64□□□□□ -1.67
SCAF11-211ENST00000547950 CRISP2P16562 243 aa4.64□□□□□ -1.67
SCAF11-211ENST00000547950 ZNF138P52744 262 aa4.64□□□□□ -1.67
SCAF11-211ENST00000547950 ANXA2RQ3ZCQ2 193 aa4.64□□□□□ -1.67
SCAF11-211ENST00000547950 FFAR4Q5NUL3 377 aa4.64□□□□□ -1.67
SCAF11-211ENST00000547950 PRR9Q5T870 116 aa4.64□□□□□ -1.67
SCAF11-211ENST00000547950 ZFAND2AQ8N6M9 145 aa4.64□□□□□ -1.67
SCAF11-211ENST00000547950 Q8TAT8 98 aa4.64□□□□□ -1.67
SCAF11-211ENST00000547950 ZNF503Q96F45 646 aa4.64□□□□□ -1.67
SCAF11-211ENST00000547950 PHYHIPLQ96FC7 376 aa4.64□□□□□ -1.67
SCAF11-211ENST00000547950 VSIG2Q96IQ7 327 aa4.64□□□□□ -1.67
SCAF11-211ENST00000547950 HYLS1Q96M11 299 aa4.64□□□□□ -1.67
SCAF11-211ENST00000547950 ATP5SQ99766 215 aa4.64□□□□□ -1.67
SCAF11-211ENST00000547950 LINC00467Q9BRT7 94 aa4.64□□□□□ -1.67
SCAF11-211ENST00000547950 MRPL32Q9BYC8 188 aaKnown RBP4.64□□□□□ -1.67
SCAF11-211ENST00000547950 KCNIP2Q9NS61 270 aa4.64□□□□□ -1.67
SCAF11-211ENST00000547950 AP5S1Q9NUS5 200 aa4.64□□□□□ -1.67
SCAF11-211ENST00000547950 ZNF492Q9P255 531 aa4.64□□□□□ -1.67
SCAF11-211ENST00000547950 HERC2O95714 4834 aa4.64□□□□□ -1.67
SCAF11-211ENST00000547950 KIAA1109Q2LD37 5005 aa4.64□□□□□ -1.67
SCAF11-211ENST00000547950 DNAH17Q9UFH2 4485 aa4.63□□□□□ -1.67
SCAF11-211ENST00000547950 FAT2Q9NYQ8 4349 aa4.63□□□□□ -1.67
SCAF11-211ENST00000547950 A0A096LPF7 62 aa4.63□□□□□ -1.67
SCAF11-211ENST00000547950 H3BNG1 76 aa4.63□□□□□ -1.67
SCAF11-211ENST00000547950 SPINK4O60575 86 aa4.63□□□□□ -1.67
SCAF11-211ENST00000547950 MPC2O95563 127 aa4.63□□□□□ -1.67
SCAF11-211ENST00000547950 NMBP08949 121 aa4.63□□□□□ -1.67
SCAF11-211ENST00000547950 RPL12P30050 165 aaKnown RBP4.63□□□□□ -1.67
SCAF11-211ENST00000547950 TCL1AP56279 114 aa4.63□□□□□ -1.67
SCAF11-211ENST00000547950 DEFA1P59665 94 aa4.63□□□□□ -1.67
SCAF11-211ENST00000547950 DEFA3P59666 94 aa4.63□□□□□ -1.67
SCAF11-211ENST00000547950 UBE2L3P68036 154 aaKnown RBP4.63□□□□□ -1.67
SCAF11-211ENST00000547950 MUC21Q5SSG8 566 aa4.63□□□□□ -1.67
SCAF11-211ENST00000547950 ARPC5LQ9BPX5 153 aa4.63□□□□□ -1.67
SCAF11-211ENST00000547950 MARVELD1Q9BSK0 173 aa4.63□□□□□ -1.67
SCAF11-211ENST00000547950 Q9H3A6 140 aa4.63□□□□□ -1.67
SCAF11-211ENST00000547950 MRPL16Q9NX20 251 aaKnown RBP4.63□□□□□ -1.67
SCAF11-211ENST00000547950 PTTG2Q9NZH5 202 aa4.63□□□□□ -1.67
SCAF11-211ENST00000547950 MBD2Q9UBB5 411 aa4.63□□□□□ -1.67
SCAF11-211ENST00000547950 HSPB11Q9Y547 144 aa4.63□□□□□ -1.67
SCAF11-211ENST00000547950 A0A1W2PPV4 95 aa4.62□□□□□ -1.67
SCAF11-211ENST00000547950 PGPA6NDG6 321 aa4.62□□□□□ -1.67
SCAF11-211ENST00000547950 HMGB3O15347 200 aaKnown RBP4.62□□□□□ -1.67
SCAF11-211ENST00000547950 PET100P0DJ07 73 aa4.62□□□□□ -1.67
SCAF11-211ENST00000547950 TAS2R45P59539 299 aa4.62□□□□□ -1.67
SCAF11-211ENST00000547950 TTC32Q5I0X7 151 aa4.62□□□□□ -1.67
SCAF11-211ENST00000547950 IBA57Q5T440 356 aaKnown RBP4.62□□□□□ -1.67
SCAF11-211ENST00000547950 SPATA12Q7Z6I5 190 aa4.62□□□□□ -1.67
SCAF11-211ENST00000547950 LYPD1Q8N2G4 141 aa4.62□□□□□ -1.67
SCAF11-211ENST00000547950 ST6GAL2Q96JF0 529 aa4.62□□□□□ -1.67
SCAF11-211ENST00000547950 C18orf15Q96N68 181 aa4.62□□□□□ -1.67
SCAF11-211ENST00000547950 C8orf49Q96NF6 230 aa4.62□□□□□ -1.67
SCAF11-211ENST00000547950 UPK3BQ9BT76 320 aa4.62□□□□□ -1.67
SCAF11-211ENST00000547950 KRTAP1-5Q9BYS1 174 aa4.62□□□□□ -1.67
SCAF11-211ENST00000547950 WFDC1Q9HC57 220 aa4.62□□□□□ -1.67
SCAF11-211ENST00000547950 MDFICQ9P1T7 246 aa4.62□□□□□ -1.67
SCAF11-211ENST00000547950 RPH3ALQ9UNE2 315 aa4.62□□□□□ -1.67
SCAF11-211ENST00000547950 HHLA3Q9XRX5 114 aa4.62□□□□□ -1.67
SCAF11-211ENST00000547950 MRPS16Q9Y3D3 137 aaKnown RBP4.62□□□□□ -1.67
SCAF11-211ENST00000547950 DNAH6Q9C0G6 4158 aa4.62□□□□□ -1.67
SCAF11-211ENST00000547950 PKD1P98161 4303 aa4.61□□□□□ -1.67
SCAF11-211ENST00000547950 TRGV4A0A0C4DH28 118 aa4.61□□□□□ -1.67
SCAF11-211ENST00000547950 RBAKDNA6NC62 111 aa4.61□□□□□ -1.67
SCAF11-211ENST00000547950 DIRC3C9JPN6 131 aa4.61□□□□□ -1.67
SCAF11-211ENST00000547950 ZNF415Q09FC8 603 aa4.61□□□□□ -1.67
SCAF11-211ENST00000547950 FHL2Q14192 279 aa4.61□□□□□ -1.67
SCAF11-211ENST00000547950 ZNF266Q14584 549 aa4.61□□□□□ -1.67
SCAF11-211ENST00000547950 TMEM183BQ1AE95 376 aa4.61□□□□□ -1.67
SCAF11-211ENST00000547950 ACOT6Q3I5F7 207 aaPredicted RBP4.61□□□□□ -1.67
SCAF11-211ENST00000547950 KHDC3LQ587J8 217 aa4.61□□□□□ -1.67
SCAF11-211ENST00000547950 FAM159AQ6UWV7 190 aa4.61□□□□□ -1.67
SCAF11-211ENST00000547950 TMEM183AQ8IXX5 376 aa4.61□□□□□ -1.67
SCAF11-211ENST00000547950 CMTM2Q8TAZ6 248 aa4.61□□□□□ -1.67
SCAF11-211ENST00000547950 OTORQ9NRC9 128 aa4.61□□□□□ -1.67
SCAF11-211ENST00000547950 PRO0255Q9UI72 69 aa4.61□□□□□ -1.67
SCAF11-211ENST00000547950 NAGKQ9UJ70 344 aa4.61□□□□□ -1.67
SCAF11-211ENST00000547950 ICOSQ9Y6W8 199 aa4.61□□□□□ -1.67
SCAF11-211ENST00000547950 TRBV7-9A0A0J9YWB2 115 aa4.6□□□□□ -1.67
SCAF11-211ENST00000547950 A0A1W2PPQ1 181 aa4.6□□□□□ -1.67
SCAF11-211ENST00000547950 SIVA1O15304 175 aa4.6□□□□□ -1.67
SCAF11-211ENST00000547950 GNRH2O43555 120 aa4.6□□□□□ -1.67
SCAF11-211ENST00000547950 NXPH4O95158 308 aa4.6□□□□□ -1.67
SCAF11-211ENST00000547950 SFTA3P0C7M3 94 aa4.6□□□□□ -1.67
SCAF11-211ENST00000547950 CRYBA4P53673 196 aa4.6□□□□□ -1.67
SCAF11-211ENST00000547950 RAB2AP61019 212 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms