RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 NBASA2RRP1 2371 aa10.23□□□□□ -0.77
PTCH1-212ENST00000546744 IGHV3OR16-8A0A075B7F1 116 aa10.23□□□□□ -0.77
PTCH1-212ENST00000546744 C15orf65H3BRN8 121 aa10.23□□□□□ -0.77
PTCH1-212ENST00000546744 MALP21145 153 aa10.23□□□□□ -0.77
PTCH1-212ENST00000546744 ERCC8Q13216 396 aa10.23□□□□□ -0.77
PTCH1-212ENST00000546744 ZC2HC1AQ96GY0 325 aa10.23□□□□□ -0.77
PTCH1-212ENST00000546744 SPXQ9BT56 116 aa10.23□□□□□ -0.77
PTCH1-212ENST00000546744 Q71RC1 249 aaPredicted RBP10.23□□□□□ -0.77
PTCH1-212ENST00000546744 SH2D6Q7Z4S9 175 aa10.23□□□□□ -0.77
PTCH1-212ENST00000546744 IGF2BP2-AS1Q96M15 143 aa10.22□□□□□ -0.77
PTCH1-212ENST00000546744 SPRR3Q9UBC9 169 aa10.22□□□□□ -0.77
PTCH1-212ENST00000546744 SYNJ2BPP57105 145 aa10.22□□□□□ -0.77
PTCH1-212ENST00000546744 PIFOQ8TCI5 191 aa10.22□□□□□ -0.77
PTCH1-212ENST00000546744 ACACAQ13085 2346 aa10.22□□□□□ -0.77
PTCH1-212ENST00000546744 HEATR1Q9H583 2144 aaKnown RBP10.22□□□□□ -0.77
PTCH1-212ENST00000546744 PINLYPA6NC86 204 aa10.21□□□□□ -0.77
PTCH1-212ENST00000546744 SDHAF1A6NFY7 115 aa10.21□□□□□ -0.77
PTCH1-212ENST00000546744 LY6EQ16553 131 aa10.21□□□□□ -0.77
PTCH1-212ENST00000546744 C5orf42Q9H799 3197 aa10.21□□□□□ -0.78
PTCH1-212ENST00000546744 ATG2AQ2TAZ0 1938 aa10.21□□□□□ -0.78
PTCH1-212ENST00000546744 PRSS29PA6NIE9 313 aa10.21□□□□□ -0.78
PTCH1-212ENST00000546744 NDUFC2O95298 119 aa10.21□□□□□ -0.78
PTCH1-212ENST00000546744 WFDC2Q14508 124 aa10.21□□□□□ -0.78
PTCH1-212ENST00000546744 RBMY1FQ15415 496 aaKnown RBP10.21□□□□□ -0.78
PTCH1-212ENST00000546744 C2orf70A6NJV1 201 aa10.21□□□□□ -0.78
PTCH1-212ENST00000546744 INS-IGF2F8WCM5 200 aa10.21□□□□□ -0.78
PTCH1-212ENST00000546744 TFF1P04155 84 aa10.21□□□□□ -0.78
PTCH1-212ENST00000546744 FAM110DQ8TAY7 271 aaPredicted RBP10.21□□□□□ -0.78
PTCH1-212ENST00000546744 IGKV3D-20A0A0C4DH25 116 aa10.2□□□□□ -0.78
PTCH1-212ENST00000546744 IGHG3P01860 377 aa10.2□□□□□ -0.78
PTCH1-212ENST00000546744 WT1-ASQ06250 92 aa10.2□□□□□ -0.78
PTCH1-212ENST00000546744 ITLN2Q8WWU7 325 aaPredicted RBP10.2□□□□□ -0.78
PTCH1-212ENST00000546744 TRANK1O15050 2925 aa10.2□□□□□ -0.78
PTCH1-212ENST00000546744 DIDO1Q9BTC0 2240 aaKnown RBP10.2□□□□□ -0.78
PTCH1-212ENST00000546744 FAM168AQ92567 244 aa10.19□□□□□ -0.78
PTCH1-212ENST00000546744 A0A0U1RRA0 63 aa10.19□□□□□ -0.78
PTCH1-212ENST00000546744 SPAARA0A1B0GVQ0 90 aa10.19□□□□□ -0.78
PTCH1-212ENST00000546744 MBD3L4A6NDZ8 208 aaPredicted RBP10.19□□□□□ -0.78
PTCH1-212ENST00000546744 MBD3L3A6NE82 208 aaPredicted RBP10.19□□□□□ -0.78
PTCH1-212ENST00000546744 MBD3L5A6NJ08 208 aaPredicted RBP10.19□□□□□ -0.78
PTCH1-212ENST00000546744 LINC01620Q4KN68 170 aa10.19□□□□□ -0.78
PTCH1-212ENST00000546744 MORN5Q5VZ52 161 aa10.19□□□□□ -0.78
PTCH1-212ENST00000546744 MBD3L2Q8NHZ7 208 aaPredicted RBP10.19□□□□□ -0.78
PTCH1-212ENST00000546744 CITED2Q99967 270 aaPredicted RBP10.19□□□□□ -0.78
PTCH1-212ENST00000546744 CD59P13987 128 aa10.19□□□□□ -0.78
PTCH1-212ENST00000546744 FAM120AOSQ5T036 256 aa10.19□□□□□ -0.78
PTCH1-212ENST00000546744 VMO1Q7Z5L0 202 aa10.19□□□□□ -0.78
PTCH1-212ENST00000546744 CHCHD5Q9BSY4 110 aa10.19□□□□□ -0.78
PTCH1-212ENST00000546744 A0A0B4J2C4 111 aa10.19□□□□□ -0.78
PTCH1-212ENST00000546744 CTRLP40313 264 aa10.19□□□□□ -0.78
PTCH1-212ENST00000546744 FXYD2P54710 66 aa10.19□□□□□ -0.78
PTCH1-212ENST00000546744 LINC00205P59089 165 aa10.19□□□□□ -0.78
PTCH1-212ENST00000546744 C6orf226Q5I0X4 101 aa10.19□□□□□ -0.78
PTCH1-212ENST00000546744 STHQ8IWL8 128 aa10.19□□□□□ -0.78
PTCH1-212ENST00000546744 MDS2Q8NDY4 140 aa10.19□□□□□ -0.78
PTCH1-212ENST00000546744 C8orf49Q96NF6 230 aa10.19□□□□□ -0.78
PTCH1-212ENST00000546744 PRSS22Q9GZN4 317 aa10.19□□□□□ -0.78
PTCH1-212ENST00000546744 TECTAO75443 2155 aa10.19□□□□□ -0.78
PTCH1-212ENST00000546744 PLXND1Q9Y4D7 1925 aa10.18□□□□□ -0.78
PTCH1-212ENST00000546744 LCNL1Q6ZST4 164 aa10.18□□□□□ -0.78
PTCH1-212ENST00000546744 TRGV4A0A0C4DH28 118 aa10.18□□□□□ -0.78
PTCH1-212ENST00000546744 H3BQ85 93 aa10.18□□□□□ -0.78
PTCH1-212ENST00000546744 HERVK_113P63121 156 aa10.18□□□□□ -0.78
PTCH1-212ENST00000546744 E9PLD3 99 aa10.17□□□□□ -0.78
PTCH1-212ENST00000546744 C17orf58Q2M2W7 97 aa10.17□□□□□ -0.78
PTCH1-212ENST00000546744 IGFBPL1Q8WX77 278 aa10.17□□□□□ -0.78
PTCH1-212ENST00000546744 DAZ1Q9NQZ3 744 aaKnown RBP10.17□□□□□ -0.78
PTCH1-212ENST00000546744 H0YGX0 51 aa10.17□□□□□ -0.78
PTCH1-212ENST00000546744 TNRC6AQ8NDV7 1962 aaKnown RBP10.17□□□□□ -0.78
PTCH1-212ENST00000546744 TRBV10-2A0A0K0K1G8 114 aa10.17□□□□□ -0.78
PTCH1-212ENST00000546744 IGHV3-11P01762 117 aa10.17□□□□□ -0.78
PTCH1-212ENST00000546744 HERV-K104P63124 156 aa10.17□□□□□ -0.78
PTCH1-212ENST00000546744 PRR31Q5SQ13 230 aa10.17□□□□□ -0.78
PTCH1-212ENST00000546744 RNF138Q8WVD3 245 aa10.17□□□□□ -0.78
PTCH1-212ENST00000546744 CREBBPQ92793 2442 aa10.17□□□□□ -0.78
PTCH1-212ENST00000546744 TEX36Q5VZQ5 186 aa10.16□□□□□ -0.78
PTCH1-212ENST00000546744 THBDP07204 575 aa10.16□□□□□ -0.78
PTCH1-212ENST00000546744 CR1LQ2VPA4 569 aa10.16□□□□□ -0.78
PTCH1-212ENST00000546744 NPC2P61916 151 aa10.16□□□□□ -0.78
PTCH1-212ENST00000546744 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.15□□□□□ -0.78
PTCH1-212ENST00000546744 C1orf159Q96HA4 380 aa10.15□□□□□ -0.78
PTCH1-212ENST00000546744 EFNA4P52798 201 aa10.15□□□□□ -0.78
PTCH1-212ENST00000546744 ATP5J2P56134 94 aa10.15□□□□□ -0.78
PTCH1-212ENST00000546744 KRTAP27-1Q3LI81 207 aa10.15□□□□□ -0.78
PTCH1-212ENST00000546744 ZNF672Q499Z4 452 aaPredicted RBP10.15□□□□□ -0.78
PTCH1-212ENST00000546744 A0A1B0GXF2 115 aa10.15□□□□□ -0.78
PTCH1-212ENST00000546744 CD24P25063 80 aa10.15□□□□□ -0.78
PTCH1-212ENST00000546744 Q6ZUT4 128 aa10.14□□□□□ -0.79
PTCH1-212ENST00000546744 GTSF1Q8WW33 167 aa10.14□□□□□ -0.79
PTCH1-212ENST00000546744 TM2D2Q9BX73 214 aa10.14□□□□□ -0.79
PTCH1-212ENST00000546744 INSP01308 110 aa10.14□□□□□ -0.79
PTCH1-212ENST00000546744 GP9P14770 177 aa10.14□□□□□ -0.79
PTCH1-212ENST00000546744 LINC00643Q86TS7 51 aa10.14□□□□□ -0.79
PTCH1-212ENST00000546744 ZNF491Q8N8L2 437 aa10.14□□□□□ -0.79
PTCH1-212ENST00000546744 POLEQ07864 2286 aa10.14□□□□□ -0.79
PTCH1-212ENST00000546744 ATP1A1-AS1Q5TC04 95 aa10.14□□□□□ -0.79
PTCH1-212ENST00000546744 WDR86Q86TI4 376 aa10.14□□□□□ -0.79
PTCH1-212ENST00000546744 RHPN1-AS1Q9BWJ2 59 aa10.14□□□□□ -0.79
PTCH1-212ENST00000546744 SS18Q15532 418 aa10.13□□□□□ -0.79
PTCH1-212ENST00000546744 RBM3P98179 157 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms