RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 LINC00052Q96N35 136 aa4.13□□□□□ -1.75
CPSF7-222ENST00000544585 TMEM208Q9BTX3 173 aa4.13□□□□□ -1.75
CPSF7-222ENST00000544585 PDCD10Q9BUL8 212 aa4.13□□□□□ -1.75
CPSF7-222ENST00000544585 ENY2Q9NPA8 101 aa4.13□□□□□ -1.75
CPSF7-222ENST00000544585 COMMD3Q9UBI1 195 aa4.13□□□□□ -1.75
CPSF7-222ENST00000544585 DNAH5Q8TE73 4624 aa4.12□□□□□ -1.75
CPSF7-222ENST00000544585 LYRM1O43325 122 aa4.12□□□□□ -1.75
CPSF7-222ENST00000544585 RD3LP0DJH9 198 aa4.12□□□□□ -1.75
CPSF7-222ENST00000544585 DEFB130BP0DP73 79 aa4.12□□□□□ -1.75
CPSF7-222ENST00000544585 DEFB130AP0DP74 79 aa4.12□□□□□ -1.75
CPSF7-222ENST00000544585 RNASE2P10153 161 aaKnown RBP4.12□□□□□ -1.75
CPSF7-222ENST00000544585 M6PRP20645 277 aa4.12□□□□□ -1.75
CPSF7-222ENST00000544585 TSPOP30536 169 aa4.12□□□□□ -1.75
CPSF7-222ENST00000544585 MEOX2P50222 304 aa4.12□□□□□ -1.75
CPSF7-222ENST00000544585 NKX2-5P52952 324 aaPredicted RBP4.12□□□□□ -1.75
CPSF7-222ENST00000544585 TAS2R19P59542 299 aa4.12□□□□□ -1.75
CPSF7-222ENST00000544585 GDF5OSQ5U4N7 250 aa4.12□□□□□ -1.75
CPSF7-222ENST00000544585 SAMD13Q5VXD3 122 aa4.12□□□□□ -1.75
CPSF7-222ENST00000544585 SLC35G3Q8N808 338 aa4.12□□□□□ -1.75
CPSF7-222ENST00000544585 ZNF709Q8N972 641 aa4.12□□□□□ -1.75
CPSF7-222ENST00000544585 NKAPP1Q8N9T2 125 aa4.12□□□□□ -1.75
CPSF7-222ENST00000544585 HSD17B11Q8NBQ5 300 aa4.12□□□□□ -1.75
CPSF7-222ENST00000544585 ZFAND1Q8TCF1 268 aa4.12□□□□□ -1.75
CPSF7-222ENST00000544585 IGF2BP2-AS1Q96M15 143 aa4.12□□□□□ -1.75
CPSF7-222ENST00000544585 MARVELD1Q9BSK0 173 aa4.12□□□□□ -1.75
CPSF7-222ENST00000544585 UPK3BQ9BT76 320 aa4.12□□□□□ -1.75
CPSF7-222ENST00000544585 SLC35B3Q9H1N7 401 aa4.12□□□□□ -1.75
CPSF7-222ENST00000544585 SLC25A22Q9H936 323 aa4.12□□□□□ -1.75
CPSF7-222ENST00000544585 IFT46Q9NQC8 304 aa4.12□□□□□ -1.75
CPSF7-222ENST00000544585 APOBP04114 4563 aaKnown RBP4.12□□□□□ -1.75
CPSF7-222ENST00000544585 INMT-MINDY4F8WBC2 141 aa4.11□□□□□ -1.75
CPSF7-222ENST00000544585 ISLRO14498 428 aa4.11□□□□□ -1.75
CPSF7-222ENST00000544585 SIVA1O15304 175 aa4.11□□□□□ -1.75
CPSF7-222ENST00000544585 HSBP1O75506 76 aa4.11□□□□□ -1.75
CPSF7-222ENST00000544585 IGKV1-39P01597 117 aa4.11□□□□□ -1.75
CPSF7-222ENST00000544585 PMP2P02689 132 aa4.11□□□□□ -1.75
CPSF7-222ENST00000544585 C1QBP02746 253 aa4.11□□□□□ -1.75
CPSF7-222ENST00000544585 IGKV1D-39P04432 117 aa4.11□□□□□ -1.75
CPSF7-222ENST00000544585 IL4P05112 153 aa4.11□□□□□ -1.75
CPSF7-222ENST00000544585 IGLC1P0CG04 106 aa4.11□□□□□ -1.75
CPSF7-222ENST00000544585 OR10J1P30954 320 aa4.11□□□□□ -1.75
CPSF7-222ENST00000544585 HTR2BP41595 481 aa4.11□□□□□ -1.75
CPSF7-222ENST00000544585 PSMB3P49720 205 aa4.11□□□□□ -1.75
CPSF7-222ENST00000544585 TAS2R46P59540 309 aa4.11□□□□□ -1.75
CPSF7-222ENST00000544585 TAS2R20P59543 309 aa4.11□□□□□ -1.75
CPSF7-222ENST00000544585 RRAS2P62070 204 aaPredicted RBP4.11□□□□□ -1.75
CPSF7-222ENST00000544585 TSPAN5P62079 268 aa4.11□□□□□ -1.75
CPSF7-222ENST00000544585 FCN2Q15485 313 aa4.11□□□□□ -1.75
CPSF7-222ENST00000544585 C1orf194Q5T5A4 169 aa4.11□□□□□ -1.75
CPSF7-222ENST00000544585 IDNKQ5T6J7 187 aa4.11□□□□□ -1.75
CPSF7-222ENST00000544585 FAM78BQ5VT40 261 aa4.11□□□□□ -1.75
CPSF7-222ENST00000544585 SFXN4Q6P4A7 337 aa4.11□□□□□ -1.75
CPSF7-222ENST00000544585 OR5H2Q8NGV7 314 aa4.11□□□□□ -1.75
CPSF7-222ENST00000544585 COQ8AQ8NI60 647 aa4.11□□□□□ -1.75
CPSF7-222ENST00000544585 RNASEH2CQ8TDP1 164 aaKnown RBP4.11□□□□□ -1.75
CPSF7-222ENST00000544585 S100A16Q96FQ6 103 aaKnown RBP4.11□□□□□ -1.75
CPSF7-222ENST00000544585 RPRMQ9NS64 109 aa4.11□□□□□ -1.75
CPSF7-222ENST00000544585 MRPL36Q9P0J6 103 aaKnown RBP4.11□□□□□ -1.75
CPSF7-222ENST00000544585 COPZ2Q9P299 210 aa4.11□□□□□ -1.75
CPSF7-222ENST00000544585 ALG5Q9Y673 324 aa4.11□□□□□ -1.75
CPSF7-222ENST00000544585 FLG2Q5D862 2391 aaPredicted RBP4.11□□□□□ -1.75
CPSF7-222ENST00000544585 A0A0J9YX75 114 aa4.1□□□□□ -1.75
CPSF7-222ENST00000544585 C7orf66A4D0T2 115 aa4.1□□□□□ -1.75
CPSF7-222ENST00000544585 F6UB75 175 aa4.1□□□□□ -1.75
CPSF7-222ENST00000544585 H3BNG1 76 aa4.1□□□□□ -1.75
CPSF7-222ENST00000544585 ADAP1O75689 374 aa4.1□□□□□ -1.75
CPSF7-222ENST00000544585 SMR3BP02814 79 aaPredicted RBP4.1□□□□□ -1.75
CPSF7-222ENST00000544585 ELK1P19419 428 aa4.1□□□□□ -1.75
CPSF7-222ENST00000544585 RCVRNP35243 200 aa4.1□□□□□ -1.75
CPSF7-222ENST00000544585 UBE2MP61081 183 aaKnown RBP4.1□□□□□ -1.75
CPSF7-222ENST00000544585 ESRGQ1W209 222 aa4.1□□□□□ -1.75
CPSF7-222ENST00000544585 BSXQ3C1V8 233 aa4.1□□□□□ -1.75
CPSF7-222ENST00000544585 C2orf83Q53S99 150 aa4.1□□□□□ -1.75
CPSF7-222ENST00000544585 SPINK9Q5DT21 86 aa4.1□□□□□ -1.75
CPSF7-222ENST00000544585 PRSS54Q6PEW0 395 aa4.1□□□□□ -1.75
CPSF7-222ENST00000544585 OR51G1Q8NGK1 321 aa4.1□□□□□ -1.75
CPSF7-222ENST00000544585 OR4C16Q8NGL9 310 aa4.1□□□□□ -1.75
CPSF7-222ENST00000544585 TYMSOSQ8TAI1 123 aa4.1□□□□□ -1.75
CPSF7-222ENST00000544585 RXFP4Q8TDU9 374 aa4.1□□□□□ -1.75
CPSF7-222ENST00000544585 MRGPRFQ96AM1 343 aa4.1□□□□□ -1.75
CPSF7-222ENST00000544585 GNPNAT1Q96EK6 184 aaPredicted RBP4.1□□□□□ -1.75
CPSF7-222ENST00000544585 HYLS1Q96M11 299 aa4.1□□□□□ -1.75
CPSF7-222ENST00000544585 GFRA4Q9GZZ7 299 aa4.1□□□□□ -1.75
CPSF7-222ENST00000544585 CACFD1Q9UGQ2 172 aa4.1□□□□□ -1.75
CPSF7-222ENST00000544585 FLVCR2Q9UPI3 526 aa4.1□□□□□ -1.75
CPSF7-222ENST00000544585 SRRM2Q9UQ35 2752 aaKnown RBP4.1□□□□□ -1.75
CPSF7-222ENST00000544585 TRAV6A0A075B6T7 132 aa4.09□□□□□ -1.75
CPSF7-222ENST00000544585 A0A0B4J2A0 478 aa4.09□□□□□ -1.75
CPSF7-222ENST00000544585 MEIS3P1A6NDR6 274 aa4.09□□□□□ -1.75
CPSF7-222ENST00000544585 A8MTW9 85 aa4.09□□□□□ -1.75
CPSF7-222ENST00000544585 ZNF705GA8MUZ8 300 aaPredicted RBP4.09□□□□□ -1.75
CPSF7-222ENST00000544585 PMCHP20382 165 aa4.09□□□□□ -1.75
CPSF7-222ENST00000544585 MT3P25713 68 aa4.09□□□□□ -1.75
CPSF7-222ENST00000544585 PRSS3P35030 304 aa4.09□□□□□ -1.75
CPSF7-222ENST00000544585 RND2P52198 227 aa4.09□□□□□ -1.75
CPSF7-222ENST00000544585 AKR1C2P52895 323 aa4.09□□□□□ -1.75
CPSF7-222ENST00000544585 DEFB1P60022 68 aa4.09□□□□□ -1.75
CPSF7-222ENST00000544585 SPCS3P61009 180 aa4.09□□□□□ -1.75
CPSF7-222ENST00000544585 ZNF493Q6ZR52 646 aa4.09□□□□□ -1.75
CPSF7-222ENST00000544585 TMEM256Q8N2U0 113 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms