RNA–Protein interactions for RNA: ENST00000543654.1

NPIPB4-218, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 4

Gene NPIPB4, Length 513 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-218	ENST00000543654	FOXI2	Q6ZQN5	318 aa		4.97	□□□□□ -1.61
NPIPB4-218	ENST00000543654	FAM24B	Q8N5W8	94 aa		4.97	□□□□□ -1.61
NPIPB4-218	ENST00000543654	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	4.97	□□□□□ -1.61
NPIPB4-218	ENST00000543654	OR8A1	Q8NGG7	326 aa		4.97	□□□□□ -1.61
NPIPB4-218	ENST00000543654	TSKU	Q8WUA8	353 aa		4.97	□□□□□ -1.61
NPIPB4-218	ENST00000543654	FAM210B	Q96KR6	192 aa		4.97	□□□□□ -1.61
NPIPB4-218	ENST00000543654	PRR25	Q96S07	402 aa		4.97	□□□□□ -1.61
NPIPB4-218	ENST00000543654	ASCL2	Q99929	193 aa		4.97	□□□□□ -1.61
NPIPB4-218	ENST00000543654	MCRIP2	Q9BUT9	160 aa	Known RBP	4.97	□□□□□ -1.61
NPIPB4-218	ENST00000543654	GFRA4	Q9GZZ7	299 aa		4.97	□□□□□ -1.61
NPIPB4-218	ENST00000543654	NAT8B	Q9UHF3	227 aa		4.97	□□□□□ -1.61
NPIPB4-218	ENST00000543654	URGCP-MRPS24	S4R325	110 aa		4.97	□□□□□ -1.61
NPIPB4-218	ENST00000543654		V9GYV3	84 aa		4.97	□□□□□ -1.61
NPIPB4-218	ENST00000543654	TEP1	Q99973	2627 aa	Known RBP	4.97	□□□□□ -1.61
NPIPB4-218	ENST00000543654	C19orf71	A6NCJ1	209 aa		4.96	□□□□□ -1.62
NPIPB4-218	ENST00000543654	FABP5P3	A8MUU1	101 aa		4.96	□□□□□ -1.62
NPIPB4-218	ENST00000543654	PFN1	P07737	140 aa	Known RBP	4.96	□□□□□ -1.62
NPIPB4-218	ENST00000543654	ZNF688	P0C7X2	276 aa		4.96	□□□□□ -1.62
NPIPB4-218	ENST00000543654	RAB5A	P20339	215 aa		4.96	□□□□□ -1.62
NPIPB4-218	ENST00000543654	HLA-DMB	P28068	263 aa		4.96	□□□□□ -1.62
NPIPB4-218	ENST00000543654	LEP	P41159	167 aa		4.96	□□□□□ -1.62
NPIPB4-218	ENST00000543654	TFPI2	P48307	235 aa		4.96	□□□□□ -1.62
NPIPB4-218	ENST00000543654	SRSF2	Q01130	221 aa	Known RBP	4.96	□□□□□ -1.62
NPIPB4-218	ENST00000543654	DEFB114	Q30KQ6	69 aa		4.96	□□□□□ -1.62
NPIPB4-218	ENST00000543654	RASL11A	Q6T310	242 aa		4.96	□□□□□ -1.62
NPIPB4-218	ENST00000543654	TMEM61	Q8N0U2	210 aa		4.96	□□□□□ -1.62
NPIPB4-218	ENST00000543654	NUDT10	Q8NFP7	164 aa		4.96	□□□□□ -1.62
NPIPB4-218	ENST00000543654		Q8TAT8	98 aa		4.96	□□□□□ -1.62
NPIPB4-218	ENST00000543654	BORCS7	Q96B45	105 aa		4.96	□□□□□ -1.62
NPIPB4-218	ENST00000543654	NUDT11	Q96G61	164 aa		4.96	□□□□□ -1.62
NPIPB4-218	ENST00000543654	ZC2HC1A	Q96GY0	325 aa		4.96	□□□□□ -1.62
NPIPB4-218	ENST00000543654	SGK494	Q96LW2	274 aa		4.96	□□□□□ -1.62
NPIPB4-218	ENST00000543654	VGLL1	Q99990	258 aa		4.96	□□□□□ -1.62
NPIPB4-218	ENST00000543654	RNASE7	Q9H1E1	156 aa	Known RBP	4.96	□□□□□ -1.62
NPIPB4-218	ENST00000543654	ZFHX3	Q15911	3703 aa		4.95	□□□□□ -1.62
NPIPB4-218	ENST00000543654	TRAV21	A0A0B4J279	112 aa		4.95	□□□□□ -1.62
NPIPB4-218	ENST00000543654		A0A0J9YX75	114 aa		4.95	□□□□□ -1.62
NPIPB4-218	ENST00000543654		A0A1B0GW15	77 aa		4.95	□□□□□ -1.62
NPIPB4-218	ENST00000543654	SMIM27	A0A1W2PRY6	76 aa		4.95	□□□□□ -1.62
NPIPB4-218	ENST00000543654	TMEM189	A5PLL7	270 aa		4.95	□□□□□ -1.62
NPIPB4-218	ENST00000543654	COLCA2	A8K830	154 aa		4.95	□□□□□ -1.62
NPIPB4-218	ENST00000543654	C1orf196	B1AJZ1	125 aa		4.95	□□□□□ -1.62
NPIPB4-218	ENST00000543654	MT-ND6	P03923	174 aa		4.95	□□□□□ -1.62
NPIPB4-218	ENST00000543654	TYMS	P04818	313 aa		4.95	□□□□□ -1.62
NPIPB4-218	ENST00000543654	S100A8	P05109	93 aa		4.95	□□□□□ -1.62
NPIPB4-218	ENST00000543654	RAB5B	P61020	215 aa		4.95	□□□□□ -1.62
NPIPB4-218	ENST00000543654	CD300E	Q496F6	205 aa	Predicted RBP	4.95	□□□□□ -1.62
NPIPB4-218	ENST00000543654	WDR73	Q6P4I2	378 aa		4.95	□□□□□ -1.62
NPIPB4-218	ENST00000543654	ATP5L2	Q7Z4Y8	100 aa		4.95	□□□□□ -1.62
NPIPB4-218	ENST00000543654	OR2D3	Q8NGH3	330 aa		4.95	□□□□□ -1.62
NPIPB4-218	ENST00000543654	C20orf173	Q96LM9	149 aa		4.95	□□□□□ -1.62
NPIPB4-218	ENST00000543654	YPEL4	Q96NS1	127 aa		4.95	□□□□□ -1.62
NPIPB4-218	ENST00000543654	CITED1	Q99966	193 aa		4.95	□□□□□ -1.62
NPIPB4-218	ENST00000543654	FAM110A	Q9BQ89	295 aa		4.95	□□□□□ -1.62
NPIPB4-218	ENST00000543654	PYGO2	Q9BRQ0	406 aa		4.95	□□□□□ -1.62
NPIPB4-218	ENST00000543654	KRTAP4-2	Q9BYR5	136 aa		4.95	□□□□□ -1.62
NPIPB4-218	ENST00000543654	GPR61	Q9BZJ8	451 aa		4.95	□□□□□ -1.62
NPIPB4-218	ENST00000543654	AGPAT4-IT1	Q9H0P7	198 aa		4.95	□□□□□ -1.62
NPIPB4-218	ENST00000543654	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.94	□□□□□ -1.62
NPIPB4-218	ENST00000543654	IZUMO1R	A6ND01	250 aa		4.94	□□□□□ -1.62
NPIPB4-218	ENST00000543654	HIGD1C	A8MV81	97 aa		4.94	□□□□□ -1.62
NPIPB4-218	ENST00000543654	OR11H12	B2RN74	326 aa		4.94	□□□□□ -1.62
NPIPB4-218	ENST00000543654	PRAC2	D3DTV9	90 aa		4.94	□□□□□ -1.62
NPIPB4-218	ENST00000543654	SH2D1A	O60880	128 aa		4.94	□□□□□ -1.62
NPIPB4-218	ENST00000543654	IGLV1-51	P01701	117 aa		4.94	□□□□□ -1.62
NPIPB4-218	ENST00000543654	GPX1	P07203	203 aa		4.94	□□□□□ -1.62
NPIPB4-218	ENST00000543654	CXCL1	P09341	107 aa		4.94	□□□□□ -1.62
NPIPB4-218	ENST00000543654	MED14OS	P0DP75	135 aa		4.94	□□□□□ -1.62
NPIPB4-218	ENST00000543654	HLA-DRB4	P13762	266 aa		4.94	□□□□□ -1.62
NPIPB4-218	ENST00000543654	CRISP2	P16562	243 aa		4.94	□□□□□ -1.62
NPIPB4-218	ENST00000543654	EDN2	P20800	178 aa		4.94	□□□□□ -1.62
NPIPB4-218	ENST00000543654	RPS10	P46783	165 aa	Known RBP	4.94	□□□□□ -1.62
NPIPB4-218	ENST00000543654	ERCC8	Q13216	396 aa		4.94	□□□□□ -1.62
NPIPB4-218	ENST00000543654	C9orf66	Q5T8R8	295 aa		4.94	□□□□□ -1.62
NPIPB4-218	ENST00000543654	ADAMTSL5	Q6ZMM2	481 aa		4.94	□□□□□ -1.62
NPIPB4-218	ENST00000543654	LINC00482	Q8N8I6	264 aa		4.94	□□□□□ -1.62
NPIPB4-218	ENST00000543654	TMEM158	Q8WZ71	300 aa		4.94	□□□□□ -1.62
NPIPB4-218	ENST00000543654	C8orf49	Q96NF6	230 aa		4.94	□□□□□ -1.62
NPIPB4-218	ENST00000543654	SRD5A3	Q9H8P0	318 aa		4.94	□□□□□ -1.62
NPIPB4-218	ENST00000543654	HLA-DRB4	X5D2U9	266 aa		4.94	□□□□□ -1.62
NPIPB4-218	ENST00000543654	AMBP	P02760	352 aa		4.93	□□□□□ -1.62
NPIPB4-218	ENST00000543654	ORM1	P02763	201 aa		4.93	□□□□□ -1.62
NPIPB4-218	ENST00000543654	DEFB131A	P59861	70 aa		4.93	□□□□□ -1.62
NPIPB4-218	ENST00000543654	NUTF2	P61970	127 aa	Known RBP	4.93	□□□□□ -1.62
NPIPB4-218	ENST00000543654	APRG1	Q8IVJ8	170 aa		4.93	□□□□□ -1.62
NPIPB4-218	ENST00000543654	C3orf56	Q8N813	242 aa		4.93	□□□□□ -1.62
NPIPB4-218	ENST00000543654	FAM19A4	Q96LR4	140 aa		4.93	□□□□□ -1.62
NPIPB4-218	ENST00000543654	CLUHP3	Q96NS8	147 aa		4.93	□□□□□ -1.62
NPIPB4-218	ENST00000543654	NEU1	Q99519	415 aa		4.93	□□□□□ -1.62
NPIPB4-218	ENST00000543654	ZNF747	Q9BV97	191 aa		4.93	□□□□□ -1.62
NPIPB4-218	ENST00000543654	ZMAT5	Q9UDW3	170 aa	Known RBP	4.93	□□□□□ -1.62
NPIPB4-218	ENST00000543654		A0A1B0GUT8	65 aa		4.92	□□□□□ -1.62
NPIPB4-218	ENST00000543654	C7orf71	A4D174	169 aa		4.92	□□□□□ -1.62
NPIPB4-218	ENST00000543654	KLLN	B2CW77	178 aa		4.92	□□□□□ -1.62
NPIPB4-218	ENST00000543654		F2Z2F3	143 aa		4.92	□□□□□ -1.62
NPIPB4-218	ENST00000543654	CA1	P00915	261 aa	Predicted RBP	4.92	□□□□□ -1.62
NPIPB4-218	ENST00000543654	HLA-DQA1	P01909	254 aa		4.92	□□□□□ -1.62
NPIPB4-218	ENST00000543654	CDKN1B	P46527	198 aa		4.92	□□□□□ -1.62
NPIPB4-218	ENST00000543654	FOXA3	P55318	350 aa	Predicted RBP	4.92	□□□□□ -1.62
NPIPB4-218	ENST00000543654	TCL1A	P56279	114 aa		4.92	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms