RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 NPBQ8NG41 125 aa18.33■□□□□ 0.52
SHD-201ENST00000543264 HLA-DRB4X5D2U9 266 aa18.33■□□□□ 0.52
SHD-201ENST00000543264 IGKV3D-20A0A0C4DH25 116 aa18.33■□□□□ 0.52
SHD-201ENST00000543264 NCBP2LA6PVI3 153 aaKnown RBP18.33■□□□□ 0.52
SHD-201ENST00000543264 PIP4P1Q86T03 277 aa18.33■□□□□ 0.52
SHD-201ENST00000543264 UFC1Q9Y3C8 167 aa18.33■□□□□ 0.52
SHD-201ENST00000543264 A0A087WX48 190 aa18.32■□□□□ 0.52
SHD-201ENST00000543264 KLRD1Q13241 179 aa18.32■□□□□ 0.52
SHD-201ENST00000543264 TAL2Q16559 108 aa18.32■□□□□ 0.52
SHD-201ENST00000543264 CACNA1HO95180 2353 aa18.32■□□□□ 0.52
SHD-201ENST00000543264 C11orf21Q9P2W6 132 aa18.32■□□□□ 0.52
SHD-201ENST00000543264 GVINP1Q7Z2Y8 2422 aa18.31■□□□□ 0.52
SHD-201ENST00000543264 INSL3P51460 131 aa18.31■□□□□ 0.52
SHD-201ENST00000543264 CCDC144NLQ6NUI1 221 aa18.31■□□□□ 0.52
SHD-201ENST00000543264 LCNL1Q6ZST4 164 aa18.31■□□□□ 0.52
SHD-201ENST00000543264 RRN3P1Q2M238 152 aa18.3■□□□□ 0.52
SHD-201ENST00000543264 NRACQ8N912 160 aa18.3■□□□□ 0.52
SHD-201ENST00000543264 SPATA25Q9BR10 227 aa18.3■□□□□ 0.52
SHD-201ENST00000543264 IGHV3-66A0A0C4DH42 116 aa18.29■□□□□ 0.52
SHD-201ENST00000543264 SPOCK3Q9BQ16 436 aa18.29■□□□□ 0.52
SHD-201ENST00000543264 ATMQ13315 3056 aa18.29■□□□□ 0.52
SHD-201ENST00000543264 ATP6V0BQ99437 205 aa18.29■□□□□ 0.52
SHD-201ENST00000543264 A0A1B0GV72 72 aa18.28■□□□□ 0.52
SHD-201ENST00000543264 B9A039 149 aa18.28■□□□□ 0.52
SHD-201ENST00000543264 ATP5G2Q06055 141 aa18.28■□□□□ 0.52
SHD-201ENST00000543264 LRBAP50851 2863 aa18.27■□□□□ 0.52
SHD-201ENST00000543264 PIEZO2Q9H5I5 2752 aa18.27■□□□□ 0.52
SHD-201ENST00000543264 KLK15Q9H2R5 256 aa18.27■□□□□ 0.52
SHD-201ENST00000543264 TRBV7-3A0A075B6L6 115 aa18.27■□□□□ 0.51
SHD-201ENST00000543264 PLNP26678 52 aa18.27■□□□□ 0.51
SHD-201ENST00000543264 PRO0461Q9UI25 63 aa18.27■□□□□ 0.51
SHD-201ENST00000543264 IGHV3OR16-13A0A075B7E8 117 aa18.26■□□□□ 0.51
SHD-201ENST00000543264 IGHV3-74A0A0B4J1X5 117 aa18.26■□□□□ 0.51
SHD-201ENST00000543264 ZNF672Q499Z4 452 aaPredicted RBP18.26■□□□□ 0.51
SHD-201ENST00000543264 ZNF502Q8TBZ5 544 aa18.26■□□□□ 0.51
SHD-201ENST00000543264 AGPAT4-IT1Q9H0P7 198 aa18.26■□□□□ 0.51
SHD-201ENST00000543264 CYSLTR1Q9Y271 337 aa18.26■□□□□ 0.51
SHD-201ENST00000543264 A0A1B0GWB2 263 aa18.26■□□□□ 0.51
SHD-201ENST00000543264 Q6ZQT7 251 aa18.26■□□□□ 0.51
SHD-201ENST00000543264 SCGB2A1O75556 95 aa18.25■□□□□ 0.51
SHD-201ENST00000543264 ACACAQ13085 2346 aa18.25■□□□□ 0.51
SHD-201ENST00000543264 SPANXN1Q5VSR9 72 aa18.25■□□□□ 0.51
SHD-201ENST00000543264 DCHS2Q6V1P9 2916 aa18.24■□□□□ 0.51
SHD-201ENST00000543264 OR11H12B2RN74 326 aa18.24■□□□□ 0.51
SHD-201ENST00000543264 NDUFS8O00217 210 aa18.24■□□□□ 0.51
SHD-201ENST00000543264 OR11H1Q8NG94 326 aa18.24■□□□□ 0.51
SHD-201ENST00000543264 OR11H6Q8NGC7 330 aa18.24■□□□□ 0.51
SHD-201ENST00000543264 OR11H2Q8NH07 326 aa18.24■□□□□ 0.51
SHD-201ENST00000543264 H7C1H1 209 aa18.24■□□□□ 0.51
SHD-201ENST00000543264 ABCA4P78363 2273 aa18.23■□□□□ 0.51
SHD-201ENST00000543264 IGHV7-4-1A0A0J9YVY3 117 aa18.23■□□□□ 0.51
SHD-201ENST00000543264 MYMXA0A1B0GTQ4 84 aa18.23■□□□□ 0.51
SHD-201ENST00000543264 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.23■□□□□ 0.51
SHD-201ENST00000543264 F8VRH5 84 aa18.23■□□□□ 0.51
SHD-201ENST00000543264 HOXA3O43365 443 aaPredicted RBP18.23■□□□□ 0.51
SHD-201ENST00000543264 LY6HO94772 140 aa18.23■□□□□ 0.51
SHD-201ENST00000543264 LY6G5BQ8NDX9 201 aa18.23■□□□□ 0.51
SHD-201ENST00000543264 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.22■□□□□ 0.51
SHD-201ENST00000543264 PRSS47A8MTI9 375 aa18.22■□□□□ 0.51
SHD-201ENST00000543264 CACNA1BQ00975 2339 aa18.22■□□□□ 0.51
SHD-201ENST00000543264 BUB3O43684 328 aa18.22■□□□□ 0.51
SHD-201ENST00000543264 CD3EP07766 207 aa18.22■□□□□ 0.51
SHD-201ENST00000543264 OTOGLQ3ZCN5 2332 aa18.21■□□□□ 0.51
SHD-201ENST00000543264 IGHV3-49A0A0A0MS15 119 aa18.21■□□□□ 0.51
SHD-201ENST00000543264 RBAKDNA6NC62 111 aa18.21■□□□□ 0.51
SHD-201ENST00000543264 APOMO95445 188 aa18.21■□□□□ 0.51
SHD-201ENST00000543264 RAB9AP51151 201 aa18.21■□□□□ 0.51
SHD-201ENST00000543264 CKS1BP61024 79 aa18.21■□□□□ 0.51
SHD-201ENST00000543264 TMEM78Q5T7P6 136 aa18.21■□□□□ 0.51
SHD-201ENST00000543264 C20orf78Q9BR46 151 aa18.21■□□□□ 0.51
SHD-201ENST00000543264 ANKRD11Q6UB99 2663 aaPredicted RBP18.21■□□□□ 0.5
SHD-201ENST00000543264 BSNQ9UPA5 3926 aa18.2■□□□□ 0.5
SHD-201ENST00000543264 MORN3Q6PF18 240 aaPredicted RBP18.2■□□□□ 0.5
SHD-201ENST00000543264 SCGB3A1Q96QR1 104 aa18.2■□□□□ 0.5
SHD-201ENST00000543264 PGPEP1Q9NXJ5 209 aa18.2■□□□□ 0.5
SHD-201ENST00000543264 CLEC3BP05452 202 aa18.2■□□□□ 0.5
SHD-201ENST00000543264 SCGB2A2Q13296 93 aa18.19■□□□□ 0.5
SHD-201ENST00000543264 SFTA2Q6UW10 78 aa18.19■□□□□ 0.5
SHD-201ENST00000543264 CLUHP3Q96NS8 147 aa18.19■□□□□ 0.5
SHD-201ENST00000543264 H3BVH4 76 aa18.18■□□□□ 0.5
SHD-201ENST00000543264 C15orf32Q32M92 178 aa18.18■□□□□ 0.5
SHD-201ENST00000543264 SMIM2Q9BVW6 85 aa18.18■□□□□ 0.5
SHD-201ENST00000543264 MRPL16Q9NX20 251 aaKnown RBP18.18■□□□□ 0.5
SHD-201ENST00000543264 TRAV12-1A0A0B4J245 112 aa18.18■□□□□ 0.5
SHD-201ENST00000543264 LGALS1P09382 135 aaKnown RBP18.18■□□□□ 0.5
SHD-201ENST00000543264 RAXQ9Y2V3 346 aa18.18■□□□□ 0.5
SHD-201ENST00000543264 SPRY2O43597 315 aa18.17■□□□□ 0.5
SHD-201ENST00000543264 Q5PR19 223 aa18.17■□□□□ 0.5
SHD-201ENST00000543264 SLC50A1Q9BRV3 221 aa18.17■□□□□ 0.5
SHD-201ENST00000543264 LINC01560Q8TB33 94 aa18.17■□□□□ 0.5
SHD-201ENST00000543264 ZFAND3Q9H8U3 227 aa18.17■□□□□ 0.5
SHD-201ENST00000543264 AKAP13Q12802 2813 aa18.16■□□□□ 0.5
SHD-201ENST00000543264 IGHV7-81A0A0B4J1V7 117 aa18.16■□□□□ 0.5
SHD-201ENST00000543264 ODF3BA8MYP8 253 aa18.16■□□□□ 0.5
SHD-201ENST00000543264 FOXI1Q12951 378 aa18.16■□□□□ 0.5
SHD-201ENST00000543264 MED13LQ71F56 2210 aa18.15■□□□□ 0.5
SHD-201ENST00000543264 TRAV8-2A0A0B4J237 113 aa18.15■□□□□ 0.5
SHD-201ENST00000543264 LINC01619G3V211 115 aa18.15■□□□□ 0.5
SHD-201ENST00000543264 J3KRW8 73 aa18.15■□□□□ 0.5
SHD-201ENST00000543264 WFDC12Q8WWY7 111 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 288 ms