RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 ZFAND2AQ8N6M9 145 aa10.71□□□□□ -0.69
LDB3-207ENST00000542786 OVOL1O14753 267 aa10.7□□□□□ -0.7
LDB3-207ENST00000542786 ORM1P02763 201 aa10.7□□□□□ -0.7
LDB3-207ENST00000542786 ZNF705DP0CH99 300 aaPredicted RBP10.7□□□□□ -0.7
LDB3-207ENST00000542786 ZNF705BP0CI00 300 aaPredicted RBP10.7□□□□□ -0.7
LDB3-207ENST00000542786 KRTAP1-1Q07627 177 aa10.7□□□□□ -0.7
LDB3-207ENST00000542786 DMRTA1Q5VZB9 504 aa10.7□□□□□ -0.7
LDB3-207ENST00000542786 RNASEKQ6P5S7 137 aaKnown RBP10.7□□□□□ -0.7
LDB3-207ENST00000542786 Q6ZQT7 251 aa10.7□□□□□ -0.7
LDB3-207ENST00000542786 BORCS7Q96B45 105 aa10.7□□□□□ -0.7
LDB3-207ENST00000542786 TEX15Q9BXT5 2789 aa10.7□□□□□ -0.7
LDB3-207ENST00000542786 KIR2DL5BA0A0G2JN68 375 aa10.7□□□□□ -0.7
LDB3-207ENST00000542786 KIR2DL5BA0A0G2JPC4 375 aa10.7□□□□□ -0.7
LDB3-207ENST00000542786 DEFB1P60022 68 aa10.7□□□□□ -0.7
LDB3-207ENST00000542786 FAM104BQ5XKR9 115 aa10.7□□□□□ -0.7
LDB3-207ENST00000542786 REC114Q7Z4M0 266 aa10.7□□□□□ -0.7
LDB3-207ENST00000542786 KIR2DL5AQ8N109 375 aa10.7□□□□□ -0.7
LDB3-207ENST00000542786 CHCHD1Q96BP2 118 aaKnown RBP10.7□□□□□ -0.7
LDB3-207ENST00000542786 LINC00477Q96M19 166 aa10.7□□□□□ -0.7
LDB3-207ENST00000542786 UFC1Q9Y3C8 167 aa10.7□□□□□ -0.7
LDB3-207ENST00000542786 MUC21A0A0G2JKD1 596 aa10.69□□□□□ -0.7
LDB3-207ENST00000542786 MUC21A0A140T8X8 626 aa10.69□□□□□ -0.7
LDB3-207ENST00000542786 FAM181BA6NEQ2 426 aa10.69□□□□□ -0.7
LDB3-207ENST00000542786 C3orf79P0CE67 100 aa10.69□□□□□ -0.7
LDB3-207ENST00000542786 MUC21Q5SSG8 566 aa10.69□□□□□ -0.7
LDB3-207ENST00000542786 APRG1Q8IVJ8 170 aa10.69□□□□□ -0.7
LDB3-207ENST00000542786 DCANP1Q8TF63 244 aa10.69□□□□□ -0.7
LDB3-207ENST00000542786 UBE2E2Q96LR5 201 aa10.69□□□□□ -0.7
LDB3-207ENST00000542786 PDZD2O15018 2839 aa10.68□□□□□ -0.7
LDB3-207ENST00000542786 TSTD3H0UI37 97 aa10.68□□□□□ -0.7
LDB3-207ENST00000542786 HSBP1O75506 76 aa10.68□□□□□ -0.7
LDB3-207ENST00000542786 NTF3P20783 257 aa10.68□□□□□ -0.7
LDB3-207ENST00000542786 DDTP30046 118 aa10.68□□□□□ -0.7
LDB3-207ENST00000542786 IGHV4OR15-8A0A075B7B6 117 aa10.68□□□□□ -0.7
LDB3-207ENST00000542786 A0A087WW49 117 aa10.68□□□□□ -0.7
LDB3-207ENST00000542786 LGALS9O00182 355 aa10.68□□□□□ -0.7
LDB3-207ENST00000542786 KRTDAPP60985 99 aa10.68□□□□□ -0.7
LDB3-207ENST00000542786 TDRG1Q3Y452 100 aa10.68□□□□□ -0.7
LDB3-207ENST00000542786 EBLN2Q6P2I7 272 aa10.68□□□□□ -0.7
LDB3-207ENST00000542786 AMN1Q8IY45 258 aa10.68□□□□□ -0.7
LDB3-207ENST00000542786 TMEM86BQ8N661 226 aa10.68□□□□□ -0.7
LDB3-207ENST00000542786 OR8A1Q8NGG7 326 aa10.68□□□□□ -0.7
LDB3-207ENST00000542786 MSRB1Q9NZV6 116 aa10.68□□□□□ -0.7
LDB3-207ENST00000542786 IGHV1-24A0A0C4DH33 117 aa10.67□□□□□ -0.7
LDB3-207ENST00000542786 C2orf70A6NJV1 201 aa10.67□□□□□ -0.7
LDB3-207ENST00000542786 MRPL51Q4U2R6 128 aaKnown RBP10.67□□□□□ -0.7
LDB3-207ENST00000542786 RNF185Q96GF1 192 aa10.67□□□□□ -0.7
LDB3-207ENST00000542786 SELENOKQ9Y6D0 94 aa10.67□□□□□ -0.7
LDB3-207ENST00000542786 TRBV7-9A0A0J9YWB2 115 aa10.66□□□□□ -0.7
LDB3-207ENST00000542786 M0R2Z0 102 aa10.66□□□□□ -0.7
LDB3-207ENST00000542786 LINC00614P0C842 121 aa10.66□□□□□ -0.7
LDB3-207ENST00000542786 OR10J6PQ8NGY7 276 aa10.66□□□□□ -0.7
LDB3-207ENST00000542786 DUX5Q96PT3 197 aa10.66□□□□□ -0.7
LDB3-207ENST00000542786 TMEM191AQ9H0A3 160 aa10.66□□□□□ -0.7
LDB3-207ENST00000542786 F6UB75 175 aa10.66□□□□□ -0.7
LDB3-207ENST00000542786 D6R8Y8 96 aa10.65□□□□□ -0.7
LDB3-207ENST00000542786 SNAI2O43623 268 aa10.65□□□□□ -0.7
LDB3-207ENST00000542786 SRD5A1P18405 259 aa10.65□□□□□ -0.7
LDB3-207ENST00000542786 HOXD3P31249 432 aaPredicted RBP10.65□□□□□ -0.7
LDB3-207ENST00000542786 RPL11P62913 178 aaKnown RBP10.65□□□□□ -0.7
LDB3-207ENST00000542786 TWIST1Q15672 202 aa10.65□□□□□ -0.7
LDB3-207ENST00000542786 TCTEX1D4Q5JR98 221 aa10.65□□□□□ -0.7
LDB3-207ENST00000542786 SAMD13Q5VXD3 122 aa10.65□□□□□ -0.7
LDB3-207ENST00000542786 HELZ2Q9BYK8 2649 aaKnown RBP10.65□□□□□ -0.71
LDB3-207ENST00000542786 IGKV3-7A0A075B6H7 116 aa10.64□□□□□ -0.71
LDB3-207ENST00000542786 IGHV4-4A0A075B6R2 117 aa10.64□□□□□ -0.71
LDB3-207ENST00000542786 SYNJ2BPP57105 145 aa10.64□□□□□ -0.71
LDB3-207ENST00000542786 SSTP61278 116 aa10.64□□□□□ -0.71
LDB3-207ENST00000542786 PMCHL1Q16048 86 aa10.64□□□□□ -0.71
LDB3-207ENST00000542786 ADAMTSL5Q6ZMM2 481 aa10.64□□□□□ -0.71
LDB3-207ENST00000542786 C18orf65Q6ZTR6 163 aa10.64□□□□□ -0.71
LDB3-207ENST00000542786 TEX29Q8N6K0 151 aa10.64□□□□□ -0.71
LDB3-207ENST00000542786 C20orf144Q9BQM9 153 aa10.64□□□□□ -0.71
LDB3-207ENST00000542786 OR5AL1P0C617 328 aa10.64□□□□□ -0.71
LDB3-207ENST00000542786 LINC00173Q6ZV60 143 aa10.64□□□□□ -0.71
LDB3-207ENST00000542786 SPATA12Q7Z6I5 190 aa10.64□□□□□ -0.71
LDB3-207ENST00000542786 C14orf144Q96I85 54 aa10.64□□□□□ -0.71
LDB3-207ENST00000542786 MS4A6AQ9H2W1 248 aa10.64□□□□□ -0.71
LDB3-207ENST00000542786 K7EQG2 157 aa10.63□□□□□ -0.71
LDB3-207ENST00000542786 RAB4AP20338 218 aa10.63□□□□□ -0.71
LDB3-207ENST00000542786 KIR3DS1Q14943 382 aa10.63□□□□□ -0.71
LDB3-207ENST00000542786 ORMDL3Q8N138 153 aa10.63□□□□□ -0.71
LDB3-207ENST00000542786 OR10AG1Q8NH19 301 aa10.63□□□□□ -0.71
LDB3-207ENST00000542786 PRELID3AQ96N28 172 aa10.63□□□□□ -0.71
LDB3-207ENST00000542786 FOXC2Q99958 501 aa10.63□□□□□ -0.71
LDB3-207ENST00000542786 TLN2Q9Y4G6 2542 aa10.63□□□□□ -0.71
LDB3-207ENST00000542786 FLNAP21333 2647 aaKnown RBP10.63□□□□□ -0.71
LDB3-207ENST00000542786 KLLNB2CW77 178 aa10.62□□□□□ -0.71
LDB3-207ENST00000542786 KLHDC1Q8N7A1 406 aa10.62□□□□□ -0.71
LDB3-207ENST00000542786 NDUFAF3Q9BU61 184 aa10.62□□□□□ -0.71
LDB3-207ENST00000542786 CCDC168Q8NDH2 2452 aa10.62□□□□□ -0.71
LDB3-207ENST00000542786 TRAV21A0A0B4J279 112 aa10.61□□□□□ -0.71
LDB3-207ENST00000542786 DNAJC9-AS1A6NH13 148 aa10.61□□□□□ -0.71
LDB3-207ENST00000542786 NPYP01303 97 aa10.61□□□□□ -0.71
LDB3-207ENST00000542786 CSN3P07498 182 aa10.61□□□□□ -0.71
LDB3-207ENST00000542786 ID1P41134 155 aa10.61□□□□□ -0.71
LDB3-207ENST00000542786 ESM1Q9NQ30 184 aa10.61□□□□□ -0.71
LDB3-207ENST00000542786 SIGLEC8Q9NYZ4 499 aa10.61□□□□□ -0.71
LDB3-207ENST00000542786 NBPF19A0A087WUL8 3843 aa10.61□□□□□ -0.71
LDB3-207ENST00000542786 A0A096LNJ9 63 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms